Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:54 (2278668): wrapper (7.7.26015): starting
17:21:54 (2278668): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 17:21:54] Arguments: --nthreads 8
[2025-10-23 17:21:54] Threads: 8
[2025-10-23 17:21:54] Checking for CVMFS
[2025-10-23 17:21:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 17:21:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 17:21:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 17:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 17:21:55] 2.13.2.0 129819 3012 70420 152050 0 57 4942881 39288832 3664 16776704 0 9623662 99.929 759010 17037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 17:21:55] CVMFS is ok
[2025-10-23 17:21:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 17:21:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 17:21:55] Further information can be found at the LHC@home message board.
[2025-10-23 17:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 17:21:55] Checking for apptainer binary...
[2025-10-23 17:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 17:21:55] Running /usr/bin/apptainer --version
[2025-10-23 17:21:55] apptainer version 1.4.3-1.el9
[2025-10-23 17:21:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 17:21:55] c-210-16.aglt2.org
[2025-10-23 17:21:55] apptainer works
[2025-10-23 17:21:55] Set ATHENA_PROC_NUMBER=8
[2025-10-23 17:21:55] Set ATHENA_CORE_NUMBER=8
[2025-10-23 17:21:55] Starting ATLAS job with PandaID=6853022042
[2025-10-23 17:21:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 19:15:22]  *** The last 200 lines of the pilot log: ***
[2025-10-23 19:15:22] 2025-10-23 23:14:34,221 | INFO     | fitting pss+swap vs Time
[2025-10-23 19:15:22] 2025-10-23 23:14:34,221 | INFO     | sum of square deviations: 424045160.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,222 | INFO     | sum of deviations: -10566533947.999998
[2025-10-23 19:15:22] 2025-10-23 23:14:34,222 | INFO     | mean x: 1761257905.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,222 | INFO     | mean y: 2524473.189189189
[2025-10-23 19:15:22] 2025-10-23 23:14:34,222 | INFO     | -- intersect: 43890282664.7126
[2025-10-23 19:15:22] 2025-10-23 23:14:34,222 | INFO     | intersect: 43890282664.7126
[2025-10-23 19:15:22] 2025-10-23 23:14:34,223 | INFO     | chi2: 2.3229695140022306
[2025-10-23 19:15:22] 2025-10-23 23:14:34,223 | INFO     | sum of square deviations: 369281342.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | sum of deviations: -2584001174.9999986
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | mean x: 1761257752.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | mean y: 2545944.4716981133
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | -- intersect: 12326732352.394154
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | intersect: 12326732352.394154
[2025-10-23 19:15:22] 2025-10-23 23:14:34,224 | INFO     | chi2: 1.5314085695904993
[2025-10-23 19:15:22] 2025-10-23 23:14:34,225 | INFO     | current chi2=1.5314085695904993 (change=34.075390987286596 %)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,225 | INFO     | sum of square deviations: 319447850.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,225 | INFO     | sum of deviations: -2231605700.000002
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | mean x: 1761257600.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | mean y: 2547024.712871287
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | -- intersect: 12306378461.76378
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | intersect: 12306378461.76378
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | chi2: 1.5314305409785163
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | current chi2=1.5314305409785163 (change=-0.0014347175830964948 %)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,226 | INFO     | right removable region: 100
[2025-10-23 19:15:22] 2025-10-23 23:14:34,227 | INFO     | sum of square deviations: 369281342.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,227 | INFO     | sum of deviations: -24678173511.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,227 | INFO     | mean x: 1761258057.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,227 | INFO     | mean y: 2562779.9905660376
[2025-10-23 19:15:22] 2025-10-23 23:14:34,228 | INFO     | -- intersect: 117703152924.24472
[2025-10-23 19:15:22] 2025-10-23 23:14:34,228 | INFO     | intersect: 117703152924.24472
[2025-10-23 19:15:22] 2025-10-23 23:14:34,228 | INFO     | chi2: 1.0251327250763953
[2025-10-23 19:15:22] 2025-10-23 23:14:34,228 | INFO     | current chi2=1.0251327250763953 (change=55.86972971891482 %)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,228 | INFO     | sum of square deviations: 319447850.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,229 | INFO     | sum of deviations: -20883525253.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,229 | INFO     | mean x: 1761258210.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,229 | INFO     | mean y: 2551028.574257426
[2025-10-23 19:15:22] 2025-10-23 23:14:34,229 | INFO     | -- intersect: 115142722751.71649
[2025-10-23 19:15:22] 2025-10-23 23:14:34,229 | INFO     | intersect: 115142722751.71649
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | chi2: 1.0118250978967822
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | current chi2=1.0118250978967822 (change=1.298136997686946 %)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | left removable region: 20
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | sum of square deviations: 158737860.0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | sum of deviations: -3232525023.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,230 | INFO     | mean x: 1761258179.5
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | mean y: 2538373.9625
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | -- intersect: 35868658391.44166
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | intersect: 35868658391.44166
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | chi2: 0.08202663522399507
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | -- intersect: 35868658391.44166
[2025-10-23 19:15:22] 2025-10-23 23:14:34,231 | INFO     | current memory leak: -20.36 B/s (using 80 data points, chi2=0.08)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | could have reported an average CPU frequency of 2605 MHz (7 samples)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | ..............................
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | . Timing measurements:
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | . get job = 0 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | . initial setup = 2 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | . payload setup = 5 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,232 | INFO     | . stage-in = 0 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,233 | INFO     | . payload execution = 6717 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,233 | INFO     | . stage-out = 0 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,233 | INFO     | . log creation = 0 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,233 | INFO     | ..............................
[2025-10-23 19:15:22] 2025-10-23 23:14:34,336 | INFO     | 
[2025-10-23 19:15:22] 2025-10-23 23:14:34,336 | INFO     | job summary report
[2025-10-23 19:15:22] 2025-10-23 23:14:34,336 | INFO     | --------------------------------------------------
[2025-10-23 19:15:22] 2025-10-23 23:14:34,336 | INFO     | PanDA job id: 6853022042
[2025-10-23 19:15:22] 2025-10-23 23:14:34,336 | INFO     | task id: 46771637
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | errors: (none)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | pilot state: finished 
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | transexitcode: 0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | exeerrorcode: 0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | exeerrordiag: 
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | exitcode: 0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | exitmsg: OK
[2025-10-23 19:15:22] 2025-10-23 23:14:34,337 | INFO     | cpuconsumptiontime: 49887 s
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | nevents: 400
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | neventsw: 0
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | pid: 2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | pgrp: 2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | corecount: 8
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | event service: False
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | sizes: {0: 2348931, 4: 2349193, 11: 2349221, 6726: 2376417, 6727: 2385415, 6729: 2385471, 6733: 2385793}
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | --------------------------------------------------
[2025-10-23 19:15:22] 2025-10-23 23:14:34,338 | INFO     | 
[2025-10-23 19:15:22] 2025-10-23 23:14:34,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 19:15:22] 2025-10-23 23:14:34,359 | INFO     | job 6853022042 has completed (purged errors)
[2025-10-23 19:15:22] 2025-10-23 23:14:34,360 | INFO     | overall cleanup function is called
[2025-10-23 19:15:22] 2025-10-23 23:14:35,366 | INFO     | --- collectZombieJob: --- 10, [2288934]
[2025-10-23 19:15:22] 2025-10-23 23:14:35,367 | INFO     | zombie collector waiting for pid 2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:35,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 19:15:22] 2025-10-23 23:14:35,367 | INFO     | collected zombie processes
[2025-10-23 19:15:22] 2025-10-23 23:14:35,367 | INFO     | will attempt to kill all subprocesses of pid=2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:35,596 | INFO     | process IDs to be killed: [2288934] (in reverse order)
[2025-10-23 19:15:22] 2025-10-23 23:14:35,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 19:15:22] 2025-10-23 23:14:35,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 19:15:22] 2025-10-23 23:14:35,664 | INFO     | did not find any defunct processes belonging to 2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:35,669 | INFO     | did not find any defunct processes belonging to 2288934
[2025-10-23 19:15:22] 2025-10-23 23:14:35,669 | INFO     | ready for new job
[2025-10-23 19:15:22] 2025-10-23 23:14:35,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 19:15:22] 2025-10-23 23:14:35,671 | INFO     | ***************************************
[2025-10-23 19:15:22] 2025-10-23 23:14:35,671 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 19:15:22] 2025-10-23 23:14:35,671 | INFO     | ***************************************
[2025-10-23 19:15:22] 2025-10-23 23:14:35,672 | INFO     | 
[2025-10-23 19:15:22] 2025-10-23 23:14:35,673 | INFO     | architecture information:
[2025-10-23 19:15:22] 2025-10-23 23:14:35,674 | INFO     | executing command: cat /etc/os-release
[2025-10-23 19:15:22] 2025-10-23 23:14:35,687 | INFO     | cat /etc/os-release:
[2025-10-23 19:15:22] NAME="CentOS Linux"
[2025-10-23 19:15:22] VERSION="7 (Core)"
[2025-10-23 19:15:22] ID="centos"
[2025-10-23 19:15:22] ID_LIKE="rhel fedora"
[2025-10-23 19:15:22] VERSION_ID="7"
[2025-10-23 19:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 19:15:22] ANSI_COLOR="0;31"
[2025-10-23 19:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 19:15:22] HOME_URL="https://www.centos.org/"
[2025-10-23 19:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 19:15:22] 
[2025-10-23 19:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 19:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 19:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 19:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 19:15:22] 
[2025-10-23 19:15:22] 2025-10-23 23:14:35,687 | INFO     | ***************************************
[2025-10-23 19:15:22] 2025-10-23 23:14:36,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-23 19:15:22] 2025-10-23 23:14:36,204 | INFO     | sufficient remaining disk space (51387564032 B)
[2025-10-23 19:15:22] 2025-10-23 23:14:36,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 19:15:22] 2025-10-23 23:14:36,204 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 19:15:22] 2025-10-23 23:14:36,205 | INFO     | update_server=False
[2025-10-23 19:15:22] 2025-10-23 23:14:36,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 19:15:22] 2025-10-23 23:14:36,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 19:15:22] 2025-10-23 23:14:36,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 19:15:22] 2025-10-23 23:14:36,362 | INFO     | all data control threads have been joined
[2025-10-23 19:15:22] 2025-10-23 23:14:36,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 19:15:22] 2025-10-23 23:14:36,661 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-23 19:15:22] 2025-10-23 23:14:36,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-23 19:15:22] 2025-10-23 23:14:36,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 19:15:22] 2025-10-23 23:14:36,662 | INFO     | will abort loop
[2025-10-23 19:15:22] 2025-10-23 23:14:37,038 | INFO     | all payload control threads have been joined
[2025-10-23 19:15:22] 2025-10-23 23:14:37,210 | INFO     | [job] retrieve thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,210 | INFO     | [job] queue monitor thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,347 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,367 | INFO     | [data] control thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,454 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,601 | INFO     | all job control threads have been joined
[2025-10-23 19:15:22] 2025-10-23 23:14:37,616 | INFO     | [payload] validate_post thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:37,667 | INFO     | [job] job monitor thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,003 | INFO     | [data] copytool_in thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,042 | INFO     | [payload] control thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,370 | INFO     | [job] validate thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,417 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,509 | INFO     | [data] copytool_out thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,554 | INFO     | [payload] failed_post thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:38,607 | INFO     | [job] control thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:40,344 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:14:47,057 | INFO     | job.realtimelogging is not enabled
[2025-10-23 19:15:22] 2025-10-23 23:14:48,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 19:15:22] 2025-10-23 23:15:07,216 | INFO     | PID=2282339 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 19:15:22] 2025-10-23 23:15:07,217 | INFO     | .. there are 5 such processes running
[2025-10-23 19:15:22] 2025-10-23 23:15:07,217 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 19:15:22] 2025-10-23 23:15:07,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 19:15:22] 2025-10-23 23:15:07,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 19:15:22] 2025-10-23 23:15:16,298 | INFO     | [monitor] cgroup control has ended
[2025-10-23 19:15:22] 2025-10-23 23:15:16,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813783877440)>', '<ExcThread(monitor, started 139813290223360)>']
[2025-10-23 19:15:22] 2025-10-23 23:15:17,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 19:15:22] 2025-10-23 23:15:17,268 | INFO     | [monitor] control thread has ended
[2025-10-23 19:15:22] 2025-10-23 23:15:21,844 | INFO     | all workflow threads have been joined
[2025-10-23 19:15:22] 2025-10-23 23:15:21,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 19:15:22] 2025-10-23 23:15:21,845 | INFO     | traces error code: 0
[2025-10-23 19:15:22] 2025-10-23 23:15:21,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 19:15:22] 2025-10-23 23:15:21,946 [wrapper] ==== pilot stdout END ====
[2025-10-23 19:15:22] 2025-10-23 23:15:21,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 19:15:22] 2025-10-23 23:15:21,950 [wrapper] pilotpid: 2282339
[2025-10-23 19:15:22] 2025-10-23 23:15:21,953 [wrapper] Pilot exit status: 0
[2025-10-23 19:15:22] 2025-10-23 23:15:21,962 [wrapper] pandaids: 6853022042
[2025-10-23 19:15:22] 2025-10-23 23:15:22,004 [wrapper] cleanup supervisor_pilot 2488595 2282340
[2025-10-23 19:15:22] 2025-10-23 23:15:22,006 [wrapper] Test setup, not cleaning
[2025-10-23 19:15:22] 2025-10-23 23:15:22,009 [wrapper] apfmon messages muted
[2025-10-23 19:15:22] 2025-10-23 23:15:22,011 [wrapper] ==== wrapper stdout END ====
[2025-10-23 19:15:22] 2025-10-23 23:15:22,013 [wrapper] ==== wrapper stderr END ====
[2025-10-23 19:15:22]  *** Error codes and diagnostics ***
[2025-10-23 19:15:22]     "exeErrorCode": 0,
[2025-10-23 19:15:22]     "exeErrorDiag": "",
[2025-10-23 19:15:22]     "pilotErrorCode": 0,
[2025-10-23 19:15:22]     "pilotErrorDiag": "",
[2025-10-23 19:15:22]  *** Listing of results directory ***
[2025-10-23 19:15:22] total 437760
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 05:00 pilot3.tar.gz
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 05:33 queuedata.json
[2025-10-23 19:15:22] -rwx------. 1 boincer umatlas     36292 Oct 21 05:35 runpilot2-wrapper.sh
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas       100 Oct 23 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 19:15:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 17:21 run_atlas
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas       105 Oct 23 17:21 job.xml
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas 229487838 Oct 23 17:21 EVNT.46771634._002571.pool.root.1
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 17:21 start_atlas.sh
[2025-10-23 19:15:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 17:21 shared
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas    569681 Oct 23 17:21 input.tar.gz
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas         0 Oct 23 17:21 boinc_lockfile
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas      2560 Oct 23 17:21 pandaJob.out
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas    978508 Oct 23 17:22 agis_schedconf.cvmfs.json
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas   1560740 Oct 23 17:22 agis_ddmendpoints.agis.ALL.json
[2025-10-23 19:15:22] drwx------. 5 boincer umatlas      4096 Oct 23 17:22 pilot3
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas      6659 Oct 23 19:13 init_data.xml
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas       529 Oct 23 19:13 boinc_task_state.xml
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas 212187581 Oct 23 19:13 HITS.46771637._065081.pool.root.1
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas        95 Oct 23 19:14 pilot_heartbeat.json
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas      1034 Oct 23 19:14 memory_monitor_summary.json
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas    365668 Oct 23 19:14 log.46771637._065081.job.log.tgz.1
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas      7818 Oct 23 19:14 heartbeat.json
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas        27 Oct 23 19:15 wrapper_checkpoint.txt
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 19:15 boinc_mmap_file
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas      5081 Oct 23 19:15 pilotlog.txt
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas    977618 Oct 23 19:15 log.46771637._065081.job.log.1
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas       357 Oct 23 19:15 output.list
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas       620 Oct 23 19:15 runtime_log
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas   1361920 Oct 23 19:15 result.tar.gz
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas       652 Oct 23 19:15 s86MDm1wNV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyHfMDm8Twgkm.diag
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas      8703 Oct 23 19:15 runtime_log.err
[2025-10-23 19:15:22] -rw-r--r--. 1 boincer umatlas     20890 Oct 23 19:15 stderr.txt
[2025-10-23 19:15:22] HITS file was successfully produced:
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas 212187581 Oct 23 19:13 shared/HITS.pool.root.1
[2025-10-23 19:15:22]  *** Contents of shared directory: ***
[2025-10-23 19:15:22] total 433240
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas 229487838 Oct 23 17:21 ATLAS.root_0
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 17:21 start_atlas.sh
[2025-10-23 19:15:22] -rw-r--r--. 2 boincer umatlas    569681 Oct 23 17:21 input.tar.gz
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas 212187581 Oct 23 19:13 HITS.pool.root.1
[2025-10-23 19:15:22] -rw-------. 1 boincer umatlas   1361920 Oct 23 19:15 result.tar.gz
19:15:23 (2278668): run_atlas exited; CPU time 50025.586080
19:15:23 (2278668): called boinc_finish(0)

</stderr_txt>
]]>

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