Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:12:52 (1208891): wrapper (7.7.26015): starting
21:12:52 (1208891): wrapper: running run_atlas (--nthreads 10)
[2025-10-23 21:12:52] Arguments: --nthreads 10
[2025-10-23 21:12:52] Threads: 10
[2025-10-23 21:12:52] Checking for CVMFS
[2025-10-23 21:12:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 21:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 21:12:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 21:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 21:12:53] 2.13.2.0 2754702 145849 553076 152055 1 889 26926213 32935936 27812 16776704 0 1124563651 99.720 831541127 33255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-23 21:12:53] CVMFS is ok
[2025-10-23 21:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 21:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 21:12:54] Further information can be found at the LHC@home message board.
[2025-10-23 21:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 21:12:54] Checking for apptainer binary...
[2025-10-23 21:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 21:12:54] Running /usr/bin/apptainer --version
[2025-10-23 21:12:54] apptainer version 1.4.3-1.el9
[2025-10-23 21:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 21:12:54] c7-9-14.aglt2.org
[2025-10-23 21:12:54] apptainer works
[2025-10-23 21:12:54] Set ATHENA_PROC_NUMBER=10
[2025-10-23 21:12:54] Set ATHENA_CORE_NUMBER=10
[2025-10-23 21:12:54] Starting ATLAS job with PandaID=6852943842
[2025-10-23 21:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:20:08 (1208891): BOINC client no longer exists - exiting
21:20:08 (1208891): timer handler: client dead, exiting
21:29:13 (1294120): wrapper (7.7.26015): starting
21:29:13 (1294120): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 21:29:13] Arguments: --nthreads 8
[2025-10-23 21:29:13] Threads: 8
[2025-10-23 21:29:13] This job has been restarted, cleaning up previous attempt
[2025-10-23 21:29:13] Checking for CVMFS
[2025-10-23 21:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 21:29:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 21:29:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 21:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 21:29:13] 2.13.2.0 2754702 145866 540384 152056 1 489 26943834 32935937 25527 16776704 0 1124738520 99.720 831542643 33255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-23 21:29:13] CVMFS is ok
[2025-10-23 21:29:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 21:29:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 21:29:13] Further information can be found at the LHC@home message board.
[2025-10-23 21:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 21:29:13] Checking for apptainer binary...
[2025-10-23 21:29:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 21:29:13] Running /usr/bin/apptainer --version
[2025-10-23 21:29:14] apptainer version 1.4.3-1.el9
[2025-10-23 21:29:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 21:29:14] c7-9-14.aglt2.org
[2025-10-23 21:29:14] apptainer works
[2025-10-23 21:29:14] Set ATHENA_PROC_NUMBER=8
[2025-10-23 21:29:14] Set ATHENA_CORE_NUMBER=8
[2025-10-23 21:29:14] Starting ATLAS job with PandaID=6852943842
[2025-10-23 21:29:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 00:16:04]  *** The last 200 lines of the pilot log: ***
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | mean x: 1761274202.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | mean y: 2140615.6242038216
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | -- intersect: -36596523512.07347
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | intersect: -36596523512.07347
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | chi2: 1.4130486078126987
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | current chi2=1.4130486078126987 (change=33.92522624062142 %)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,160 | INFO     | sum of square deviations: 1088905998.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | sum of deviations: 24215310635.499996
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | mean x: 1761274049.5
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | mean y: 2139625.572368421
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | -- intersect: -39165426997.46271
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | intersect: -39165426997.46271
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | chi2: 1.4126781324462987
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | current chi2=1.4126781324462987 (change=0.02621816152336563 %)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | right removable region: 151
[2025-10-24 00:16:04] 2025-10-24 04:15:29,161 | INFO     | sum of square deviations: 1199940638.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | sum of deviations: -5056189838.000002
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | mean x: 1761274507.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | mean y: 2156265.541401274
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | -- intersect: 7423638614.088932
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | intersect: 7423638614.088932
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | chi2: 0.7898555153375246
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | current chi2=0.7898555153375246 (change=63.06600906014827 %)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | sum of square deviations: 1088905998.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | sum of deviations: -7292997892.500001
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | mean x: 1761274659.5
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | mean y: 2159306.164473684
[2025-10-24 00:16:04] 2025-10-24 04:15:29,165 | INFO     | -- intersect: 11798377164.675303
[2025-10-24 00:16:04] 2025-10-24 04:15:29,166 | INFO     | intersect: 11798377164.675303
[2025-10-24 00:16:04] 2025-10-24 04:15:29,166 | INFO     | chi2: 0.7743570754383774
[2025-10-24 00:16:04] 2025-10-24 04:15:29,166 | INFO     | current chi2=0.7743570754383774 (change=1.9621867035421496 %)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,166 | INFO     | left removable region: 20
[2025-10-24 00:16:04] 2025-10-24 04:15:29,169 | INFO     | sum of square deviations: 697054930.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | sum of deviations: 1155715333.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | mean x: 1761274629.0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | mean y: 2173499.282442748
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | -- intersect: -2918015436.701679
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | intersect: -2918015436.701679
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | chi2: 0.02697466288468329
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | -- intersect: -2918015436.701679
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | current memory leak: 1.66 B/s (using 131 data points, chi2=0.03)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,170 | INFO     | could have reported an average CPU frequency of 3690 MHz (9 samples)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | ..............................
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . Timing measurements:
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . get job = 0 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . initial setup = 1 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . payload setup = 16 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . stage-in = 0 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . payload execution = 9860 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . stage-out = 3 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | . log creation = 0 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,171 | INFO     | ..............................
[2025-10-24 00:16:04] 2025-10-24 04:15:29,178 | INFO     | sufficient remaining disk space (70195871744 B)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,178 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,179 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6852943842: 3196691 B (within 2537553920 B limit)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,179 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6852943842/HITS.46771637._051985.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,179 | INFO     | total size of present files: 0 B (workdir size: 3196691 B)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,179 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6852943842/HITS.46771637._051985.pool.root.1 since it does not exist
[2025-10-24 00:16:04] 2025-10-24 04:15:29,376 | INFO     | time since job start (9949s) is within the limit (172800.0s)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | 
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | job summary report
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | --------------------------------------------------
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | PanDA job id: 6852943842
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | task id: 46771637
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | errors: (none)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | pilot state: finished 
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | transexitcode: 0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | exeerrorcode: 0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | exeerrordiag: 
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | exitcode: 0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | exitmsg: OK
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | cpuconsumptiontime: 26004 s
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | nevents: 400
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | neventsw: 0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | pid: 1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | pgrp: 1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | corecount: 8
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | event service: False
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | sizes: {0: 2348929, 11: 2349219, 21: 2349219, 9878: 2377956, 9881: 2386954, 9885: 2387010, 9915: 2387424}
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | --------------------------------------------------
[2025-10-24 00:16:04] 2025-10-24 04:15:29,379 | INFO     | 
[2025-10-24 00:16:04] 2025-10-24 04:15:29,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 00:16:04] 2025-10-24 04:15:29,460 | INFO     | job 6852943842 has completed (purged errors)
[2025-10-24 00:16:04] 2025-10-24 04:15:29,460 | INFO     | overall cleanup function is called
[2025-10-24 00:16:04] 2025-10-24 04:15:29,816 | INFO     | number of running child processes to parent process 1367423: 1
[2025-10-24 00:16:04] 2025-10-24 04:15:29,816 | INFO     | maximum number of monitored processes: 6
[2025-10-24 00:16:04] 2025-10-24 04:15:29,816 | INFO     | aborting job monitoring since job object (job id=6852943842) has expired
[2025-10-24 00:16:04] 2025-10-24 04:15:30,471 | INFO     | --- collectZombieJob: --- 10, [1367423]
[2025-10-24 00:16:04] 2025-10-24 04:15:30,472 | INFO     | zombie collector waiting for pid 1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:30,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 00:16:04] 2025-10-24 04:15:30,472 | INFO     | collected zombie processes
[2025-10-24 00:16:04] 2025-10-24 04:15:30,472 | INFO     | will attempt to kill all subprocesses of pid=1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:31,237 | INFO     | process IDs to be killed: [1367423] (in reverse order)
[2025-10-24 00:16:04] 2025-10-24 04:15:31,373 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 00:16:04] 2025-10-24 04:15:31,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 00:16:04] 2025-10-24 04:15:31,394 | INFO     | did not find any defunct processes belonging to 1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:31,415 | INFO     | did not find any defunct processes belonging to 1367423
[2025-10-24 00:16:04] 2025-10-24 04:15:31,415 | INFO     | ready for new job
[2025-10-24 00:16:04] 2025-10-24 04:15:31,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 00:16:04] 2025-10-24 04:15:31,417 | INFO     | ***************************************
[2025-10-24 00:16:04] 2025-10-24 04:15:31,417 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 00:16:04] 2025-10-24 04:15:31,417 | INFO     | ***************************************
[2025-10-24 00:16:04] 2025-10-24 04:15:31,417 | INFO     | 
[2025-10-24 00:16:04] 2025-10-24 04:15:31,423 | INFO     | architecture information:
[2025-10-24 00:16:04] 2025-10-24 04:15:31,425 | INFO     | executing command: cat /etc/os-release
[2025-10-24 00:16:04] 2025-10-24 04:15:31,513 | INFO     | cat /etc/os-release:
[2025-10-24 00:16:04] NAME="CentOS Linux"
[2025-10-24 00:16:04] VERSION="7 (Core)"
[2025-10-24 00:16:04] ID="centos"
[2025-10-24 00:16:04] ID_LIKE="rhel fedora"
[2025-10-24 00:16:04] VERSION_ID="7"
[2025-10-24 00:16:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 00:16:04] ANSI_COLOR="0;31"
[2025-10-24 00:16:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 00:16:04] HOME_URL="https://www.centos.org/"
[2025-10-24 00:16:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 00:16:04] 
[2025-10-24 00:16:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 00:16:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 00:16:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 00:16:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 00:16:04] 
[2025-10-24 00:16:04] 2025-10-24 04:15:31,513 | INFO     | ***************************************
[2025-10-24 00:16:04] 2025-10-24 04:15:32,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-24 00:16:04] 2025-10-24 04:15:32,103 | INFO     | sufficient remaining disk space (70199017472 B)
[2025-10-24 00:16:04] 2025-10-24 04:15:32,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 00:16:04] 2025-10-24 04:15:32,104 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 00:16:04] 2025-10-24 04:15:32,104 | INFO     | update_server=False
[2025-10-24 00:16:04] 2025-10-24 04:15:32,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 00:16:04] 2025-10-24 04:15:32,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 00:16:04] 2025-10-24 04:15:32,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-24 00:16:04] 2025-10-24 04:15:32,322 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-24 00:16:04] 2025-10-24 04:15:32,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 00:16:04] 2025-10-24 04:15:32,322 | INFO     | will abort loop
[2025-10-24 00:16:04] 2025-10-24 04:15:32,493 | INFO     | all data control threads have been joined
[2025-10-24 00:16:04] 2025-10-24 04:15:33,110 | INFO     | [job] retrieve thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,118 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,118 | INFO     | [payload] validate_post thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,160 | INFO     | [data] copytool_in thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,330 | INFO     | [job] job monitor thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,406 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 00:16:04] 2025-10-24 04:15:33,427 | INFO     | all payload control threads have been joined
[2025-10-24 00:16:04] 2025-10-24 04:15:33,490 | INFO     | all job control threads have been joined
[2025-10-24 00:16:04] 2025-10-24 04:15:33,500 | INFO     | [data] control thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:33,704 | INFO     | [payload] failed_post thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:34,183 | INFO     | [job] validate thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:34,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 00:16:04] 2025-10-24 04:15:34,434 | INFO     | [payload] control thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:34,497 | INFO     | [job] control thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:34,575 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:35,401 | INFO     | [job] queue monitor thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:35,424 | INFO     | [data] copytool_out thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:36,121 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:42,942 | INFO     | job.realtimelogging is not enabled
[2025-10-24 00:16:04] 2025-10-24 04:15:43,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 00:16:04] 2025-10-24 04:15:57,541 | INFO     | [monitor] cgroup control has ended
[2025-10-24 00:16:04] 2025-10-24 04:15:58,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399168309056)>', '<ExcThread(monitor, started 140398521480960)>']
[2025-10-24 00:16:04] 2025-10-24 04:16:02,902 | INFO     | PID=1320049 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 00:16:04] 2025-10-24 04:16:02,902 | INFO     | .. there are 39 such processes running
[2025-10-24 00:16:04] 2025-10-24 04:16:02,902 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 00:16:04] 2025-10-24 04:16:02,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 00:16:04] 2025-10-24 04:16:02,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 00:16:04] 2025-10-24 04:16:02,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 00:16:04] 2025-10-24 04:16:02,903 | INFO     | [monitor] control thread has ended
[2025-10-24 00:16:04] 2025-10-24 04:16:03,505 | INFO     | all workflow threads have been joined
[2025-10-24 00:16:04] 2025-10-24 04:16:03,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 00:16:04] 2025-10-24 04:16:03,506 | INFO     | traces error code: 0
[2025-10-24 00:16:04] 2025-10-24 04:16:03,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 00:16:04] 2025-10-24 04:16:03,639 [wrapper] ==== pilot stdout END ====
[2025-10-24 00:16:04] 2025-10-24 04:16:03,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 00:16:04] 2025-10-24 04:16:03,653 [wrapper] pilotpid: 1320049
[2025-10-24 00:16:04] 2025-10-24 04:16:03,658 [wrapper] Pilot exit status: 0
[2025-10-24 00:16:04] 2025-10-24 04:16:03,695 [wrapper] pandaids: 6852943842 6852943842
[2025-10-24 00:16:04] 2025-10-24 04:16:03,805 [wrapper] cleanup supervisor_pilot 2197347 1320050
[2025-10-24 00:16:04] 2025-10-24 04:16:03,809 [wrapper] Test setup, not cleaning
[2025-10-24 00:16:04] 2025-10-24 04:16:03,816 [wrapper] apfmon messages muted
[2025-10-24 00:16:04] 2025-10-24 04:16:03,826 [wrapper] ==== wrapper stdout END ====
[2025-10-24 00:16:04] 2025-10-24 04:16:03,831 [wrapper] ==== wrapper stderr END ====
[2025-10-24 00:16:04]  *** Error codes and diagnostics ***
[2025-10-24 00:16:04]     "exeErrorCode": 0,
[2025-10-24 00:16:04]     "exeErrorDiag": "",
[2025-10-24 00:16:04]     "pilotErrorCode": 0,
[2025-10-24 00:16:04]     "pilotErrorDiag": "",
[2025-10-24 00:16:04]  *** Listing of results directory ***
[2025-10-24 00:16:04] total 654316
[2025-10-24 00:16:04] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-24 00:16:04] -rwx------. 1 boincer umatlas     36292 Oct 20 17:37 runpilot2-wrapper.sh
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:37 queuedata.json
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas       100 Oct 23 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 00:16:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 21:12 run_atlas
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas       105 Oct 23 21:12 job.xml
[2025-10-24 00:16:04] -rw-r--r--. 3 boincer umatlas 229596466 Oct 23 21:12 EVNT.46771634._001025.pool.root.1
[2025-10-24 00:16:04] -rw-r--r--. 3 boincer umatlas 229596466 Oct 23 21:12 ATLAS.root_0
[2025-10-24 00:16:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:12 start_atlas.sh
[2025-10-24 00:16:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 21:12 shared
[2025-10-24 00:16:04] -rw-r--r--. 2 boincer umatlas    569674 Oct 23 21:12 input.tar.gz
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas         0 Oct 23 21:12 boinc_lockfile
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas      2559 Oct 23 21:29 pandaJob.out
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas    978558 Oct 23 21:29 agis_schedconf.cvmfs.json
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas      7163 Oct 24 00:09 init_data.xml
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas 203558809 Oct 24 00:14 HITS.46771637._051985.pool.root.1
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas       529 Oct 24 00:14 boinc_task_state.xml
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas      1051 Oct 24 00:14 memory_monitor_summary.json
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas   1560740 Oct 24 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas    385671 Oct 24 00:14 log.46771637._051985.job.log.tgz.1
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas      7797 Oct 24 00:15 heartbeat.json
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas        96 Oct 24 00:16 pilot_heartbeat.json
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas        27 Oct 24 00:16 wrapper_checkpoint.txt
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas      5082 Oct 24 00:16 pilotlog.txt
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas   1292433 Oct 24 00:16 log.46771637._051985.job.log.1
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 00:16 boinc_mmap_file
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas       357 Oct 24 00:16 output.list
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas       620 Oct 24 00:16 runtime_log
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas   1699840 Oct 24 00:16 result.tar.gz
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas      8784 Oct 24 00:16 runtime_log.err
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas       782 Oct 24 00:16 i0vKDmlkCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcsdMDmxM4j1m.diag
[2025-10-24 00:16:04] -rw-r--r--. 1 boincer umatlas     23729 Oct 24 00:16 stderr.txt
[2025-10-24 00:16:04] HITS file was successfully produced:
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas 203558809 Oct 24 00:14 shared/HITS.pool.root.1
[2025-10-24 00:16:04]  *** Contents of shared directory: ***
[2025-10-24 00:16:04] total 425248
[2025-10-24 00:16:04] -rw-r--r--. 3 boincer umatlas 229596466 Oct 23 21:12 ATLAS.root_0
[2025-10-24 00:16:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 21:12 start_atlas.sh
[2025-10-24 00:16:04] -rw-r--r--. 2 boincer umatlas    569674 Oct 23 21:12 input.tar.gz
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas 203558809 Oct 24 00:14 HITS.pool.root.1
[2025-10-24 00:16:04] -rw-------. 1 boincer umatlas   1699840 Oct 24 00:16 result.tar.gz
00:16:05 (1294120): run_atlas exited; CPU time 26224.659013
00:16:05 (1294120): called boinc_finish(0)

</stderr_txt>
]]>

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