Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:03:11 (2722001): wrapper (7.7.26015): starting
21:03:11 (2722001): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 21:03:11] Arguments: --nthreads 8
[2025-10-23 21:03:11] Threads: 8
[2025-10-23 21:03:11] Checking for CVMFS
[2025-10-23 21:03:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 21:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 21:03:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 21:03:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 21:03:11] 2.13.2.0 129819 3233 70420 152055 3 188 5264793 39288833 3664 16776704 0 10272932 99.933 767071 17131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 21:03:11] CVMFS is ok
[2025-10-23 21:03:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 21:03:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 21:03:11] Further information can be found at the LHC@home message board.
[2025-10-23 21:03:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 21:03:11] Checking for apptainer binary...
[2025-10-23 21:03:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 21:03:11] Running /usr/bin/apptainer --version
[2025-10-23 21:03:11] apptainer version 1.4.3-1.el9
[2025-10-23 21:03:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 21:03:12] c-210-16.aglt2.org
[2025-10-23 21:03:12] apptainer works
[2025-10-23 21:03:12] Set ATHENA_PROC_NUMBER=8
[2025-10-23 21:03:12] Set ATHENA_CORE_NUMBER=8
[2025-10-23 21:03:12] Starting ATLAS job with PandaID=6855199418
[2025-10-23 21:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 22:50:38]  *** The last 200 lines of the pilot log: ***
[2025-10-23 22:50:38] 2025-10-24 02:49:50,355 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 22:50:38] 2025-10-24 02:49:50,355 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 22:50:38] 2025-10-24 02:49:50,356 | INFO     | fitting pss+swap vs Time
[2025-10-23 22:50:38] 2025-10-24 02:49:50,356 | INFO     | sum of square deviations: 358927660.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | sum of deviations: 8183803371.000003
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | mean x: 1761270999.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | mean y: 2454689.0095238094
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | -- intersect: -40155764209.08472
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | intersect: -40155764209.08472
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | chi2: 1.9997318078863788
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | sum of square deviations: 310052325.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,357 | INFO     | sum of deviations: 14399908331.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | mean x: 1761270846.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | mean y: 2473246.7
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | -- intersect: -81797070542.11943
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | intersect: -81797070542.11943
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | chi2: 1.2252030467315835
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | current chi2=1.2252030467315835 (change=38.73163181684024 %)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | sum of square deviations: 265828240.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | sum of deviations: 13535767691.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,358 | INFO     | mean x: 1761270694.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | mean y: 2470265.0210526315
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | -- intersect: -89680066680.45302
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | intersect: -89680066680.45302
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | chi2: 1.2268268152036903
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | current chi2=1.2268268152036903 (change=-0.13253056107217645 %)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | right removable region: 94
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | sum of square deviations: 310052325.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | sum of deviations: -4963908824.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,359 | INFO     | mean x: 1761271151.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | mean y: 2494732.39
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | -- intersect: 28200281706.79223
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | intersect: 28200281706.79223
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | chi2: 0.8240441933623278
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | current chi2=0.8240441933623278 (change=58.79226453704794 %)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | sum of square deviations: 265828240.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | sum of deviations: -4796762389.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | mean x: 1761271304.0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | mean y: 2493982.1157894735
[2025-10-23 22:50:38] 2025-10-24 02:49:50,360 | INFO     | -- intersect: 31783917761.06488
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | intersect: 31783917761.06488
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | chi2: 0.8095495015596924
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | current chi2=0.8095495015596924 (change=1.7589702007962777 %)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | left removable region: 20
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | sum of square deviations: 125630262.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | sum of deviations: 606980103.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | mean x: 1761271273.5
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | mean y: 2519102.8243243243
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | -- intersect: -8507027869.431718
[2025-10-23 22:50:38] 2025-10-24 02:49:50,361 | INFO     | intersect: -8507027869.431718
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | chi2: 0.00019972359553713318
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | -- intersect: -8507027869.431718
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | current memory leak: 4.83 B/s (using 74 data points, chi2=0.00)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | ..............................
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . Timing measurements:
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . get job = 0 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . initial setup = 2 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . payload setup = 5 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . stage-in = 0 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . payload execution = 6355 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . stage-out = 0 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | . log creation = 0 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,362 | INFO     | ..............................
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | 
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | job summary report
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | --------------------------------------------------
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | PanDA job id: 6855199418
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | task id: 46771637
[2025-10-23 22:50:38] 2025-10-24 02:49:50,417 | INFO     | errors: (none)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | pilot state: finished 
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | transexitcode: 0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | exeerrorcode: 0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | exeerrordiag: 
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | exitcode: 0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | exitmsg: OK
[2025-10-23 22:50:38] 2025-10-24 02:49:50,418 | INFO     | cpuconsumptiontime: 47080 s
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | nevents: 400
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | neventsw: 0
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | pid: 2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | pgrp: 2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | corecount: 8
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | event service: False
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | sizes: {0: 2348107, 1: 2348963, 5: 2349225, 12: 2349281, 6364: 2376395, 6367: 2385393, 6369: 2385577, 6373: 2385771}
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | --------------------------------------------------
[2025-10-23 22:50:38] 2025-10-24 02:49:50,419 | INFO     | 
[2025-10-23 22:50:38] 2025-10-24 02:49:50,420 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-23 22:50:38] 2025-10-24 02:49:50,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,441 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 22:50:38] 2025-10-24 02:49:50,441 | INFO     | job 6855199418 has completed (purged errors)
[2025-10-23 22:50:38] 2025-10-24 02:49:50,441 | INFO     | overall cleanup function is called
[2025-10-23 22:50:38] 2025-10-24 02:49:51,449 | INFO     | --- collectZombieJob: --- 10, [2732068]
[2025-10-23 22:50:38] 2025-10-24 02:49:51,450 | INFO     | zombie collector waiting for pid 2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:51,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 22:50:38] 2025-10-24 02:49:51,450 | INFO     | collected zombie processes
[2025-10-23 22:50:38] 2025-10-24 02:49:51,450 | INFO     | will attempt to kill all subprocesses of pid=2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:51,663 | INFO     | process IDs to be killed: [2732068] (in reverse order)
[2025-10-23 22:50:38] 2025-10-24 02:49:51,724 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 22:50:38] 2025-10-24 02:49:51,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 22:50:38] 2025-10-24 02:49:51,730 | INFO     | did not find any defunct processes belonging to 2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:51,736 | INFO     | did not find any defunct processes belonging to 2732068
[2025-10-23 22:50:38] 2025-10-24 02:49:51,736 | INFO     | ready for new job
[2025-10-23 22:50:38] 2025-10-24 02:49:51,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 22:50:38] 2025-10-24 02:49:51,738 | INFO     | ***************************************
[2025-10-23 22:50:38] 2025-10-24 02:49:51,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 22:50:38] 2025-10-24 02:49:51,738 | INFO     | ***************************************
[2025-10-23 22:50:38] 2025-10-24 02:49:51,738 | INFO     | 
[2025-10-23 22:50:38] 2025-10-24 02:49:51,740 | INFO     | architecture information:
[2025-10-23 22:50:38] 2025-10-24 02:49:51,741 | INFO     | executing command: cat /etc/os-release
[2025-10-23 22:50:38] 2025-10-24 02:49:51,753 | INFO     | cat /etc/os-release:
[2025-10-23 22:50:38] NAME="CentOS Linux"
[2025-10-23 22:50:38] VERSION="7 (Core)"
[2025-10-23 22:50:38] ID="centos"
[2025-10-23 22:50:38] ID_LIKE="rhel fedora"
[2025-10-23 22:50:38] VERSION_ID="7"
[2025-10-23 22:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 22:50:38] ANSI_COLOR="0;31"
[2025-10-23 22:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 22:50:38] HOME_URL="https://www.centos.org/"
[2025-10-23 22:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 22:50:38] 
[2025-10-23 22:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 22:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 22:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 22:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 22:50:38] 
[2025-10-23 22:50:38] 2025-10-24 02:49:51,753 | INFO     | ***************************************
[2025-10-23 22:50:38] 2025-10-24 02:49:52,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-23 22:50:38] 2025-10-24 02:49:52,270 | INFO     | sufficient remaining disk space (51489275904 B)
[2025-10-23 22:50:38] 2025-10-24 02:49:52,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 22:50:38] 2025-10-24 02:49:52,271 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 22:50:38] 2025-10-24 02:49:52,271 | INFO     | update_server=False
[2025-10-23 22:50:38] 2025-10-24 02:49:52,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 22:50:38] 2025-10-24 02:49:52,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 22:50:38] 2025-10-24 02:49:52,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 22:50:38] 2025-10-24 02:49:52,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 22:50:38] 2025-10-24 02:49:52,272 | INFO     | aborting loop
[2025-10-23 22:50:38] 2025-10-24 02:49:52,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 22:50:38] 2025-10-24 02:49:52,458 | INFO     | all payload control threads have been joined
[2025-10-23 22:50:38] 2025-10-24 02:49:52,559 | INFO     | all job control threads have been joined
[2025-10-23 22:50:38] 2025-10-24 02:49:52,905 | INFO     | all data control threads have been joined
[2025-10-23 22:50:38] 2025-10-24 02:49:53,274 | INFO     | [job] job monitor thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,274 | INFO     | [job] retrieve thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,276 | INFO     | [job] queue monitor thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,464 | INFO     | [payload] control thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,562 | INFO     | [job] control thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,631 | INFO     | [data] copytool_in thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,752 | INFO     | [job] validate thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,911 | INFO     | [data] control thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:53,965 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:54,031 | INFO     | [payload] validate_post thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:54,277 | INFO     | [data] copytool_out thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:54,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:54,512 | INFO     | [payload] failed_post thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:54,697 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:49:56,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:50:02,322 | INFO     | job.realtimelogging is not enabled
[2025-10-23 22:50:38] 2025-10-24 02:50:03,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 22:50:38] 2025-10-24 02:50:23,537 | INFO     | PID=2725745 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 22:50:38] 2025-10-24 02:50:23,537 | INFO     | .. there are 5 such processes running
[2025-10-23 22:50:38] 2025-10-24 02:50:23,538 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 22:50:38] 2025-10-24 02:50:23,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 22:50:38] 2025-10-24 02:50:23,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 22:50:38] 2025-10-24 02:50:32,260 | INFO     | [monitor] cgroup control has ended
[2025-10-23 22:50:38] 2025-10-24 02:50:33,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258954090304)>', '<ExcThread(monitor, started 140257861302016)>']
[2025-10-23 22:50:38] 2025-10-24 02:50:33,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 22:50:38] 2025-10-24 02:50:33,584 | INFO     | [monitor] control thread has ended
[2025-10-23 22:50:38] 2025-10-24 02:50:38,539 | INFO     | all workflow threads have been joined
[2025-10-23 22:50:38] 2025-10-24 02:50:38,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 22:50:38] 2025-10-24 02:50:38,540 | INFO     | traces error code: 0
[2025-10-23 22:50:38] 2025-10-24 02:50:38,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 22:50:38] 2025-10-24 02:50:38,643 [wrapper] ==== pilot stdout END ====
[2025-10-23 22:50:38] 2025-10-24 02:50:38,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 22:50:38] 2025-10-24 02:50:38,649 [wrapper] pilotpid: 2725745
[2025-10-23 22:50:38] 2025-10-24 02:50:38,651 [wrapper] Pilot exit status: 0
[2025-10-23 22:50:38] 2025-10-24 02:50:38,661 [wrapper] pandaids: 6855199418
[2025-10-23 22:50:38] 2025-10-24 02:50:38,702 [wrapper] cleanup supervisor_pilot 2948521 2725746
[2025-10-23 22:50:38] 2025-10-24 02:50:38,705 [wrapper] Test setup, not cleaning
[2025-10-23 22:50:38] 2025-10-24 02:50:38,707 [wrapper] apfmon messages muted
[2025-10-23 22:50:38] 2025-10-24 02:50:38,710 [wrapper] ==== wrapper stdout END ====
[2025-10-23 22:50:38] 2025-10-24 02:50:38,712 [wrapper] ==== wrapper stderr END ====
[2025-10-23 22:50:38]  *** Error codes and diagnostics ***
[2025-10-23 22:50:38]     "exeErrorCode": 0,
[2025-10-23 22:50:38]     "exeErrorDiag": "",
[2025-10-23 22:50:38]     "pilotErrorCode": 0,
[2025-10-23 22:50:38]     "pilotErrorDiag": "",
[2025-10-23 22:50:38]  *** Listing of results directory ***
[2025-10-23 22:50:38] total 426136
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 18:28 pilot3.tar.gz
[2025-10-23 22:50:38] -rwx------. 1 boincer umatlas     36292 Oct 23 18:46 runpilot2-wrapper.sh
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 18:46 queuedata.json
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas       100 Oct 23 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 22:50:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 21:03 run_atlas
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas       105 Oct 23 21:03 job.xml
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas 229151609 Oct 23 21:03 EVNT.46771634._004521.pool.root.1
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:03 start_atlas.sh
[2025-10-23 22:50:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 21:03 shared
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas    569689 Oct 23 21:03 input.tar.gz
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas         0 Oct 23 21:03 boinc_lockfile
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas      2562 Oct 23 21:03 pandaJob.out
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas    978566 Oct 23 21:03 agis_schedconf.cvmfs.json
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas   1560740 Oct 23 21:03 agis_ddmendpoints.agis.ALL.json
[2025-10-23 22:50:38] drwx------. 5 boincer umatlas      4096 Oct 23 21:03 pilot3
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas      6659 Oct 23 22:49 init_data.xml
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas       529 Oct 23 22:49 boinc_task_state.xml
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas 200725032 Oct 23 22:49 HITS.46771637._113246.pool.root.1
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas      1035 Oct 23 22:49 memory_monitor_summary.json
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas    357770 Oct 23 22:49 log.46771637._113246.job.log.tgz.1
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas      7814 Oct 23 22:49 heartbeat.json
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas        95 Oct 23 22:50 pilot_heartbeat.json
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 22:50 boinc_mmap_file
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas        27 Oct 23 22:50 wrapper_checkpoint.txt
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas      4895 Oct 23 22:50 pilotlog.txt
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas    929466 Oct 23 22:50 log.46771637._113246.job.log.1
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas       357 Oct 23 22:50 output.list
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas       620 Oct 23 22:50 runtime_log
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas   1310720 Oct 23 22:50 result.tar.gz
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas      8703 Oct 23 22:50 runtime_log.err
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas       652 Oct 23 22:50 LhdLDmRFJW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr59NDmbMRakn.diag
[2025-10-23 22:50:38] -rw-r--r--. 1 boincer umatlas     20854 Oct 23 22:50 stderr.txt
[2025-10-23 22:50:38] HITS file was successfully produced:
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas 200725032 Oct 23 22:49 shared/HITS.pool.root.1
[2025-10-23 22:50:38]  *** Contents of shared directory: ***
[2025-10-23 22:50:38] total 421672
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas 229151609 Oct 23 21:03 ATLAS.root_0
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:03 start_atlas.sh
[2025-10-23 22:50:38] -rw-r--r--. 2 boincer umatlas    569689 Oct 23 21:03 input.tar.gz
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas 200725032 Oct 23 22:49 HITS.pool.root.1
[2025-10-23 22:50:38] -rw-------. 1 boincer umatlas   1310720 Oct 23 22:50 result.tar.gz
22:50:40 (2722001): run_atlas exited; CPU time 47193.788175
22:50:40 (2722001): called boinc_finish(0)

</stderr_txt>
]]>

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