Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-23 14:18:01 (6020): vboxwrapper version 26210
2025-10-23 14:18:01 (6020): BOINC client version: 8.0.2
2025-10-23 14:18:02 (6020): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-23 14:18:03 (6020): Successfully copied 'init_data.xml' to the shared directory.
2025-10-23 14:18:03 (6020): Create VM. (boinc_1f5ebbc71d1dca18, slot#7)
2025-10-23 14:18:03 (6020): Setting Memory Size for VM. (4600MB)
2025-10-23 14:18:04 (6020): Setting CPU Count for VM. (6)
2025-10-23 14:18:04 (6020): Setting Chipset Options for VM.
2025-10-23 14:18:04 (6020): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-23 14:18:05 (6020): Setting Boot Options for VM.
2025-10-23 14:18:14 (6020): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-23 14:18:15 (6020): Enabling VM Network Access.
2025-10-23 14:18:15 (6020): Disabling USB Support for VM.
2025-10-23 14:18:15 (6020): Disabling COM Port Support for VM.
2025-10-23 14:18:15 (6020): Disabling LPT Port Support for VM.
2025-10-23 14:18:16 (6020): Disabling Audio Support for VM.
2025-10-23 14:18:16 (6020): Disabling Clipboard Support for VM.
2025-10-23 14:18:16 (6020): Disabling Drag and Drop Support for VM.
2025-10-23 14:18:17 (6020): Adding storage controller(s) to VM.
2025-10-23 14:18:17 (6020): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-23 14:18:17 (6020): Adding VirtualBox Guest Additions to VM.
2025-10-23 14:18:18 (6020): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-23 14:18:18 (6020): forwarding host port 12570 to guest port 80
2025-10-23 14:18:18 (6020): Enabling remote desktop for VM.
2025-10-23 14:18:19 (6020): Required extension pack not installed, remote desktop not enabled.
2025-10-23 14:18:19 (6020): Enabling shared directory for VM.
2025-10-23 14:18:19 (6020): Starting VM using VBoxManage interface. (boinc_1f5ebbc71d1dca18, slot#7)
2025-10-23 14:18:29 (6020): Successfully started VM. (PID = '12848')
2025-10-23 14:18:29 (6020): Reporting VM Process ID to BOINC.
2025-10-23 14:18:29 (6020): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-23 14:18:29 (6020): Guest Log: CPUID EDX: 0x178bfbff
2025-10-23 14:18:29 (6020): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-23 14:18:29 (6020): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-23 14:18:29 (6020): Detected: Web Application Enabled (http://localhost:12570)
2025-10-23 14:18:29 (6020): Preference change detected
2025-10-23 14:18:29 (6020): Setting CPU throttle for VM. (100%)
2025-10-23 14:18:29 (6020): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-23 14:18:31 (6020): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-23 14:18:31 (6020): Guest Log: BIOS: Booting from Hard Disk...
2025-10-23 14:18:35 (6020): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-23 14:18:35 (6020): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-23 14:18:35 (6020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-23 14:18:45 (6020): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-23 14:18:45 (6020): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-23 14:19:01 (6020): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000354 main     Log opened 2025-10-23T14:18:58.797672000Z
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000693 main     OS Product: Linux
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000785 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000870 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000955 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000958 main     Process ID: 1341
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.000959 main     Package type: LINUX_64BITS_GENERIC
2025-10-23 14:19:01 (6020): Guest Log: 00:00:00.002805 main     5.2.32 r132073 started. Verbose level = 0
2025-10-23 14:19:01 (6020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-23 14:19:01 (6020): Guest Log: [INFO] Mounting shared directory
2025-10-23 14:19:01 (6020): Guest Log: [INFO] Checking for init_data.xml
2025-10-23 14:19:09 (6020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-23 14:19:09 (6020): Guest Log: [INFO] Detected branch: prod
2025-10-23 14:19:09 (6020): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-23 14:19:09 (6020): Guest Log: Copying input files
2025-10-23 14:19:11 (6020): Guest Log: 00:00:10.006893 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 649 749 000ns (GuestNow=1 761 254 350 452 945 000 ns GuestLast=1 761 229 138 803 196 000 ns fSetTimeLastLoop=true )
2025-10-23 14:19:13 (6020): Guest Log: Copied input files into RunAtlas.
2025-10-23 14:19:13 (6020): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-23 14:19:13 (6020): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-23 14:19:13 (6020): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-23 14:19:13 (6020): Guest Log: Further information can be found at the LHC@home message board.
2025-10-23 14:19:25 (6020): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-23 14:19:25 (6020): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-23 14:19:25 (6020): Guest Log: 2.6.3.0 1642 0 32220 152050 4 1 3117639 4096000 0 65024 0 0 n/a 1 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-23 14:19:27 (6020): Guest Log: copied the webapp to /var/www
2025-10-23 14:19:27 (6020): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-23 14:19:27 (6020): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-23 14:19:27 (6020): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-23 14:19:27 (6020): Guest Log:  *** Starting ATLAS job. (PandaID=6854791561 taskID=46771637) ***
2025-10-23 15:58:38 (6020): Status Report: Elapsed Time: '6000.000000'
2025-10-23 15:58:38 (6020): Status Report: CPU Time: '25894.890625'
2025-10-23 17:38:48 (6020): Status Report: Elapsed Time: '12000.000000'
2025-10-23 17:38:48 (6020): Status Report: CPU Time: '60474.187500'
2025-10-23 19:18:59 (6020): Status Report: Elapsed Time: '18000.000000'
2025-10-23 19:18:59 (6020): Status Report: CPU Time: '94923.562500'
2025-10-23 20:59:21 (6020): Status Report: Elapsed Time: '24000.000000'
2025-10-23 20:59:21 (6020): Status Report: CPU Time: '122762.500000'
2025-10-23 22:39:49 (6020): Status Report: Elapsed Time: '30000.000000'
2025-10-23 22:39:49 (6020): Status Report: CPU Time: '147342.656250'
2025-10-24 00:20:17 (6020): Status Report: Elapsed Time: '36000.000000'
2025-10-24 00:20:17 (6020): Status Report: CPU Time: '170039.562500'
2025-10-24 02:00:43 (6020): Status Report: Elapsed Time: '42000.000000'
2025-10-24 02:00:43 (6020): Status Report: CPU Time: '192724.671875'
2025-10-24 02:27:18 (6020): Guest Log:  *** Job finished ***
2025-10-24 02:27:18 (6020): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:06,188 | INFO     | all workflow threads have been joined
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:06,188 | INFO     | end of generic workflow (traces error code: 0)
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:06,189 | INFO     | traces error code: 0
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:06,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,731 | INFO     | PID=6075 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,734 | INFO     | found 0 job(s) in 20 queues
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:16,735 | INFO     | [monitor] control thread has ended
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,005 [wrapper] ==== pilot stdout END ====
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,030 [wrapper] ==== wrapper stdout RESUME ====
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,053 [wrapper] pilotpid: 6075
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,079 [wrapper] Pilot exit status: 0
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,220 [wrapper] pandaids: 6854791561
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,418 [wrapper] cleanup supervisor_pilot 24500 6076
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,457 [wrapper] Test setup, not cleaning
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,482 [wrapper] apfmon messages muted
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,504 [wrapper] ==== wrapper stdout END ====
2025-10-24 02:27:18 (6020): Guest Log: 2025-10-24 09:27:17,523 [wrapper] ==== wrapper stderr END ====
2025-10-24 02:27:18 (6020): Guest Log:  *** Error codes and diagnostics ***
2025-10-24 02:27:18 (6020): Guest Log:     "exeErrorCode": 0,
2025-10-24 02:27:18 (6020): Guest Log:     "exeErrorDiag": "",
2025-10-24 02:27:18 (6020): Guest Log:     "pilotErrorCode": 0,
2025-10-24 02:27:18 (6020): Guest Log:     "pilotErrorDiag": "",
2025-10-24 02:27:18 (6020): Guest Log:  *** Listing of results directory ***
2025-10-24 02:27:18 (6020): Guest Log: total 215632
2025-10-24 02:27:18 (6020): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 23 15:22 pilot3.tar.gz
2025-10-24 02:27:18 (6020): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 23 15:57 runpilot2-wrapper.sh
2025-10-24 02:27:18 (6020): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 23 15:57 queuedata.json
2025-10-24 02:27:18 (6020): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Oct 23 21:19 init_data.xml
2025-10-24 02:27:18 (6020): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 23 21:19 input.tar.gz
2025-10-24 02:27:18 (6020): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 23 21:19 start_atlas.sh
2025-10-24 02:27:18 (6020): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 23 21:19 EVNT.46771634._004274.pool.root.1 -> /data/./ATLAS.root_0
2025-10-24 02:27:18 (6020): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Oct 23 21:19 pandaJob.out
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas    978508 Oct 23 21:22 agis_schedconf.cvmfs.json
2025-10-24 02:27:18 (6020): Guest Log: drwx------. 5 atlas atlas      4096 Oct 23 21:23 pilot3
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas 204521964 Oct 24 09:24 HITS.46771637._107887.pool.root.1
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 24 09:25 memory_monitor_summary.json
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 24 09:25 agis_ddmendpoints.agis.ALL.json
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas    795014 Oct 24 09:25 log.46771637._107887.job.log.tgz.1
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas      7836 Oct 24 09:26 heartbeat.json
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas        95 Oct 24 09:27 pilot_heartbeat.json
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas       744 Oct 24 09:27 pilotlog.txt
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas   5428437 Oct 24 09:27 log.46771637._107887.job.log.1
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas       357 Oct 24 09:27 output.list
2025-10-24 02:27:18 (6020): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 24 09:27 runtime_log
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas   6246400 Oct 24 09:27 result.tar.gz
2025-10-24 02:27:18 (6020): Guest Log: -rw-r--r--. 1 atlas atlas      8667 Oct 24 09:27 runtime_log.err
2025-10-24 02:27:18 (6020): Guest Log: -rw-------. 1 atlas atlas       671 Oct 24 09:27 aarKDmTsCW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV98NDmBmfQUm.diag
2025-10-24 02:27:19 (6020): Guest Log: Looking for outputfile HITS.46771637._107887.pool.root.1
2025-10-24 02:27:19 (6020): Guest Log: HITS file was successfully produced
2025-10-24 02:27:19 (6020): Guest Log: -rw-------. 1 atlas atlas 204521964 Oct 24 09:24 /home/atlas/RunAtlas/HITS.46771637._107887.pool.root.1
2025-10-24 02:27:23 (6020): Guest Log: Successfully finished the ATLAS job!
2025-10-24 02:27:23 (6020): Guest Log: Copying the results back to the shared directory!
2025-10-24 02:27:23 (6020): Guest Log:  *** Contents of shared directory: ***
2025-10-24 02:27:23 (6020): Guest Log: total 428560
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root 227469910 Oct 23 21:18 ATLAS.root_0
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root 204521964 Oct 24 09:27 HITS.pool.root.1
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root      9204 Oct 23 21:18 init_data.xml
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 23 21:17 input.tar.gz
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root   6246400 Oct 24 09:27 result.tar.gz
2025-10-24 02:27:23 (6020): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 23 21:17 start_atlas.sh
2025-10-24 02:27:23 (6020): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-24 02:27:23 (6020): VM Completion File Detected.
2025-10-24 02:27:23 (6020): Powering off VM.
2025-10-24 02:27:26 (6020): Successfully stopped VM.
2025-10-24 02:27:26 (6020): Deregistering VM. (boinc_1f5ebbc71d1dca18, slot#7)
2025-10-24 02:27:26 (6020): Removing network bandwidth throttle group from VM.
2025-10-24 02:27:26 (6020): Removing VM from VirtualBox.
2025-10-24 02:27:32 (6020): called boinc_finish(0)

</stderr_txt>
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