Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:11:35 (2749960): wrapper (7.7.26015): starting
21:11:35 (2749960): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 21:11:35] Arguments: --nthreads 8
[2025-10-23 21:11:35] Threads: 8
[2025-10-23 21:11:35] Checking for CVMFS
[2025-10-23 21:11:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 21:11:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 21:11:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 21:11:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 21:11:36] 2.13.2.0 129819 3241 69696 152055 3 188 5276427 39288833 3664 16776704 0 10332408 99.934 767072 17130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 21:11:36] CVMFS is ok
[2025-10-23 21:11:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 21:11:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 21:11:36] Further information can be found at the LHC@home message board.
[2025-10-23 21:11:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 21:11:36] Checking for apptainer binary...
[2025-10-23 21:11:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 21:11:36] Running /usr/bin/apptainer --version
[2025-10-23 21:11:36] apptainer version 1.4.3-1.el9
[2025-10-23 21:11:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 21:11:36] c-210-16.aglt2.org
[2025-10-23 21:11:36] apptainer works
[2025-10-23 21:11:36] Set ATHENA_PROC_NUMBER=8
[2025-10-23 21:11:36] Set ATHENA_CORE_NUMBER=8
[2025-10-23 21:11:36] Starting ATLAS job with PandaID=6853958081
[2025-10-23 21:11:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 23:09:05]  *** The last 200 lines of the pilot log: ***
[2025-10-23 23:09:05] 2025-10-24 03:08:19,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 23:09:05] 2025-10-24 03:08:19,975 | INFO     | fitting pss+swap vs Time
[2025-10-23 23:09:05] 2025-10-24 03:08:19,975 | INFO     | sum of square deviations: 471562330.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,976 | INFO     | sum of deviations: 8795849006.000004
[2025-10-23 23:09:05] 2025-10-24 03:08:19,976 | INFO     | mean x: 1761271808.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,976 | INFO     | mean y: 2477573.2
[2025-10-23 23:09:05] 2025-10-24 03:08:19,976 | INFO     | -- intersect: -32849766756.181927
[2025-10-23 23:09:05] 2025-10-24 03:08:19,976 | INFO     | intersect: -32849766756.181927
[2025-10-23 23:09:05] 2025-10-24 03:08:19,977 | INFO     | chi2: 2.2797801373216653
[2025-10-23 23:09:05] 2025-10-24 03:08:19,977 | INFO     | sum of square deviations: 412686807.5
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | sum of deviations: 16061412484.000004
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | mean x: 1761271655.5
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | mean y: 2495682.4
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | -- intersect: -68544668998.562225
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | intersect: -68544668998.562225
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | chi2: 1.4799170529668637
[2025-10-23 23:09:05] 2025-10-24 03:08:19,978 | INFO     | current chi2=1.4799170529668637 (change=35.085097517100834 %)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,979 | INFO     | sum of square deviations: 358927660.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,979 | INFO     | sum of deviations: 15400039931.000004
[2025-10-23 23:09:05] 2025-10-24 03:08:19,979 | INFO     | mean x: 1761271503.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | mean y: 2493805.6095238095
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | -- intersect: -75566080306.32265
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | intersect: -75566080306.32265
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | chi2: 1.481532871642285
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | current chi2=1.481532871642285 (change=-0.10918305672483902 %)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,980 | INFO     | right removable region: 104
[2025-10-23 23:09:05] 2025-10-24 03:08:19,981 | INFO     | sum of square deviations: 412686807.5
[2025-10-23 23:09:05] 2025-10-24 03:08:19,981 | INFO     | sum of deviations: -9292480811.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,981 | INFO     | mean x: 1761271960.5
[2025-10-23 23:09:05] 2025-10-24 03:08:19,981 | INFO     | mean y: 2523629.727272727
[2025-10-23 23:09:05] 2025-10-24 03:08:19,982 | INFO     | -- intersect: 39661135435.23937
[2025-10-23 23:09:05] 2025-10-24 03:08:19,982 | INFO     | intersect: 39661135435.23937
[2025-10-23 23:09:05] 2025-10-24 03:08:19,982 | INFO     | chi2: 0.8625301222123787
[2025-10-23 23:09:05] 2025-10-24 03:08:19,982 | INFO     | current chi2=0.8625301222123787 (change=62.16608311950215 %)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,982 | INFO     | sum of square deviations: 358927660.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,983 | INFO     | sum of deviations: -10411236793.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,983 | INFO     | mean x: 1761272113.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,983 | INFO     | mean y: 2526637.6952380952
[2025-10-23 23:09:05] 2025-10-24 03:08:19,983 | INFO     | -- intersect: 51090874148.58491
[2025-10-23 23:09:05] 2025-10-24 03:08:19,983 | INFO     | intersect: 51090874148.58491
[2025-10-23 23:09:05] 2025-10-24 03:08:19,984 | INFO     | chi2: 0.8373347988632587
[2025-10-23 23:09:05] 2025-10-24 03:08:19,984 | INFO     | current chi2=0.8373347988632587 (change=2.9210948928362432 %)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,984 | INFO     | left removable region: 20
[2025-10-23 23:09:05] 2025-10-24 03:08:19,984 | INFO     | sum of square deviations: 183761585.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | sum of deviations: -1898068497.0
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | mean x: 1761272082.5
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | mean y: 2546713.619047619
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | -- intersect: 18194678950.82649
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | intersect: 18194678950.82649
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | chi2: 0.001401065196332114
[2025-10-23 23:09:05] 2025-10-24 03:08:19,985 | INFO     | -- intersect: 18194678950.82649
[2025-10-23 23:09:05] 2025-10-24 03:08:19,986 | INFO     | current memory leak: -10.33 B/s (using 84 data points, chi2=0.00)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,986 | INFO     | could have reported an average CPU frequency of 2605 MHz (7 samples)
[2025-10-23 23:09:05] 2025-10-24 03:08:19,986 | INFO     | ..............................
[2025-10-23 23:09:05] 2025-10-24 03:08:19,986 | INFO     | . Timing measurements:
[2025-10-23 23:09:05] 2025-10-24 03:08:19,986 | INFO     | . get job = 0 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . initial setup = 2 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . payload setup = 5 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . stage-in = 0 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . payload execution = 6959 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . stage-out = 0 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | . log creation = 0 s
[2025-10-23 23:09:05] 2025-10-24 03:08:19,987 | INFO     | ..............................
[2025-10-23 23:09:05] 2025-10-24 03:08:20,095 | INFO     | 
[2025-10-23 23:09:05] 2025-10-24 03:08:20,096 | INFO     | job summary report
[2025-10-23 23:09:05] 2025-10-24 03:08:20,096 | INFO     | --------------------------------------------------
[2025-10-23 23:09:05] 2025-10-24 03:08:20,096 | INFO     | PanDA job id: 6853958081
[2025-10-23 23:09:05] 2025-10-24 03:08:20,096 | INFO     | task id: 46771637
[2025-10-23 23:09:05] 2025-10-24 03:08:20,096 | INFO     | errors: (none)
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | pilot state: finished 
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | transexitcode: 0
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | exeerrorcode: 0
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | exeerrordiag: 
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | exitcode: 0
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | exitmsg: OK
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | cpuconsumptiontime: 50567 s
[2025-10-23 23:09:05] 2025-10-24 03:08:20,097 | INFO     | nevents: 400
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | neventsw: 0
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | pid: 2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | pgrp: 2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | corecount: 8
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | event service: False
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | sizes: {0: 2348760, 1: 2348959, 4: 2349221, 11: 2349249, 6968: 2376530, 6969: 2376529, 6970: 2385711, 6972: 2385767, 6978: 2385961}
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | --------------------------------------------------
[2025-10-23 23:09:05] 2025-10-24 03:08:20,098 | INFO     | 
[2025-10-23 23:09:05] 2025-10-24 03:08:20,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-23 23:09:05] 2025-10-24 03:08:20,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 23:09:05] 2025-10-24 03:08:20,121 | INFO     | job 6853958081 has completed (purged errors)
[2025-10-23 23:09:05] 2025-10-24 03:08:20,122 | INFO     | overall cleanup function is called
[2025-10-23 23:09:05] 2025-10-24 03:08:20,393 | INFO     | PID=2753616 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 23:09:05] 2025-10-24 03:08:20,394 | INFO     | .. there are 5 such processes running
[2025-10-23 23:09:05] 2025-10-24 03:08:21,131 | INFO     | --- collectZombieJob: --- 10, [2760308]
[2025-10-23 23:09:05] 2025-10-24 03:08:21,131 | INFO     | zombie collector waiting for pid 2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:21,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 23:09:05] 2025-10-24 03:08:21,131 | INFO     | collected zombie processes
[2025-10-23 23:09:05] 2025-10-24 03:08:21,131 | INFO     | will attempt to kill all subprocesses of pid=2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:21,350 | INFO     | process IDs to be killed: [2760308] (in reverse order)
[2025-10-23 23:09:05] 2025-10-24 03:08:21,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 23:09:05] 2025-10-24 03:08:21,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 23:09:05] 2025-10-24 03:08:21,420 | INFO     | did not find any defunct processes belonging to 2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:21,425 | INFO     | did not find any defunct processes belonging to 2760308
[2025-10-23 23:09:05] 2025-10-24 03:08:21,426 | INFO     | ready for new job
[2025-10-23 23:09:05] 2025-10-24 03:08:21,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 23:09:05] 2025-10-24 03:08:21,428 | INFO     | ***************************************
[2025-10-23 23:09:05] 2025-10-24 03:08:21,428 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 23:09:05] 2025-10-24 03:08:21,428 | INFO     | ***************************************
[2025-10-23 23:09:05] 2025-10-24 03:08:21,428 | INFO     | 
[2025-10-23 23:09:05] 2025-10-24 03:08:21,430 | INFO     | architecture information:
[2025-10-23 23:09:05] 2025-10-24 03:08:21,430 | INFO     | executing command: cat /etc/os-release
[2025-10-23 23:09:05] 2025-10-24 03:08:21,442 | INFO     | cat /etc/os-release:
[2025-10-23 23:09:05] NAME="CentOS Linux"
[2025-10-23 23:09:05] VERSION="7 (Core)"
[2025-10-23 23:09:05] ID="centos"
[2025-10-23 23:09:05] ID_LIKE="rhel fedora"
[2025-10-23 23:09:05] VERSION_ID="7"
[2025-10-23 23:09:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 23:09:05] ANSI_COLOR="0;31"
[2025-10-23 23:09:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 23:09:05] HOME_URL="https://www.centos.org/"
[2025-10-23 23:09:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 23:09:05] 
[2025-10-23 23:09:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 23:09:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 23:09:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 23:09:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 23:09:05] 
[2025-10-23 23:09:05] 2025-10-24 03:08:21,442 | INFO     | ***************************************
[2025-10-23 23:09:05] 2025-10-24 03:08:21,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-23 23:09:05] 2025-10-24 03:08:21,959 | INFO     | sufficient remaining disk space (51520733184 B)
[2025-10-23 23:09:05] 2025-10-24 03:08:21,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 23:09:05] 2025-10-24 03:08:21,959 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 23:09:05] 2025-10-24 03:08:21,960 | INFO     | update_server=False
[2025-10-23 23:09:05] 2025-10-24 03:08:21,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 23:09:05] 2025-10-24 03:08:21,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 23:09:05] 2025-10-24 03:08:21,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 23:09:05] 2025-10-24 03:08:21,961 | INFO     | aborting loop
[2025-10-23 23:09:05] 2025-10-24 03:08:22,604 | INFO     | all data control threads have been joined
[2025-10-23 23:09:05] 2025-10-24 03:08:22,627 | INFO     | all job control threads have been joined
[2025-10-23 23:09:05] 2025-10-24 03:08:22,728 | INFO     | all payload control threads have been joined
[2025-10-23 23:09:05] 2025-10-24 03:08:22,965 | INFO     | [job] retrieve thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:22,965 | INFO     | [job] queue monitor thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:22,966 | INFO     | [job] job monitor thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:22,970 | INFO     | [job] validate thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,003 | INFO     | [data] copytool_in thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,197 | INFO     | [payload] validate_post thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 23:09:05] 2025-10-24 03:08:23,243 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,392 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,494 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,608 | INFO     | [data] control thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,632 | INFO     | [job] control thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:23,732 | INFO     | [payload] control thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:24,068 | INFO     | [payload] failed_post thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:25,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 23:09:05] 2025-10-24 03:08:25,241 | INFO     | [data] copytool_out thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:29,193 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 23:09:05] 2025-10-24 03:08:52,734 | INFO     | PID=2753616 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 23:09:05] 2025-10-24 03:08:52,734 | INFO     | .. there are 5 such processes running
[2025-10-23 23:09:05] 2025-10-24 03:08:52,734 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 23:09:05] 2025-10-24 03:08:52,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 23:09:05] 2025-10-24 03:08:52,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 23:09:05] 2025-10-24 03:08:58,024 | INFO     | [monitor] cgroup control has ended
[2025-10-23 23:09:05] 2025-10-24 03:08:59,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671138051904)>', '<ExcThread(monitor, started 140670496921344)>']
[2025-10-23 23:09:05] 2025-10-24 03:09:00,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 23:09:05] 2025-10-24 03:09:00,765 | INFO     | [monitor] control thread has ended
[2025-10-23 23:09:05] 2025-10-24 03:09:04,992 | INFO     | all workflow threads have been joined
[2025-10-23 23:09:05] 2025-10-24 03:09:04,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 23:09:05] 2025-10-24 03:09:04,993 | INFO     | traces error code: 0
[2025-10-23 23:09:05] 2025-10-24 03:09:04,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 23:09:05] 2025-10-24 03:09:05,096 [wrapper] ==== pilot stdout END ====
[2025-10-23 23:09:05] 2025-10-24 03:09:05,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 23:09:05] 2025-10-24 03:09:05,100 [wrapper] pilotpid: 2753616
[2025-10-23 23:09:05] 2025-10-24 03:09:05,102 [wrapper] Pilot exit status: 0
[2025-10-23 23:09:05] 2025-10-24 03:09:05,112 [wrapper] pandaids: 6853958081
[2025-10-23 23:09:05] 2025-10-24 03:09:05,156 [wrapper] cleanup supervisor_pilot 2982581 2753617
[2025-10-23 23:09:05] 2025-10-24 03:09:05,158 [wrapper] Test setup, not cleaning
[2025-10-23 23:09:05] 2025-10-24 03:09:05,161 [wrapper] apfmon messages muted
[2025-10-23 23:09:05] 2025-10-24 03:09:05,163 [wrapper] ==== wrapper stdout END ====
[2025-10-23 23:09:05] 2025-10-24 03:09:05,165 [wrapper] ==== wrapper stderr END ====
[2025-10-23 23:09:05]  *** Error codes and diagnostics ***
[2025-10-23 23:09:05]     "exeErrorCode": 0,
[2025-10-23 23:09:05]     "exeErrorDiag": "",
[2025-10-23 23:09:05]     "pilotErrorCode": 0,
[2025-10-23 23:09:05]     "pilotErrorDiag": "",
[2025-10-23 23:09:05]  *** Listing of results directory ***
[2025-10-23 23:09:05] total 438712
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 18:49 pilot3.tar.gz
[2025-10-23 23:09:05] -rwx------. 1 boincer umatlas     36292 Oct 22 19:33 runpilot2-wrapper.sh
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 19:33 queuedata.json
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas       100 Oct 23 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 23:09:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 21:11 run_atlas
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas       105 Oct 23 21:11 job.xml
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas 230244903 Oct 23 21:11 EVNT.46771634._003892.pool.root.1
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:11 start_atlas.sh
[2025-10-23 23:09:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 21:11 shared
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas    569672 Oct 23 21:11 input.tar.gz
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas         0 Oct 23 21:11 boinc_lockfile
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas      2560 Oct 23 21:11 pandaJob.out
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas    978566 Oct 23 21:11 agis_schedconf.cvmfs.json
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas   1560740 Oct 23 21:11 agis_ddmendpoints.agis.ALL.json
[2025-10-23 23:09:05] drwx------. 5 boincer umatlas      4096 Oct 23 21:11 pilot3
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas      6659 Oct 23 23:04 init_data.xml
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas       529 Oct 23 23:07 boinc_task_state.xml
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas 212346525 Oct 23 23:07 HITS.46771637._095742.pool.root.1
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas        95 Oct 23 23:07 pilot_heartbeat.json
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas      1034 Oct 23 23:08 memory_monitor_summary.json
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas    363703 Oct 23 23:08 log.46771637._095742.job.log.tgz.1
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas      7815 Oct 23 23:08 heartbeat.json
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas        27 Oct 23 23:09 wrapper_checkpoint.txt
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 23:09 boinc_mmap_file
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas      4823 Oct 23 23:09 pilotlog.txt
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas   1011316 Oct 23 23:09 log.46771637._095742.job.log.1
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas       357 Oct 23 23:09 output.list
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas       620 Oct 23 23:09 runtime_log
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas   1392640 Oct 23 23:09 result.tar.gz
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas      8703 Oct 23 23:09 runtime_log.err
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas       651 Oct 23 23:09 oAHKDmYVxV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme46NDmuU9pEm.diag
[2025-10-23 23:09:05] -rw-r--r--. 1 boincer umatlas     21005 Oct 23 23:09 stderr.txt
[2025-10-23 23:09:05] HITS file was successfully produced:
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas 212346525 Oct 23 23:07 shared/HITS.pool.root.1
[2025-10-23 23:09:05]  *** Contents of shared directory: ***
[2025-10-23 23:09:05] total 434164
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas 230244903 Oct 23 21:11 ATLAS.root_0
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:11 start_atlas.sh
[2025-10-23 23:09:05] -rw-r--r--. 2 boincer umatlas    569672 Oct 23 21:11 input.tar.gz
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas 212346525 Oct 23 23:07 HITS.pool.root.1
[2025-10-23 23:09:05] -rw-------. 1 boincer umatlas   1392640 Oct 23 23:09 result.tar.gz
23:09:07 (2749960): run_atlas exited; CPU time 50715.955245
23:09:07 (2749960): called boinc_finish(0)

</stderr_txt>
]]>

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