Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:42:49 (691462): wrapper (7.7.26015): starting
16:42:49 (691462): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 16:42:49] Arguments: --nthreads 4
[2025-10-24 16:42:49] Threads: 4
[2025-10-24 16:42:49] Checking for CVMFS
[2025-10-24 16:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 16:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 16:42:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 16:42:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 16:42:50] 2.9.2.0 3124 2139 90920 152085 0 57 30628222 36864000 0 130560 0 1771697 99.990 89076 1034 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-24 16:42:50] CVMFS is ok
[2025-10-24 16:42:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 16:42:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 16:42:50] Further information can be found at the LHC@home message board.
[2025-10-24 16:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 16:42:50] Checking for apptainer binary...
[2025-10-24 16:42:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 16:42:50] Running /usr/bin/apptainer --version
[2025-10-24 16:42:50] apptainer version 1.4.1-1.1
[2025-10-24 16:42:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 16:42:50] belleA267b
[2025-10-24 16:42:50] apptainer works
[2025-10-24 16:42:50] Set ATHENA_PROC_NUMBER=4
[2025-10-24 16:42:50] Set ATHENA_CORE_NUMBER=4
[2025-10-24 16:42:50] Starting ATLAS job with PandaID=6855197525
[2025-10-24 16:42:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 18:01:09]  *** The last 200 lines of the pilot log: ***
[2025-10-24 18:01:09]  status_code=0
[2025-10-24 18:01:09]  storage_token=
[2025-10-24 18:01:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6855197525/log.46771637._112857.job.log.tgz.1
[2025-10-24 18:01:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/61/log.46771637._112857.job.log.tgz.1
[2025-10-24 18:01:09]  workdir=None
[2025-10-24 18:01:09] ]
[2025-10-24 18:01:09] 2025-10-24 16:00:20,333 | INFO     | transferring file log.46771637._112857.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6855197525/log.46771637._112857.job.log.tgz.1 to /local/data/boinc/
[2025-10-24 18:01:09] 2025-10-24 16:00:20,333 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6855197525/log.46771637._112857.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._1128
[2025-10-24 18:01:09] 2025-10-24 16:00:20,351 | INFO     | adding to output.list: log.46771637._112857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/61/log.46771637._112857.job.log.tg
[2025-10-24 18:01:09] 2025-10-24 16:00:20,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 18:01:09] 2025-10-24 16:00:20,351 | INFO     | summary of transferred files:
[2025-10-24 18:01:09] 2025-10-24 16:00:20,351 | INFO     |  -- lfn=log.46771637._112857.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 18:01:09] 2025-10-24 16:00:20,351 | INFO     | stage-out finished correctly
[2025-10-24 18:01:09] 2025-10-24 16:00:20,441 | INFO     | monitor loop #357: job 0:6855197525 is in state 'finished'
[2025-10-24 18:01:09] 2025-10-24 16:00:20,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:01:09] 2025-10-24 16:00:21,923 | INFO     | time since job start (4643s) is within the limit (172800.0s)
[2025-10-24 18:01:09] 2025-10-24 16:00:22,945 | INFO     | monitor loop #358: job 0:6855197525 is in state 'finished'
[2025-10-24 18:01:09] 2025-10-24 16:00:22,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:01:09] 2025-10-24 16:00:22,985 | INFO     | PID=695253 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 18:01:09] 2025-10-24 16:00:23,479 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 18:01:09] 2025-10-24 16:00:23,520 | INFO     | job 6855197525 has state=finished
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | preparing for final server update for job 6855197525 in state='finished'
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | this job has now completed (state=finished)
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | log transfer has been attempted: DONE
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | job 6855197525 has finished - writing final server update
[2025-10-24 18:01:09] 2025-10-24 16:00:23,521 | INFO     | total number of processed events: 400 (read)
[2025-10-24 18:01:09] 2025-10-24 16:00:23,522 | INFO     | executing command: lscpu
[2025-10-24 18:01:09] 2025-10-24 16:00:23,540 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 18:01:09] 2025-10-24 16:00:23,986 | INFO     | time since job start (4645s) is within the limit (172800.0s)
[2025-10-24 18:01:09] 2025-10-24 16:00:25,448 | INFO     | monitor loop #359: job 0:6855197525 is in state 'finished'
[2025-10-24 18:01:09] 2025-10-24 16:00:25,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:01:09] 2025-10-24 16:00:25,991 | INFO     | time since job start (4647s) is within the limit (172800.0s)
[2025-10-24 18:01:09] 2025-10-24 16:00:27,952 | INFO     | monitor loop #360: job 0:6855197525 is in state 'finished'
[2025-10-24 18:01:09] 2025-10-24 16:00:27,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:01:09] 2025-10-24 16:00:27,997 | INFO     | time since job start (4649s) is within the limit (172800.0s)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,092 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 18:01:09] 2025-10-24 16:00:29,093 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3333.6422500000003
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6855197525/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | INFO     | extracted standard info from prmon json
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 18:01:09] 2025-10-24 16:00:29,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | fitting pss+swap vs Time
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | sum of square deviations: 101843770.0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | sum of deviations: -10113884668.0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | mean x: 1761319381.0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | mean y: 2524316.913043478
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | -- intersect: 174915345031.88806
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | intersect: 174915345031.88806
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | chi2: 0.05186452899884416
[2025-10-24 18:01:09] 2025-10-24 16:00:29,096 | INFO     | -- intersect: 174915345031.88806
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | current memory leak: -99.31 B/s (using 69 data points, chi2=0.05)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | could have reported an average CPU frequency of 3703 MHz (6 samples)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | ..............................
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . Timing measurements:
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . get job = 0 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . initial setup = 1 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . payload setup = 4 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . stage-in = 0 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . payload execution = 4618 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . stage-out = 0 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | . log creation = 0 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,097 | INFO     | ..............................
[2025-10-24 18:01:09] 2025-10-24 16:00:29,171 | INFO     | 
[2025-10-24 18:01:09] 2025-10-24 16:00:29,171 | INFO     | job summary report
[2025-10-24 18:01:09] 2025-10-24 16:00:29,171 | INFO     | --------------------------------------------------
[2025-10-24 18:01:09] 2025-10-24 16:00:29,171 | INFO     | PanDA job id: 6855197525
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | task id: 46771637
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | errors: (none)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | pilot state: finished 
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | transexitcode: 0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | exeerrorcode: 0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | exeerrordiag: 
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | exitcode: 0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | exitmsg: OK
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | cpuconsumptiontime: 17373 s
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | nevents: 400
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | neventsw: 0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | pid: 701825
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | pgrp: 701825
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | corecount: 4
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | event service: False
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | sizes: {0: 2348937, 3: 2349199, 10: 2349227, 4625: 2375533, 4626: 2375532, 4627: 2384592, 4630: 2384776, 4636: 2384970}
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | --------------------------------------------------
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | 
[2025-10-24 18:01:09] 2025-10-24 16:00:29,172 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 18:01:09] 2025-10-24 16:00:29,193 | INFO     | job 6855197525 has completed (purged errors)
[2025-10-24 18:01:09] 2025-10-24 16:00:29,194 | INFO     | overall cleanup function is called
[2025-10-24 18:01:09] 2025-10-24 16:00:30,200 | INFO     | --- collectZombieJob: --- 10, [701825]
[2025-10-24 18:01:09] 2025-10-24 16:00:30,200 | INFO     | zombie collector waiting for pid 701825
[2025-10-24 18:01:09] 2025-10-24 16:00:30,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 18:01:09] 2025-10-24 16:00:30,201 | INFO     | collected zombie processes
[2025-10-24 18:01:09] 2025-10-24 16:00:30,201 | INFO     | will attempt to kill all subprocesses of pid=701825
[2025-10-24 18:01:09] 2025-10-24 16:00:30,244 | INFO     | process IDs to be killed: [701825] (in reverse order)
[2025-10-24 18:01:09] 2025-10-24 16:00:30,278 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 18:01:09] 2025-10-24 16:00:30,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 18:01:09] 2025-10-24 16:00:30,280 | INFO     | did not find any defunct processes belonging to 701825
[2025-10-24 18:01:09] 2025-10-24 16:00:30,281 | INFO     | did not find any defunct processes belonging to 701825
[2025-10-24 18:01:09] 2025-10-24 16:00:30,281 | INFO     | ready for new job
[2025-10-24 18:01:09] 2025-10-24 16:00:30,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 18:01:09] 2025-10-24 16:00:30,282 | INFO     | ***************************************
[2025-10-24 18:01:09] 2025-10-24 16:00:30,282 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 18:01:09] 2025-10-24 16:00:30,282 | INFO     | ***************************************
[2025-10-24 18:01:09] 2025-10-24 16:00:30,282 | INFO     | 
[2025-10-24 18:01:09] 2025-10-24 16:00:30,283 | INFO     | architecture information:
[2025-10-24 18:01:09] 2025-10-24 16:00:30,283 | INFO     | executing command: cat /etc/os-release
[2025-10-24 18:01:09] 2025-10-24 16:00:30,297 | INFO     | cat /etc/os-release:
[2025-10-24 18:01:09] NAME="CentOS Linux"
[2025-10-24 18:01:09] VERSION="7 (Core)"
[2025-10-24 18:01:09] ID="centos"
[2025-10-24 18:01:09] ID_LIKE="rhel fedora"
[2025-10-24 18:01:09] VERSION_ID="7"
[2025-10-24 18:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 18:01:09] ANSI_COLOR="0;31"
[2025-10-24 18:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 18:01:09] HOME_URL="https://www.centos.org/"
[2025-10-24 18:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 18:01:09] 
[2025-10-24 18:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 18:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 18:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 18:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 18:01:09] 
[2025-10-24 18:01:09] 2025-10-24 16:00:30,297 | INFO     | ***************************************
[2025-10-24 18:01:09] 2025-10-24 16:00:30,801 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-24 18:01:09] 2025-10-24 16:00:30,818 | INFO     | sufficient remaining disk space (328809316352 B)
[2025-10-24 18:01:09] 2025-10-24 16:00:30,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 18:01:09] 2025-10-24 16:00:30,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 18:01:09] 2025-10-24 16:00:30,819 | INFO     | update_server=False
[2025-10-24 18:01:09] 2025-10-24 16:00:30,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 18:01:09] 2025-10-24 16:00:30,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 18:01:09] 2025-10-24 16:00:30,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 18:01:09] 2025-10-24 16:00:30,983 | INFO     | all payload control threads have been joined
[2025-10-24 18:01:09] 2025-10-24 16:00:31,016 | INFO     | all job control threads have been joined
[2025-10-24 18:01:09] 2025-10-24 16:00:31,438 | INFO     | all data control threads have been joined
[2025-10-24 18:01:09] 2025-10-24 16:00:31,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 18:01:09] 2025-10-24 16:00:31,461 | INFO     | aborting loop
[2025-10-24 18:01:09] 2025-10-24 16:00:31,824 | INFO     | [job] retrieve thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:31,825 | INFO     | [job] queue monitor thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:31,989 | INFO     | [payload] control thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,021 | INFO     | [job] control thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,215 | INFO     | [job] validate thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,386 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,444 | INFO     | [data] control thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,466 | INFO     | [job] job monitor thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,566 | INFO     | [payload] validate_post thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,859 | INFO     | [payload] failed_post thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,914 | INFO     | [data] copytool_out thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:32,919 | INFO     | [data] copytool_in thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:33,217 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:34,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 18:01:09] 2025-10-24 16:00:38,039 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:00:41,432 | INFO     | job.realtimelogging is not enabled
[2025-10-24 18:01:09] 2025-10-24 16:00:42,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 18:01:09] 2025-10-24 16:01:01,113 | INFO     | PID=695253 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 18:01:09] 2025-10-24 16:01:01,113 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 18:01:09] 2025-10-24 16:01:01,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 18:01:09] 2025-10-24 16:01:01,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 18:01:09] 2025-10-24 16:01:03,601 | INFO     | [monitor] cgroup control has ended
[2025-10-24 18:01:09] 2025-10-24 16:01:04,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861536118592)>', '<ExcThread(monitor, started 139860224497408)>']
[2025-10-24 18:01:09] 2025-10-24 16:01:05,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 18:01:09] 2025-10-24 16:01:05,134 | INFO     | [monitor] control thread has ended
[2025-10-24 18:01:09] 2025-10-24 16:01:09,316 | INFO     | all workflow threads have been joined
[2025-10-24 18:01:09] 2025-10-24 16:01:09,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 18:01:09] 2025-10-24 16:01:09,317 | INFO     | traces error code: 0
[2025-10-24 18:01:09] 2025-10-24 16:01:09,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 18:01:09] 2025-10-24 16:01:09,394 [wrapper] ==== pilot stdout END ====
[2025-10-24 18:01:09] 2025-10-24 16:01:09,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 18:01:09] 2025-10-24 16:01:09,402 [wrapper] pilotpid: 695253
[2025-10-24 18:01:09] 2025-10-24 16:01:09,407 [wrapper] Pilot exit status: 0
[2025-10-24 18:01:09] 2025-10-24 16:01:09,419 [wrapper] pandaids: 6855197525
[2025-10-24 18:01:09] 2025-10-24 16:01:09,441 [wrapper] cleanup supervisor_pilot  713984 695254
[2025-10-24 18:01:09] 2025-10-24 16:01:09,445 [wrapper] Test setup, not cleaning
[2025-10-24 18:01:09] 2025-10-24 16:01:09,449 [wrapper] apfmon messages muted
[2025-10-24 18:01:09] 2025-10-24 16:01:09,453 [wrapper] ==== wrapper stdout END ====
[2025-10-24 18:01:09] 2025-10-24 16:01:09,457 [wrapper] ==== wrapper stderr END ====
[2025-10-24 18:01:09]  *** Error codes and diagnostics ***
[2025-10-24 18:01:09]     "exeErrorCode": 0,
[2025-10-24 18:01:09]     "exeErrorDiag": "",
[2025-10-24 18:01:09]     "pilotErrorCode": 0,
[2025-10-24 18:01:09]     "pilotErrorDiag": "",
[2025-10-24 18:01:09]  *** Listing of results directory ***
[2025-10-24 18:01:09] total 427728
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc      5112 Oct 24 00:28 queuedata.json
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc    557409 Oct 24 00:28 pilot3.tar.gz
[2025-10-24 18:01:09] -rwx------ 1 boinc boinc     36292 Oct 24 00:29 runpilot2-wrapper.sh
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc       100 Oct 24 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 18:01:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 16:42 run_atlas
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc       105 Oct 24 16:42 job.xml
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc 228186891 Oct 24 16:42 EVNT.46771634._004506.pool.root.1
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc    569685 Oct 24 16:42 input.tar.gz
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc     15120 Oct 24 16:42 start_atlas.sh
[2025-10-24 18:01:09] drwxrwx--x 2 boinc boinc      4096 Oct 24 16:42 shared
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc         0 Oct 24 16:42 boinc_setup_complete
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc      6378 Oct 24 16:42 init_data.xml
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc         0 Oct 24 16:42 boinc_lockfile
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc      2561 Oct 24 16:42 pandaJob.out
[2025-10-24 18:01:09] -rw------- 1 boinc boinc    978655 Oct 24 16:42 agis_schedconf.cvmfs.json
[2025-10-24 18:01:09] -rw------- 1 boinc boinc   1560772 Oct 24 16:42 agis_ddmendpoints.agis.ALL.json
[2025-10-24 18:01:09] drwx------ 5 boinc boinc      4096 Oct 24 16:42 pilot3
[2025-10-24 18:01:09] -rw------- 1 boinc boinc 204015035 Oct 24 17:59 HITS.46771637._112857.pool.root.1
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc       529 Oct 24 18:00 boinc_task_state.xml
[2025-10-24 18:01:09] -rw------- 1 boinc boinc      1025 Oct 24 18:00 memory_monitor_summary.json
[2025-10-24 18:01:09] -rw------- 1 boinc boinc    254069 Oct 24 18:00 log.46771637._112857.job.log.tgz.1
[2025-10-24 18:01:09] -rw------- 1 boinc boinc        95 Oct 24 18:00 pilot_heartbeat.json
[2025-10-24 18:01:09] -rw------- 1 boinc boinc      7776 Oct 24 18:00 heartbeat.json
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc      8192 Oct 24 18:00 boinc_mmap_file
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc        27 Oct 24 18:00 wrapper_checkpoint.txt
[2025-10-24 18:01:09] -rw------- 1 boinc boinc      4823 Oct 24 18:01 pilotlog.txt
[2025-10-24 18:01:09] -rw------- 1 boinc boinc    685238 Oct 24 18:01 log.46771637._112857.job.log.1
[2025-10-24 18:01:09] -rw------- 1 boinc boinc       357 Oct 24 18:01 output.list
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc       620 Oct 24 18:01 runtime_log
[2025-10-24 18:01:09] -rw------- 1 boinc boinc    962560 Oct 24 18:01 result.tar.gz
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc      8797 Oct 24 18:01 runtime_log.err
[2025-10-24 18:01:09] -rw------- 1 boinc boinc       662 Oct 24 18:01 jI2MDmSzIW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme09NDmssd5Nn.diag
[2025-10-24 18:01:09] -rw-r--r-- 1 boinc boinc     22196 Oct 24 18:01 stderr.txt
[2025-10-24 18:01:09] HITS file was successfully produced:
[2025-10-24 18:01:09] -rw------- 1 boinc boinc 204015035 Oct 24 17:59 shared/HITS.pool.root.1
[2025-10-24 18:01:09]  *** Contents of shared directory: ***
[2025-10-24 18:01:09] total 423600
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc 228186891 Oct 24 16:42 ATLAS.root_0
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc    569685 Oct 24 16:42 input.tar.gz
[2025-10-24 18:01:09] -rw-r--r-- 2 boinc boinc     15120 Oct 24 16:42 start_atlas.sh
[2025-10-24 18:01:09] -rw------- 1 boinc boinc 204015035 Oct 24 17:59 HITS.pool.root.1
[2025-10-24 18:01:09] -rw------- 1 boinc boinc    962560 Oct 24 18:01 result.tar.gz
18:01:11 (691462): run_atlas exited; CPU time 17386.759533
18:01:11 (691462): called boinc_finish(0)

</stderr_txt>
]]>

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