Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:31:02 (3086186): wrapper (7.7.26015): starting
16:31:02 (3086186): wrapper: running run_atlas (--nthreads 3)
[2025-10-24 16:31:02] Arguments: --nthreads 3
[2025-10-24 16:31:02] Threads: 3
[2025-10-24 16:31:02] Checking for CVMFS
[2025-10-24 16:31:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 16:31:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 16:31:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 16:31:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 16:31:03] 2.9.2.0 1615638 5051 84340 152083 3 56 24496886 36864000 0 130560 0 3856585 99.989 195133 911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-24 16:31:03] CVMFS is ok
[2025-10-24 16:31:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 16:31:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 16:31:03] Further information can be found at the LHC@home message board.
[2025-10-24 16:31:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 16:31:03] Checking for apptainer binary...
[2025-10-24 16:31:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 16:31:03] Running /usr/bin/apptainer --version
[2025-10-24 16:31:03] apptainer version 1.3.6-4.2
[2025-10-24 16:31:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 16:31:03] thA325b
[2025-10-24 16:31:03] apptainer works
[2025-10-24 16:31:03] Set ATHENA_PROC_NUMBER=3
[2025-10-24 16:31:03] Set ATHENA_CORE_NUMBER=3
[2025-10-24 16:31:03] Starting ATLAS job with PandaID=6855074618
[2025-10-24 16:31:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 18:02:21]  *** The last 200 lines of the pilot log: ***
[2025-10-24 18:02:21]  replicas=None
[2025-10-24 18:02:21]  scope=mc23_13p6TeV
[2025-10-24 18:02:21]  status=None
[2025-10-24 18:02:21]  status_code=0
[2025-10-24 18:02:21]  storage_token=
[2025-10-24 18:02:21]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6855074618/log.46771637._111730.job.log.tgz.1
[2025-10-24 18:02:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/21/log.46771637._111730.job.log.tgz.1
[2025-10-24 18:02:21]  workdir=None
[2025-10-24 18:02:21] ]
[2025-10-24 18:02:21] 2025-10-24 16:01:26,605 | INFO     | transferring file log.46771637._111730.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6855074618/log.46771637._111730.job.log.tgz.1 to /local/data/boinc/
[2025-10-24 18:02:21] 2025-10-24 16:01:26,605 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6855074618/log.46771637._111730.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._1117
[2025-10-24 18:02:21] 2025-10-24 16:01:26,617 | INFO     | adding to output.list: log.46771637._111730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/21/log.46771637._111730.job.log.tg
[2025-10-24 18:02:21] 2025-10-24 16:01:26,617 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 18:02:21] 2025-10-24 16:01:26,617 | INFO     | summary of transferred files:
[2025-10-24 18:02:21] 2025-10-24 16:01:26,617 | INFO     |  -- lfn=log.46771637._111730.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 18:02:21] 2025-10-24 16:01:26,617 | INFO     | stage-out finished correctly
[2025-10-24 18:02:21] 2025-10-24 16:01:27,387 | INFO     | time since job start (5419s) is within the limit (172800.0s)
[2025-10-24 18:02:21] 2025-10-24 16:01:27,577 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 18:02:21] 2025-10-24 16:01:27,934 | INFO     | monitor loop #416: job 0:6855074618 is in state 'finished'
[2025-10-24 18:02:21] 2025-10-24 16:01:27,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:02:21] 2025-10-24 16:01:29,394 | INFO     | time since job start (5421s) is within the limit (172800.0s)
[2025-10-24 18:02:21] 2025-10-24 16:01:29,831 | INFO     | job 6855074618 has state=finished
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | preparing for final server update for job 6855074618 in state='finished'
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | this job has now completed (state=finished)
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | log transfer has been attempted: DONE
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | job 6855074618 has finished - writing final server update
[2025-10-24 18:02:21] 2025-10-24 16:01:29,832 | INFO     | total number of processed events: 400 (read)
[2025-10-24 18:02:21] 2025-10-24 16:01:29,833 | INFO     | executing command: lscpu
[2025-10-24 18:02:21] 2025-10-24 16:01:29,847 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 18:02:21] 2025-10-24 16:01:30,438 | INFO     | monitor loop #417: job 0:6855074618 is in state 'finished'
[2025-10-24 18:02:21] 2025-10-24 16:01:30,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:02:21] 2025-10-24 16:01:31,400 | INFO     | time since job start (5423s) is within the limit (172800.0s)
[2025-10-24 18:02:21] 2025-10-24 16:01:32,941 | INFO     | monitor loop #418: job 0:6855074618 is in state 'finished'
[2025-10-24 18:02:21] 2025-10-24 16:01:32,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 18:02:21] 2025-10-24 16:01:33,406 | INFO     | time since job start (5425s) is within the limit (172800.0s)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,267 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 18:02:21] 2025-10-24 16:01:34,268 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3795.907333333333
[2025-10-24 18:02:21] 2025-10-24 16:01:34,269 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6855074618/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,270 | INFO     | extracted standard info from prmon json
[2025-10-24 18:02:21] 2025-10-24 16:01:34,270 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 18:02:21] 2025-10-24 16:01:34,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 18:02:21] 2025-10-24 16:01:34,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 18:02:21] 2025-10-24 16:01:34,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | fitting pss+swap vs Time
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | sum of square deviations: 170944600.5
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | sum of deviations: -5755688549.999999
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | mean x: 1761319062.5
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | mean y: 2416112.7317073173
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | -- intersect: 59305862558.40041
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | intersect: 59305862558.40041
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | chi2: 0.01948941418910635
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | -- intersect: 59305862558.40041
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | current memory leak: -33.67 B/s (using 82 data points, chi2=0.02)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | could have reported an average CPU frequency of 3806 MHz (6 samples)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | ..............................
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . Timing measurements:
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . get job = 0 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . initial setup = 1 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . payload setup = 2 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . stage-in = 0 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . payload execution = 5398 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . stage-out = 0 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | . log creation = 0 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,271 | INFO     | ..............................
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | 
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | job summary report
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | --------------------------------------------------
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | PanDA job id: 6855074618
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | task id: 46771637
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | errors: (none)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | pilot state: finished 
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | transexitcode: 0
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | exeerrorcode: 0
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | exeerrordiag: 
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | exitcode: 0
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | exitmsg: OK
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | cpuconsumptiontime: 15594 s
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | nevents: 400
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | neventsw: 0
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | pid: 3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | pgrp: 3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | corecount: 3
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | event service: False
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | sizes: {0: 2348938, 2: 2349200, 11: 2349228, 5405: 2384939, 5406: 2384939, 5413: 2385133}
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | --------------------------------------------------
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | 
[2025-10-24 18:02:21] 2025-10-24 16:01:34,495 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | job 6855074618 has completed (purged errors)
[2025-10-24 18:02:21] 2025-10-24 16:01:34,510 | INFO     | overall cleanup function is called
[2025-10-24 18:02:21] 2025-10-24 16:01:35,516 | INFO     | --- collectZombieJob: --- 10, [3096338]
[2025-10-24 18:02:21] 2025-10-24 16:01:35,517 | INFO     | zombie collector waiting for pid 3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:35,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 18:02:21] 2025-10-24 16:01:35,517 | INFO     | collected zombie processes
[2025-10-24 18:02:21] 2025-10-24 16:01:35,517 | INFO     | will attempt to kill all subprocesses of pid=3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:35,555 | INFO     | process IDs to be killed: [3096338] (in reverse order)
[2025-10-24 18:02:21] 2025-10-24 16:01:35,578 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 18:02:21] 2025-10-24 16:01:35,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 18:02:21] 2025-10-24 16:01:35,580 | INFO     | did not find any defunct processes belonging to 3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | did not find any defunct processes belonging to 3096338
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | ready for new job
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | ***************************************
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | ***************************************
[2025-10-24 18:02:21] 2025-10-24 16:01:35,581 | INFO     | 
[2025-10-24 18:02:21] 2025-10-24 16:01:35,582 | INFO     | architecture information:
[2025-10-24 18:02:21] 2025-10-24 16:01:35,582 | INFO     | executing command: cat /etc/os-release
[2025-10-24 18:02:21] 2025-10-24 16:01:35,590 | INFO     | cat /etc/os-release:
[2025-10-24 18:02:21] NAME="CentOS Linux"
[2025-10-24 18:02:21] VERSION="7 (Core)"
[2025-10-24 18:02:21] ID="centos"
[2025-10-24 18:02:21] ID_LIKE="rhel fedora"
[2025-10-24 18:02:21] VERSION_ID="7"
[2025-10-24 18:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 18:02:21] ANSI_COLOR="0;31"
[2025-10-24 18:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 18:02:21] HOME_URL="https://www.centos.org/"
[2025-10-24 18:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 18:02:21] 
[2025-10-24 18:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 18:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 18:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 18:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 18:02:21] 
[2025-10-24 18:02:21] 2025-10-24 16:01:35,591 | INFO     | ***************************************
[2025-10-24 18:02:21] 2025-10-24 16:01:36,094 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-24 18:02:21] 2025-10-24 16:01:36,105 | INFO     | sufficient remaining disk space (234718494720 B)
[2025-10-24 18:02:21] 2025-10-24 16:01:36,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 18:02:21] 2025-10-24 16:01:36,105 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 18:02:21] 2025-10-24 16:01:36,105 | INFO     | update_server=False
[2025-10-24 18:02:21] 2025-10-24 16:01:36,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 18:02:21] 2025-10-24 16:01:36,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 18:02:21] 2025-10-24 16:01:36,108 | INFO     | all data control threads have been joined
[2025-10-24 18:02:21] 2025-10-24 16:01:36,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 18:02:21] 2025-10-24 16:01:36,449 | INFO     | aborting loop
[2025-10-24 18:02:21] 2025-10-24 16:01:37,111 | INFO     | [data] control thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,111 | INFO     | [job] retrieve thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,111 | INFO     | [job] queue monitor thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 18:02:21] 2025-10-24 16:01:37,164 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,176 | INFO     | [payload] failed_post thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,379 | INFO     | all job control threads have been joined
[2025-10-24 18:02:21] 2025-10-24 16:01:37,455 | INFO     | [job] job monitor thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,556 | INFO     | all payload control threads have been joined
[2025-10-24 18:02:21] 2025-10-24 16:01:37,825 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:37,860 | INFO     | [data] copytool_in thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 18:02:21] 2025-10-24 16:01:38,385 | INFO     | [job] control thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,482 | INFO     | [job] validate thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,556 | INFO     | [payload] validate_post thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,562 | INFO     | [payload] control thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:38,573 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:39,169 | INFO     | [data] copytool_out thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:01:42,123 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 18:02:21] 2025-10-24 16:02:05,459 | INFO     | 5427s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-24 18:02:21] 2025-10-24 16:02:06,515 | INFO     | PID=3089905 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 18:02:21] 2025-10-24 16:02:06,515 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 18:02:21] 2025-10-24 16:02:06,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 18:02:21] 2025-10-24 16:02:06,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 18:02:21] 2025-10-24 16:02:14,939 | INFO     | [monitor] cgroup control has ended
[2025-10-24 18:02:21] 2025-10-24 16:02:16,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473614100288)>', '<ExcThread(monitor, started 140473112966912)>']
[2025-10-24 18:02:21] 2025-10-24 16:02:17,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 18:02:21] 2025-10-24 16:02:17,574 | INFO     | [monitor] control thread has ended
[2025-10-24 18:02:21] 2025-10-24 16:02:21,663 | INFO     | all workflow threads have been joined
[2025-10-24 18:02:21] 2025-10-24 16:02:21,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 18:02:21] 2025-10-24 16:02:21,663 | INFO     | traces error code: 0
[2025-10-24 18:02:21] 2025-10-24 16:02:21,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 18:02:21] 2025-10-24 16:02:21,712 [wrapper] ==== pilot stdout END ====
[2025-10-24 18:02:21] 2025-10-24 16:02:21,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 18:02:21] 2025-10-24 16:02:21,717 [wrapper] pilotpid: 3089905
[2025-10-24 18:02:21] 2025-10-24 16:02:21,719 [wrapper] Pilot exit status: 0
[2025-10-24 18:02:21] 2025-10-24 16:02:21,726 [wrapper] pandaids: 6855074618
[2025-10-24 18:02:21] 2025-10-24 16:02:21,742 [wrapper] cleanup supervisor_pilot 3108546 3089906
[2025-10-24 18:02:21] 2025-10-24 16:02:21,744 [wrapper] Test setup, not cleaning
[2025-10-24 18:02:21] 2025-10-24 16:02:21,746 [wrapper] apfmon messages muted
[2025-10-24 18:02:21] 2025-10-24 16:02:21,748 [wrapper] ==== wrapper stdout END ====
[2025-10-24 18:02:21] 2025-10-24 16:02:21,751 [wrapper] ==== wrapper stderr END ====
[2025-10-24 18:02:21]  *** Error codes and diagnostics ***
[2025-10-24 18:02:21]     "exeErrorCode": 0,
[2025-10-24 18:02:21]     "exeErrorDiag": "",
[2025-10-24 18:02:21]     "pilotErrorCode": 0,
[2025-10-24 18:02:21]     "pilotErrorDiag": "",
[2025-10-24 18:02:21]  *** Listing of results directory ***
[2025-10-24 18:02:21] total 435244
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc    557409 Oct 23 22:24 pilot3.tar.gz
[2025-10-24 18:02:21] -rwx------ 1 boinc boinc     36292 Oct 23 22:42 runpilot2-wrapper.sh
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc      5112 Oct 23 22:42 queuedata.json
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc       100 Oct 24 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 18:02:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 16:31 run_atlas
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc       105 Oct 24 16:31 job.xml
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc 230336938 Oct 24 16:31 EVNT.46771634._004459.pool.root.1
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc      6919 Oct 24 16:31 init_data.xml
[2025-10-24 18:02:21] drwxrwx--x 2 boinc boinc      4096 Oct 24 16:31 shared
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc    569688 Oct 24 16:31 input.tar.gz
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc     15120 Oct 24 16:31 start_atlas.sh
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc         0 Oct 24 16:31 boinc_lockfile
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc      2562 Oct 24 16:31 pandaJob.out
[2025-10-24 18:02:21] -rw------- 1 boinc boinc    978596 Oct 24 16:31 agis_schedconf.cvmfs.json
[2025-10-24 18:02:21] -rw------- 1 boinc boinc   1560772 Oct 24 16:31 agis_ddmendpoints.agis.ALL.json
[2025-10-24 18:02:21] drwx------ 5 boinc boinc      4096 Oct 24 16:31 pilot3
[2025-10-24 18:02:21] -rw------- 1 boinc boinc 209330426 Oct 24 18:01 HITS.46771637._111730.pool.root.1
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc       529 Oct 24 18:01 boinc_task_state.xml
[2025-10-24 18:02:21] -rw------- 1 boinc boinc      1021 Oct 24 18:01 memory_monitor_summary.json
[2025-10-24 18:02:21] -rw------- 1 boinc boinc    264662 Oct 24 18:01 log.46771637._111730.job.log.tgz.1
[2025-10-24 18:02:21] -rw------- 1 boinc boinc      7765 Oct 24 18:01 heartbeat.json
[2025-10-24 18:02:21] -rw------- 1 boinc boinc        95 Oct 24 18:01 pilot_heartbeat.json
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc      8192 Oct 24 18:02 boinc_mmap_file
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc        27 Oct 24 18:02 wrapper_checkpoint.txt
[2025-10-24 18:02:21] -rw------- 1 boinc boinc      4867 Oct 24 18:02 pilotlog.txt
[2025-10-24 18:02:21] -rw------- 1 boinc boinc    790940 Oct 24 18:02 log.46771637._111730.job.log.1
[2025-10-24 18:02:21] -rw------- 1 boinc boinc       357 Oct 24 18:02 output.list
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc       620 Oct 24 18:02 runtime_log
[2025-10-24 18:02:21] -rw------- 1 boinc boinc   1075200 Oct 24 18:02 result.tar.gz
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc      8782 Oct 24 18:02 runtime_log.err
[2025-10-24 18:02:21] -rw------- 1 boinc boinc       660 Oct 24 18:02 X4eKDmTJHW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmK7jMDm9A7w7n.diag
[2025-10-24 18:02:21] -rw-r--r-- 1 boinc boinc     21856 Oct 24 18:02 stderr.txt
[2025-10-24 18:02:21] HITS file was successfully produced:
[2025-10-24 18:02:21] -rw------- 1 boinc boinc 209330426 Oct 24 18:01 shared/HITS.pool.root.1
[2025-10-24 18:02:21]  *** Contents of shared directory: ***
[2025-10-24 18:02:21] total 431004
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc 230336938 Oct 24 16:31 ATLAS.root_0
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc    569688 Oct 24 16:31 input.tar.gz
[2025-10-24 18:02:21] -rw-r--r-- 2 boinc boinc     15120 Oct 24 16:31 start_atlas.sh
[2025-10-24 18:02:21] -rw------- 1 boinc boinc 209330426 Oct 24 18:01 HITS.pool.root.1
[2025-10-24 18:02:21] -rw------- 1 boinc boinc   1075200 Oct 24 18:02 result.tar.gz
18:02:23 (3086186): run_atlas exited; CPU time 15613.648522
18:02:23 (3086186): called boinc_finish(0)

</stderr_txt>
]]>

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