Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
03:40:48 (14567): wrapper (7.7.26015): starting
03:40:48 (14567): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 03:40:48] Arguments: --nthreads 8
[2025-10-24 03:40:48] Threads: 8
[2025-10-24 03:40:48] Checking for CVMFS
[2025-10-24 03:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 03:40:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 03:40:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 03:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 03:40:48] 2.11.0.0 4270 17323 72472 152056 3 1 2411331 4096000 0 130560 0 4202068 99.559 3313576 985 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-24 03:40:48] CVMFS is ok
[2025-10-24 03:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 03:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 03:40:48] Further information can be found at the LHC@home message board.
[2025-10-24 03:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 03:40:48] Checking for apptainer binary...
[2025-10-24 03:40:48] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-24 03:40:48] apptainer is not installed, using version from CVMFS
[2025-10-24 03:40:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 03:40:48] WARNING: Environment variable TMPDIR already has value [/tmp/job_10715359/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node288
[2025-10-24 03:40:48] apptainer works
[2025-10-24 03:40:48] Set ATHENA_PROC_NUMBER=8
[2025-10-24 03:40:48] Set ATHENA_CORE_NUMBER=8
[2025-10-24 03:40:49] Starting ATLAS job with PandaID=6854664990
[2025-10-24 03:40:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10715359/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 04:33:14]  *** The last 200 lines of the pilot log: ***
[2025-10-24 04:33:14]  replicas=None
[2025-10-24 04:33:14]  scope=mc23_13p6TeV
[2025-10-24 04:33:14]  status=None
[2025-10-24 04:33:14]  status_code=0
[2025-10-24 04:33:14]  storage_token=
[2025-10-24 04:33:14]  surl=/tmp/job_10715359/atlas/pilot/slots/0/PanDA_Pilot-6854664990/log.46771637._106731.job.log.tgz.1
[2025-10-24 04:33:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/fb/log.46771637._106731.job.log.tgz.1
[2025-10-24 04:33:14]  workdir=None
[2025-10-24 04:33:14] ]
[2025-10-24 04:33:14] 2025-10-24 02:32:38,605 | INFO     | transferring file log.46771637._106731.job.log.tgz.1 from /tmp/job_10715359/atlas/pilot/slots/0/PanDA_Pilot-6854664990/log.46771637._106731.job.log.tgz.1 to /tmp/j
[2025-10-24 04:33:14] 2025-10-24 02:32:38,605 | INFO     | executing command: /usr/bin/env mv /tmp/job_10715359/atlas/pilot/slots/0/PanDA_Pilot-6854664990/log.46771637._106731.job.log.tgz.1 /tmp/job_10715359/atlas/pilot/sl
[2025-10-24 04:33:14] 2025-10-24 02:32:38,613 | INFO     | adding to output.list: log.46771637._106731.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/fb/log.46771637._106731.job.log.tg
[2025-10-24 04:33:14] 2025-10-24 02:32:38,613 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 04:33:14] 2025-10-24 02:32:38,613 | INFO     | summary of transferred files:
[2025-10-24 04:33:14] 2025-10-24 02:32:38,614 | INFO     |  -- lfn=log.46771637._106731.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 04:33:14] 2025-10-24 02:32:38,614 | INFO     | stage-out finished correctly
[2025-10-24 04:33:14] 2025-10-24 02:32:38,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 04:33:14] 2025-10-24 02:32:38,934 | INFO     | time since job start (3104s) is within the limit (172800.0s)
[2025-10-24 04:33:14] 2025-10-24 02:32:39,375 | WARNING  | process 27350 can no longer be monitored (due to stat problems) - aborting
[2025-10-24 04:33:14] 2025-10-24 02:32:39,375 | INFO     | using path: /tmp/job_10715359/atlas/pilot/slots/0/PanDA_Pilot-6854664990/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 04:33:14] 2025-10-24 02:32:39,466 | INFO     | number of running child processes to parent process 27350: 1
[2025-10-24 04:33:14] 2025-10-24 02:32:39,466 | INFO     | maximum number of monitored processes: 6
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | job 6854664990 has state=finished
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | preparing for final server update for job 6854664990 in state='finished'
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | this job has now completed (state=finished)
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | log transfer has been attempted: DONE
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | job 6854664990 has finished - writing final server update
[2025-10-24 04:33:14] 2025-10-24 02:32:40,091 | INFO     | total number of processed events: 400 (read)
[2025-10-24 04:33:14] 2025-10-24 02:32:40,092 | INFO     | executing command: lscpu
[2025-10-24 04:33:14] 2025-10-24 02:32:40,124 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 04:33:14] 2025-10-24 02:32:40,940 | INFO     | time since job start (3106s) is within the limit (172800.0s)
[2025-10-24 04:33:14] 2025-10-24 02:32:41,839 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 04:33:14] 2025-10-24 02:32:41,856 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2608.2032343749997
[2025-10-24 04:33:14] 2025-10-24 02:32:41,861 | INFO     | using path: /tmp/job_10715359/atlas/pilot/slots/0/PanDA_Pilot-6854664990/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 04:33:14] 2025-10-24 02:32:41,862 | INFO     | extracted standard info from prmon json
[2025-10-24 04:33:14] 2025-10-24 02:32:41,862 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 04:33:14] 2025-10-24 02:32:41,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 04:33:14] 2025-10-24 02:32:41,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 04:33:14] 2025-10-24 02:32:41,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | fitting pss+swap vs Time
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | sum of square deviations: 26400495.0
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | sum of deviations: -1426095332.0000002
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | mean x: 1761271688.5
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | mean y: 2586206.909090909
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | -- intersect: 95142519505.6449
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | intersect: 95142519505.6449
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | chi2: 0.006487581656558126
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | -- intersect: 95142519505.6449
[2025-10-24 04:33:14] 2025-10-24 02:32:41,863 | INFO     | current memory leak: -54.02 B/s (using 44 data points, chi2=0.01)
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | could have reported an average CPU frequency of 2504 MHz (5 samples)
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | ..............................
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . Timing measurements:
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . get job = 0 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . initial setup = 1 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . payload setup = 2 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . stage-in = 0 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . payload execution = 3085 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . stage-out = 0 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | . log creation = 0 s
[2025-10-24 04:33:14] 2025-10-24 02:32:41,864 | INFO     | ..............................
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | 
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | job summary report
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | --------------------------------------------------
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | PanDA job id: 6854664990
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | task id: 46771637
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | errors: (none)
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | pilot state: finished 
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | transexitcode: 0
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | exeerrorcode: 0
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | exeerrordiag: 
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | exitcode: 0
[2025-10-24 04:33:14] 2025-10-24 02:32:42,320 | INFO     | exitmsg: OK
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | cpuconsumptiontime: 22405 s
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | nevents: 400
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | neventsw: 0
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | pid: 27350
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | pgrp: 27350
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | corecount: 8
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | event service: False
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | sizes: {0: 2349061, 2: 2349323, 11: 2349351, 3091: 2374931, 3092: 2384014, 3095: 2384184}
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | --------------------------------------------------
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | 
[2025-10-24 04:33:14] 2025-10-24 02:32:42,321 | INFO     | executing command: ls -lF /tmp/job_10715359/atlas/pilot/slots/0
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | job 6854664990 has completed (purged errors)
[2025-10-24 04:33:14] 2025-10-24 02:32:42,331 | INFO     | overall cleanup function is called
[2025-10-24 04:33:14] 2025-10-24 02:32:43,337 | INFO     | --- collectZombieJob: --- 10, [27350]
[2025-10-24 04:33:14] 2025-10-24 02:32:43,337 | INFO     | zombie collector waiting for pid 27350
[2025-10-24 04:33:14] 2025-10-24 02:32:43,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 04:33:14] 2025-10-24 02:32:43,337 | INFO     | collected zombie processes
[2025-10-24 04:33:14] 2025-10-24 02:32:43,337 | INFO     | will attempt to kill all subprocesses of pid=27350
[2025-10-24 04:33:14] 2025-10-24 02:32:43,431 | INFO     | process IDs to be killed: [27350] (in reverse order)
[2025-10-24 04:33:14] 2025-10-24 02:32:43,464 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 04:33:14] 2025-10-24 02:32:43,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 04:33:14] 2025-10-24 02:32:43,468 | INFO     | did not find any defunct processes belonging to 27350
[2025-10-24 04:33:14] 2025-10-24 02:32:43,470 | INFO     | did not find any defunct processes belonging to 27350
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | ready for new job
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | ***************************************
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | ***************************************
[2025-10-24 04:33:14] 2025-10-24 02:32:43,471 | INFO     | 
[2025-10-24 04:33:14] 2025-10-24 02:32:43,485 | INFO     | architecture information:
[2025-10-24 04:33:14] 2025-10-24 02:32:43,485 | INFO     | executing command: cat /etc/os-release
[2025-10-24 04:33:14] 2025-10-24 02:32:43,491 | INFO     | cat /etc/os-release:
[2025-10-24 04:33:14] NAME="CentOS Linux"
[2025-10-24 04:33:14] VERSION="7 (Core)"
[2025-10-24 04:33:14] ID="centos"
[2025-10-24 04:33:14] ID_LIKE="rhel fedora"
[2025-10-24 04:33:14] VERSION_ID="7"
[2025-10-24 04:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 04:33:14] ANSI_COLOR="0;31"
[2025-10-24 04:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 04:33:14] HOME_URL="https://www.centos.org/"
[2025-10-24 04:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 04:33:14] 
[2025-10-24 04:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 04:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 04:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 04:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 04:33:14] 
[2025-10-24 04:33:14] 2025-10-24 02:32:43,491 | INFO     | ***************************************
[2025-10-24 04:33:14] 2025-10-24 02:32:43,994 | INFO     | executing command: df -mP /tmp/job_10715359/atlas/pilot/slots/0
[2025-10-24 04:33:14] 2025-10-24 02:32:44,001 | INFO     | sufficient remaining disk space (227413065728 B)
[2025-10-24 04:33:14] 2025-10-24 02:32:44,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 04:33:14] 2025-10-24 02:32:44,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 04:33:14] 2025-10-24 02:32:44,001 | INFO     | update_server=False
[2025-10-24 04:33:14] 2025-10-24 02:32:44,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 04:33:14] 2025-10-24 02:32:44,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 04:33:14] 2025-10-24 02:32:44,220 | INFO     | all data control threads have been joined
[2025-10-24 04:33:14] 2025-10-24 02:32:44,373 | INFO     | all job control threads have been joined
[2025-10-24 04:33:14] 2025-10-24 02:32:44,471 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-24 04:33:14] 2025-10-24 02:32:44,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-24 04:33:14] 2025-10-24 02:32:44,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 04:33:14] 2025-10-24 02:32:44,472 | INFO     | will abort loop
[2025-10-24 04:33:14] 2025-10-24 02:32:44,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 04:33:14] 2025-10-24 02:32:44,857 | INFO     | job.realtimelogging is not enabled
[2025-10-24 04:33:14] 2025-10-24 02:32:44,966 | INFO     | all payload control threads have been joined
[2025-10-24 04:33:14] 2025-10-24 02:32:45,007 | INFO     | [job] retrieve thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,226 | INFO     | [data] control thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,229 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,378 | INFO     | [job] control thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,413 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,477 | INFO     | [job] job monitor thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,639 | INFO     | [payload] validate_post thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,679 | INFO     | [data] copytool_in thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:45,971 | INFO     | [payload] control thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:46,178 | INFO     | [data] copytool_out thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:46,321 | INFO     | [job] validate thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:46,448 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:46,595 | INFO     | [payload] failed_post thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:46,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 04:33:14] 2025-10-24 02:32:47,929 | INFO     | [job] queue monitor thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:48,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 04:33:14] 2025-10-24 02:32:58,724 | INFO     | [monitor] cgroup control has ended
[2025-10-24 04:33:14] 2025-10-24 02:33:00,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062568192)>']
[2025-10-24 04:33:14] 2025-10-24 02:33:05,257 | INFO     | all workflow threads have been joined
[2025-10-24 04:33:14] 2025-10-24 02:33:05,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 04:33:14] 2025-10-24 02:33:05,257 | INFO     | traces error code: 0
[2025-10-24 04:33:14] 2025-10-24 02:33:05,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 04:33:14] 2025-10-24 02:33:14,123 | INFO     | PID=19359 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 04:33:14] 2025-10-24 02:33:14,123 | INFO     | .. there are 3 such processes running
[2025-10-24 04:33:14] 2025-10-24 02:33:14,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 04:33:14] 2025-10-24 02:33:14,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 04:33:14] 2025-10-24 02:33:14,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 04:33:14] 2025-10-24 02:33:14,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 04:33:14] 2025-10-24 02:33:14,124 | CRITICAL | thread 'MainThread' is not alive
[2025-10-24 04:33:14] 2025-10-24 02:33:14,124 | INFO     | [monitor] control thread has ended
[2025-10-24 04:33:14] 2025-10-24 02:33:14,177 [wrapper] ==== pilot stdout END ====
[2025-10-24 04:33:14] 2025-10-24 02:33:14,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 04:33:14] 2025-10-24 02:33:14,179 [wrapper] pilotpid: 19359
[2025-10-24 04:33:14] 2025-10-24 02:33:14,180 [wrapper] Pilot exit status: 0
[2025-10-24 04:33:14] 2025-10-24 02:33:14,185 [wrapper] pandaids: 6854664990
[2025-10-24 04:33:14] 2025-10-24 02:33:14,207 [wrapper] cleanup supervisor_pilot   600 19360
[2025-10-24 04:33:14] 2025-10-24 02:33:14,208 [wrapper] Test setup, not cleaning
[2025-10-24 04:33:14] 2025-10-24 02:33:14,209 [wrapper] apfmon messages muted
[2025-10-24 04:33:14] 2025-10-24 02:33:14,210 [wrapper] ==== wrapper stdout END ====
[2025-10-24 04:33:14] 2025-10-24 02:33:14,211 [wrapper] ==== wrapper stderr END ====
[2025-10-24 04:33:14]  *** Error codes and diagnostics ***
[2025-10-24 04:33:14]     "exeErrorCode": 0,
[2025-10-24 04:33:14]     "exeErrorDiag": "",
[2025-10-24 04:33:14]     "pilotErrorCode": 0,
[2025-10-24 04:33:14]     "pilotErrorDiag": "",
[2025-10-24 04:33:14]  *** Listing of results directory ***
[2025-10-24 04:33:14] total 434904
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    557409 Oct 23 15:25 pilot3.tar.gz
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      5112 Oct 23 16:22 queuedata.json
[2025-10-24 04:33:14] -rwx------ 1 mf493845 unix-user     36292 Oct 23 16:23 runpilot2-wrapper.sh
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       100 Oct 24 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 04:33:14] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 24 02:43 run_atlas
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       105 Oct 24 02:43 job.xml
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user    569693 Oct 24 03:40 input.tar.gz
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user 226877137 Oct 24 03:40 EVNT.46771634._004227.pool.root.1
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 24 03:40 start_atlas.sh
[2025-10-24 04:33:14] drwxrwx--x 2 mf493845 unix-user       100 Oct 24 03:40 shared
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      6393 Oct 24 03:40 init_data.xml
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user         0 Oct 24 03:40 boinc_setup_complete
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      8192 Oct 24 03:40 boinc_mmap_file
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user         0 Oct 24 03:40 boinc_lockfile
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      2562 Oct 24 03:40 pandaJob.out
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    978558 Oct 24 03:40 agis_schedconf.cvmfs.json
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user   1560740 Oct 24 03:40 agis_ddmendpoints.agis.ALL.json
[2025-10-24 04:33:14] drwx------ 5 mf493845 unix-user       440 Oct 24 03:40 pilot3
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user 212995964 Oct 24 04:32 HITS.46771637._106731.pool.root.1
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      1013 Oct 24 04:32 memory_monitor_summary.json
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user        95 Oct 24 04:32 pilot_heartbeat.json
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    310488 Oct 24 04:32 log.46771637._106731.job.log.tgz.1
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      7774 Oct 24 04:32 heartbeat.json
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       890 Oct 24 04:33 pilotlog.txt
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    489607 Oct 24 04:33 log.46771637._106731.job.log.1
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       357 Oct 24 04:33 output.list
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       620 Oct 24 04:33 runtime_log
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    819200 Oct 24 04:33 result.tar.gz
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user      9076 Oct 24 04:33 runtime_log.err
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user       644 Oct 24 04:33 oo4NDmAPBW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmybjMDmjI8z2m.diag
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user     22237 Oct 24 04:33 stderr.txt
[2025-10-24 04:33:14] HITS file was successfully produced:
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user 212995964 Oct 24 04:32 shared/HITS.pool.root.1
[2025-10-24 04:33:14]  *** Contents of shared directory: ***
[2025-10-24 04:33:14] total 430940
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user    569693 Oct 24 03:40 input.tar.gz
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user 226877137 Oct 24 03:40 ATLAS.root_0
[2025-10-24 04:33:14] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 24 03:40 start_atlas.sh
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user 212995964 Oct 24 04:32 HITS.pool.root.1
[2025-10-24 04:33:14] -rw------- 1 mf493845 unix-user    819200 Oct 24 04:33 result.tar.gz
04:33:16 (14567): run_atlas exited; CPU time 22446.407251
04:33:16 (14567): called boinc_finish(0)

</stderr_txt>
]]>

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