Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:25:49 (2905363): wrapper (7.7.26015): starting
22:25:49 (2905363): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 22:25:49] Arguments: --nthreads 8
[2025-10-23 22:25:49] Threads: 8
[2025-10-23 22:25:49] Checking for CVMFS
[2025-10-23 22:25:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 22:25:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 22:25:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 22:25:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 22:25:49] 2.13.2.0 129819 3316 68360 152058 0 57 5366856 39288832 3664 16776704 0 10555810 99.935 771028 17177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 22:25:49] CVMFS is ok
[2025-10-23 22:25:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 22:25:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 22:25:49] Further information can be found at the LHC@home message board.
[2025-10-23 22:25:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 22:25:49] Checking for apptainer binary...
[2025-10-23 22:25:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 22:25:49] Running /usr/bin/apptainer --version
[2025-10-23 22:25:49] apptainer version 1.4.3-1.el9
[2025-10-23 22:25:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 22:25:50] c-210-16.aglt2.org
[2025-10-23 22:25:50] apptainer works
[2025-10-23 22:25:50] Set ATHENA_PROC_NUMBER=8
[2025-10-23 22:25:50] Set ATHENA_CORE_NUMBER=8
[2025-10-23 22:25:50] Starting ATLAS job with PandaID=6855074801
[2025-10-23 22:25:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 00:19:16]  *** The last 200 lines of the pilot log: ***
[2025-10-24 00:19:16] 2025-10-24 04:18:29,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 00:19:16] 2025-10-24 04:18:29,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 00:19:16] 2025-10-24 04:18:29,239 | INFO     | fitting pss+swap vs Time
[2025-10-24 00:19:16] 2025-10-24 04:18:29,239 | INFO     | sum of square deviations: 424045160.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,240 | INFO     | sum of deviations: -17577003661.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,240 | INFO     | mean x: 1761276140.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,240 | INFO     | mean y: 2574725.603603604
[2025-10-24 00:19:16] 2025-10-24 04:18:29,240 | INFO     | -- intersect: 73008848776.25414
[2025-10-24 00:19:16] 2025-10-24 04:18:29,240 | INFO     | intersect: 73008848776.25414
[2025-10-24 00:19:16] 2025-10-24 04:18:29,241 | INFO     | chi2: 2.4784659722320557
[2025-10-24 00:19:16] 2025-10-24 04:18:29,241 | INFO     | sum of square deviations: 369281342.5
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | sum of deviations: -7974682011.999998
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | mean x: 1761275987.5
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | mean y: 2600622.4716981133
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | -- intersect: 38037600822.03846
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | intersect: 38037600822.03846
[2025-10-24 00:19:16] 2025-10-24 04:18:29,242 | INFO     | chi2: 1.4906964948994799
[2025-10-24 00:19:16] 2025-10-24 04:18:29,243 | INFO     | current chi2=1.4906964948994799 (change=39.854066523374975 %)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,243 | INFO     | sum of square deviations: 319447850.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,243 | INFO     | sum of deviations: -6882990205.000004
[2025-10-24 00:19:16] 2025-10-24 04:18:29,243 | INFO     | mean x: 1761275835.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | mean y: 2603964.792079208
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | -- intersect: 37951972916.901794
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | intersect: 37951972916.901794
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | chi2: 1.4907971024257247
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | current chi2=1.4907971024257247 (change=-0.006749028161607098 %)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,244 | INFO     | right removable region: 100
[2025-10-24 00:19:16] 2025-10-24 04:18:29,245 | INFO     | sum of square deviations: 369281342.5
[2025-10-24 00:19:16] 2025-10-24 04:18:29,245 | INFO     | sum of deviations: -32671681679.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,245 | INFO     | mean x: 1761276292.5
[2025-10-24 00:19:16] 2025-10-24 04:18:29,245 | INFO     | mean y: 2615775.0566037735
[2025-10-24 00:19:16] 2025-10-24 04:18:29,246 | INFO     | -- intersect: 155829222090.34668
[2025-10-24 00:19:16] 2025-10-24 04:18:29,246 | INFO     | intersect: 155829222090.34668
[2025-10-24 00:19:16] 2025-10-24 04:18:29,246 | INFO     | chi2: 1.1415176506525375
[2025-10-24 00:19:16] 2025-10-24 04:18:29,246 | INFO     | current chi2=1.1415176506525375 (change=53.942573210940225 %)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,246 | INFO     | sum of square deviations: 319447850.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,247 | INFO     | sum of deviations: -29418473049.999992
[2025-10-24 00:19:16] 2025-10-24 04:18:29,247 | INFO     | mean x: 1761276445.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,247 | INFO     | mean y: 2605687.712871287
[2025-10-24 00:19:16] 2025-10-24 04:18:29,247 | INFO     | -- intersect: 162201423525.52988
[2025-10-24 00:19:16] 2025-10-24 04:18:29,247 | INFO     | intersect: 162201423525.52988
[2025-10-24 00:19:16] 2025-10-24 04:18:29,248 | INFO     | chi2: 1.1355671029806271
[2025-10-24 00:19:16] 2025-10-24 04:18:29,248 | INFO     | current chi2=1.1355671029806271 (change=0.5212838950417295 %)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,248 | INFO     | left removable region: 20
[2025-10-24 00:19:16] 2025-10-24 04:18:29,248 | INFO     | sum of square deviations: 158737860.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | sum of deviations: -10931527509.0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | mean x: 1761276414.5
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | mean y: 2608814.575
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | -- intersect: 121293405956.85495
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | intersect: 121293405956.85495
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | chi2: 0.05804894337388078
[2025-10-24 00:19:16] 2025-10-24 04:18:29,249 | INFO     | -- intersect: 121293405956.85495
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | current memory leak: -68.87 B/s (using 80 data points, chi2=0.06)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | could have reported an average CPU frequency of 2605 MHz (7 samples)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | ..............................
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | . Timing measurements:
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | . get job = 0 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,250 | INFO     | . initial setup = 2 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | . payload setup = 5 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | . stage-in = 0 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | . payload execution = 6714 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | . stage-out = 1 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | . log creation = 0 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,251 | INFO     | ..............................
[2025-10-24 00:19:16] 2025-10-24 04:18:29,359 | INFO     | 
[2025-10-24 00:19:16] 2025-10-24 04:18:29,359 | INFO     | job summary report
[2025-10-24 00:19:16] 2025-10-24 04:18:29,359 | INFO     | --------------------------------------------------
[2025-10-24 00:19:16] 2025-10-24 04:18:29,359 | INFO     | PanDA job id: 6855074801
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | task id: 46771637
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | errors: (none)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | pilot state: finished 
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | transexitcode: 0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | exeerrorcode: 0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | exeerrordiag: 
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | exitcode: 0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | exitmsg: OK
[2025-10-24 00:19:16] 2025-10-24 04:18:29,360 | INFO     | cpuconsumptiontime: 49905 s
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | nevents: 400
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | neventsw: 0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | pid: 2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | pgrp: 2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | corecount: 8
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | event service: False
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | sizes: {0: 2348935, 4: 2349197, 11: 2349225, 6724: 2376423, 6726: 2385421, 6729: 2385477, 6734: 2385799}
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | --------------------------------------------------
[2025-10-24 00:19:16] 2025-10-24 04:18:29,361 | INFO     | 
[2025-10-24 00:19:16] 2025-10-24 04:18:29,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-24 00:19:16] 2025-10-24 04:18:29,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 00:19:16] 2025-10-24 04:18:29,380 | INFO     | job 6855074801 has completed (purged errors)
[2025-10-24 00:19:16] 2025-10-24 04:18:29,381 | INFO     | overall cleanup function is called
[2025-10-24 00:19:16] 2025-10-24 04:18:30,385 | INFO     | --- collectZombieJob: --- 10, [2915892]
[2025-10-24 00:19:16] 2025-10-24 04:18:30,386 | INFO     | zombie collector waiting for pid 2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:30,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 00:19:16] 2025-10-24 04:18:30,386 | INFO     | collected zombie processes
[2025-10-24 00:19:16] 2025-10-24 04:18:30,386 | INFO     | will attempt to kill all subprocesses of pid=2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:30,611 | INFO     | process IDs to be killed: [2915892] (in reverse order)
[2025-10-24 00:19:16] 2025-10-24 04:18:30,675 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 00:19:16] 2025-10-24 04:18:30,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 00:19:16] 2025-10-24 04:18:30,682 | INFO     | did not find any defunct processes belonging to 2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:30,688 | INFO     | did not find any defunct processes belonging to 2915892
[2025-10-24 00:19:16] 2025-10-24 04:18:30,688 | INFO     | ready for new job
[2025-10-24 00:19:16] 2025-10-24 04:18:30,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 00:19:16] 2025-10-24 04:18:30,690 | INFO     | ***************************************
[2025-10-24 00:19:16] 2025-10-24 04:18:30,690 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 00:19:16] 2025-10-24 04:18:30,690 | INFO     | ***************************************
[2025-10-24 00:19:16] 2025-10-24 04:18:30,690 | INFO     | 
[2025-10-24 00:19:16] 2025-10-24 04:18:30,692 | INFO     | architecture information:
[2025-10-24 00:19:16] 2025-10-24 04:18:30,693 | INFO     | executing command: cat /etc/os-release
[2025-10-24 00:19:16] 2025-10-24 04:18:30,706 | INFO     | cat /etc/os-release:
[2025-10-24 00:19:16] NAME="CentOS Linux"
[2025-10-24 00:19:16] VERSION="7 (Core)"
[2025-10-24 00:19:16] ID="centos"
[2025-10-24 00:19:16] ID_LIKE="rhel fedora"
[2025-10-24 00:19:16] VERSION_ID="7"
[2025-10-24 00:19:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 00:19:16] ANSI_COLOR="0;31"
[2025-10-24 00:19:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 00:19:16] HOME_URL="https://www.centos.org/"
[2025-10-24 00:19:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 00:19:16] 
[2025-10-24 00:19:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 00:19:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 00:19:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 00:19:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 00:19:16] 
[2025-10-24 00:19:16] 2025-10-24 04:18:30,706 | INFO     | ***************************************
[2025-10-24 00:19:16] 2025-10-24 04:18:31,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-24 00:19:16] 2025-10-24 04:18:31,224 | INFO     | sufficient remaining disk space (51434749952 B)
[2025-10-24 00:19:16] 2025-10-24 04:18:31,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 00:19:16] 2025-10-24 04:18:31,225 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 00:19:16] 2025-10-24 04:18:31,225 | INFO     | update_server=False
[2025-10-24 00:19:16] 2025-10-24 04:18:31,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 00:19:16] 2025-10-24 04:18:31,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 00:19:16] 2025-10-24 04:18:31,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 00:19:16] 2025-10-24 04:18:31,383 | INFO     | all payload control threads have been joined
[2025-10-24 00:19:16] 2025-10-24 04:18:31,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 00:19:16] 2025-10-24 04:18:31,465 | INFO     | aborting loop
[2025-10-24 00:19:16] 2025-10-24 04:18:31,641 | INFO     | all data control threads have been joined
[2025-10-24 00:19:16] 2025-10-24 04:18:31,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 00:19:16] 2025-10-24 04:18:32,226 | INFO     | [job] retrieve thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,231 | INFO     | [job] queue monitor thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,388 | INFO     | [payload] control thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,399 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,470 | INFO     | [job] job monitor thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,541 | INFO     | [payload] failed_post thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,639 | INFO     | [data] copytool_in thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,646 | INFO     | [data] control thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:32,664 | INFO     | all job control threads have been joined
[2025-10-24 00:19:16] 2025-10-24 04:18:32,733 | INFO     | [job] validate thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:33,073 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:33,129 | INFO     | [payload] validate_post thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:33,445 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:33,669 | INFO     | [job] control thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:33,777 | INFO     | [data] copytool_out thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:35,227 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:18:41,490 | INFO     | job.realtimelogging is not enabled
[2025-10-24 00:19:16] 2025-10-24 04:18:42,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 00:19:16] 2025-10-24 04:19:00,928 | INFO     | PID=2909025 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 00:19:16] 2025-10-24 04:19:00,928 | INFO     | .. there are 5 such processes running
[2025-10-24 00:19:16] 2025-10-24 04:19:00,928 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 00:19:16] 2025-10-24 04:19:00,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 00:19:16] 2025-10-24 04:19:00,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 00:19:16] 2025-10-24 04:19:11,229 | INFO     | [monitor] cgroup control has ended
[2025-10-24 00:19:16] 2025-10-24 04:19:11,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983761827648)>', '<ExcThread(monitor, started 139983411193600)>']
[2025-10-24 00:19:16] 2025-10-24 04:19:11,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 00:19:16] 2025-10-24 04:19:11,980 | INFO     | [monitor] control thread has ended
[2025-10-24 00:19:16] 2025-10-24 04:19:16,703 | INFO     | all workflow threads have been joined
[2025-10-24 00:19:16] 2025-10-24 04:19:16,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 00:19:16] 2025-10-24 04:19:16,704 | INFO     | traces error code: 0
[2025-10-24 00:19:16] 2025-10-24 04:19:16,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 00:19:16] 2025-10-24 04:19:16,822 [wrapper] ==== pilot stdout END ====
[2025-10-24 00:19:16] 2025-10-24 04:19:16,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 00:19:16] 2025-10-24 04:19:16,827 [wrapper] pilotpid: 2909025
[2025-10-24 00:19:16] 2025-10-24 04:19:16,830 [wrapper] Pilot exit status: 0
[2025-10-24 00:19:16] 2025-10-24 04:19:16,839 [wrapper] pandaids: 6855074801
[2025-10-24 00:19:16] 2025-10-24 04:19:16,882 [wrapper] cleanup supervisor_pilot 3122346 2909026
[2025-10-24 00:19:16] 2025-10-24 04:19:16,884 [wrapper] Test setup, not cleaning
[2025-10-24 00:19:16] 2025-10-24 04:19:16,887 [wrapper] apfmon messages muted
[2025-10-24 00:19:16] 2025-10-24 04:19:16,889 [wrapper] ==== wrapper stdout END ====
[2025-10-24 00:19:16] 2025-10-24 04:19:16,892 [wrapper] ==== wrapper stderr END ====
[2025-10-24 00:19:16]  *** Error codes and diagnostics ***
[2025-10-24 00:19:16]     "exeErrorCode": 0,
[2025-10-24 00:19:16]     "exeErrorDiag": "",
[2025-10-24 00:19:16]     "pilotErrorCode": 0,
[2025-10-24 00:19:16]     "pilotErrorDiag": "",
[2025-10-24 00:19:16]  *** Listing of results directory ***
[2025-10-24 00:19:16] total 429288
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 16:24 pilot3.tar.gz
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 17:06 queuedata.json
[2025-10-24 00:19:16] -rwx------. 1 boincer umatlas     36292 Oct 23 17:08 runpilot2-wrapper.sh
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas       100 Oct 23 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 00:19:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 22:25 run_atlas
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas       105 Oct 23 22:25 job.xml
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas 227963417 Oct 23 22:25 EVNT.46771634._004467.pool.root.1
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 22:25 start_atlas.sh
[2025-10-24 00:19:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 22:25 shared
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas    569684 Oct 23 22:25 input.tar.gz
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas         0 Oct 23 22:25 boinc_lockfile
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas      2562 Oct 23 22:25 pandaJob.out
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas    978558 Oct 23 22:25 agis_schedconf.cvmfs.json
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas   1560740 Oct 23 22:25 agis_ddmendpoints.agis.ALL.json
[2025-10-24 00:19:16] drwx------. 5 boincer umatlas      4096 Oct 23 22:26 pilot3
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas      6659 Oct 24 00:13 init_data.xml
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas 205061005 Oct 24 00:17 HITS.46771637._111898.pool.root.1
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas       529 Oct 24 00:17 boinc_task_state.xml
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas        95 Oct 24 00:18 pilot_heartbeat.json
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas      1035 Oct 24 00:18 memory_monitor_summary.json
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas    355408 Oct 24 00:18 log.46771637._111898.job.log.tgz.1
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas      7819 Oct 24 00:18 heartbeat.json
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 00:19 boinc_mmap_file
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas        27 Oct 24 00:19 wrapper_checkpoint.txt
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas      4895 Oct 24 00:19 pilotlog.txt
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas    976206 Oct 24 00:19 log.46771637._111898.job.log.1
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas       357 Oct 24 00:19 output.list
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas       620 Oct 24 00:19 runtime_log
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas   1351680 Oct 24 00:19 result.tar.gz
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas      8703 Oct 24 00:19 runtime_log.err
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas       653 Oct 24 00:19 MFUMDmJjHW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEl9NDmtQbjem.diag
[2025-10-24 00:19:16] -rw-r--r--. 1 boincer umatlas     20868 Oct 24 00:19 stderr.txt
[2025-10-24 00:19:16] HITS file was successfully produced:
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas 205061005 Oct 24 00:17 shared/HITS.pool.root.1
[2025-10-24 00:19:16]  *** Contents of shared directory: ***
[2025-10-24 00:19:16] total 424780
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas 227963417 Oct 23 22:25 ATLAS.root_0
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 22:25 start_atlas.sh
[2025-10-24 00:19:16] -rw-r--r--. 2 boincer umatlas    569684 Oct 23 22:25 input.tar.gz
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas 205061005 Oct 24 00:17 HITS.pool.root.1
[2025-10-24 00:19:16] -rw-------. 1 boincer umatlas   1351680 Oct 24 00:19 result.tar.gz
00:19:18 (2905363): run_atlas exited; CPU time 50020.550450
00:19:18 (2905363): called boinc_finish(0)

</stderr_txt>
]]>

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