Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:52 (540558): wrapper (7.7.26015): starting
08:52:52 (540558): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 08:52:52] Arguments: --nthreads 4
[2025-10-24 08:52:52] Threads: 4
[2025-10-24 08:52:52] Checking for CVMFS
[2025-10-24 08:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 08:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 08:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 08:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 08:52:52] 2.9.2.0 3124 1669 85784 152065 0 57 30494233 36864001 0 130560 0 1378030 99.990 62748 998 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-24 08:52:52] CVMFS is ok
[2025-10-24 08:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 08:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 08:52:52] Further information can be found at the LHC@home message board.
[2025-10-24 08:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 08:52:52] Checking for apptainer binary...
[2025-10-24 08:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 08:52:52] Running /usr/bin/apptainer --version
[2025-10-24 08:52:52] apptainer version 1.4.1-1.1
[2025-10-24 08:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 08:52:52] belleA267b
[2025-10-24 08:52:52] apptainer works
[2025-10-24 08:52:52] Set ATHENA_PROC_NUMBER=4
[2025-10-24 08:52:52] Set ATHENA_CORE_NUMBER=4
[2025-10-24 08:52:52] Starting ATLAS job with PandaID=6854790257
[2025-10-24 08:52:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 10:08:23]  *** The last 200 lines of the pilot log: ***
[2025-10-24 10:08:23] ]
[2025-10-24 10:08:23] 2025-10-24 08:07:40,396 | INFO     | transferring file log.46771637._107062.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6854790257/log.46771637._107062.job.log.tgz.1 to /local/data/boinc/
[2025-10-24 10:08:23] 2025-10-24 08:07:40,396 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6854790257/log.46771637._107062.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._1070
[2025-10-24 10:08:23] 2025-10-24 08:07:40,415 | INFO     | adding to output.list: log.46771637._107062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e8/log.46771637._107062.job.log.tg
[2025-10-24 10:08:23] 2025-10-24 08:07:40,415 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 10:08:23] 2025-10-24 08:07:40,415 | INFO     | summary of transferred files:
[2025-10-24 10:08:23] 2025-10-24 08:07:40,415 | INFO     |  -- lfn=log.46771637._107062.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 10:08:23] 2025-10-24 08:07:40,416 | INFO     | stage-out finished correctly
[2025-10-24 10:08:23] 2025-10-24 08:07:40,423 | INFO     | time since job start (4480s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:42,126 | WARNING  | process 550910 can no longer be monitored (due to stat problems) - aborting
[2025-10-24 10:08:23] 2025-10-24 08:07:42,126 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6854790257/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 10:08:23] 2025-10-24 08:07:42,165 | INFO     | number of running child processes to parent process 550910: 1
[2025-10-24 10:08:23] 2025-10-24 08:07:42,165 | INFO     | maximum number of monitored processes: 6
[2025-10-24 10:08:23] 2025-10-24 08:07:42,429 | INFO     | time since job start (4482s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:43,186 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 10:08:23] 2025-10-24 08:07:44,435 | INFO     | time since job start (4484s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:44,668 | INFO     | monitor loop #345: job 0:6854790257 is in state 'finished'
[2025-10-24 10:08:23] 2025-10-24 08:07:44,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | job 6854790257 has state=finished
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | preparing for final server update for job 6854790257 in state='finished'
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | this job has now completed (state=finished)
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | log transfer has been attempted: DONE
[2025-10-24 10:08:23] 2025-10-24 08:07:44,957 | INFO     | job 6854790257 has finished - writing final server update
[2025-10-24 10:08:23] 2025-10-24 08:07:44,958 | INFO     | total number of processed events: 400 (read)
[2025-10-24 10:08:23] 2025-10-24 08:07:44,958 | INFO     | executing command: lscpu
[2025-10-24 10:08:23] 2025-10-24 08:07:44,979 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 10:08:23] 2025-10-24 08:07:46,441 | INFO     | time since job start (4486s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:47,171 | INFO     | monitor loop #346: job 0:6854790257 is in state 'finished'
[2025-10-24 10:08:23] 2025-10-24 08:07:47,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 10:08:23] 2025-10-24 08:07:48,447 | INFO     | time since job start (4488s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:49,510 | INFO     | PID=544347 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 10:08:23] 2025-10-24 08:07:49,675 | INFO     | monitor loop #347: job 0:6854790257 is in state 'finished'
[2025-10-24 10:08:23] 2025-10-24 08:07:49,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,510 | INFO     | time since job start (4490s) is within the limit (172800.0s)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,846 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 10:08:23] 2025-10-24 08:07:50,848 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3462.7128125000004
[2025-10-24 10:08:23] 2025-10-24 08:07:50,849 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6854790257/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,849 | INFO     | extracted standard info from prmon json
[2025-10-24 10:08:23] 2025-10-24 08:07:50,849 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 10:08:23] 2025-10-24 08:07:50,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 10:08:23] 2025-10-24 08:07:50,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 10:08:23] 2025-10-24 08:07:50,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 10:08:23] 2025-10-24 08:07:50,850 | INFO     | fitting pss+swap vs Time
[2025-10-24 10:08:23] 2025-10-24 08:07:50,850 | INFO     | sum of square deviations: 93240818.0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | sum of deviations: -6879627580.0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | mean x: 1761291121.0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | mean y: 2468162.537313433
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | -- intersect: 129956572302.21481
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | intersect: 129956572302.21481
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | chi2: 0.0929024307355922
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | -- intersect: 129956572302.21481
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | current memory leak: -73.78 B/s (using 67 data points, chi2=0.09)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | could have reported an average CPU frequency of 3751 MHz (6 samples)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | ..............................
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . Timing measurements:
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . get job = 0 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . initial setup = 1 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . payload setup = 4 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . stage-in = 0 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . payload execution = 4457 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . stage-out = 0 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | . log creation = 0 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,851 | INFO     | ..............................
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | 
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | job summary report
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | --------------------------------------------------
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | PanDA job id: 6854790257
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | task id: 46771637
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | errors: (none)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | pilot state: finished 
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | transexitcode: 0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | exeerrorcode: 0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | exeerrordiag: 
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | exitcode: 0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | exitmsg: OK
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | cpuconsumptiontime: 16939 s
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | nevents: 400
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | neventsw: 0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | pid: 550910
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | pgrp: 550910
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | corecount: 4
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | event service: False
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | sizes: {0: 2348765, 1: 2348964, 4: 2349226, 11: 2349254, 4465: 2384534, 4468: 2384534, 4476: 2384856}
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | --------------------------------------------------
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | 
[2025-10-24 10:08:23] 2025-10-24 08:07:50,892 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | job 6854790257 has completed (purged errors)
[2025-10-24 10:08:23] 2025-10-24 08:07:50,911 | INFO     | overall cleanup function is called
[2025-10-24 10:08:23] 2025-10-24 08:07:51,918 | INFO     | --- collectZombieJob: --- 10, [550910]
[2025-10-24 10:08:23] 2025-10-24 08:07:51,918 | INFO     | zombie collector waiting for pid 550910
[2025-10-24 10:08:23] 2025-10-24 08:07:51,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 10:08:23] 2025-10-24 08:07:51,918 | INFO     | collected zombie processes
[2025-10-24 10:08:23] 2025-10-24 08:07:51,918 | INFO     | will attempt to kill all subprocesses of pid=550910
[2025-10-24 10:08:23] 2025-10-24 08:07:51,962 | INFO     | process IDs to be killed: [550910] (in reverse order)
[2025-10-24 10:08:23] 2025-10-24 08:07:51,995 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 10:08:23] 2025-10-24 08:07:51,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 10:08:23] 2025-10-24 08:07:51,997 | INFO     | did not find any defunct processes belonging to 550910
[2025-10-24 10:08:23] 2025-10-24 08:07:51,998 | INFO     | did not find any defunct processes belonging to 550910
[2025-10-24 10:08:23] 2025-10-24 08:07:51,998 | INFO     | ready for new job
[2025-10-24 10:08:23] 2025-10-24 08:07:51,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 10:08:23] 2025-10-24 08:07:51,999 | INFO     | ***************************************
[2025-10-24 10:08:23] 2025-10-24 08:07:51,999 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 10:08:23] 2025-10-24 08:07:51,999 | INFO     | ***************************************
[2025-10-24 10:08:23] 2025-10-24 08:07:51,999 | INFO     | 
[2025-10-24 10:08:23] 2025-10-24 08:07:52,000 | INFO     | architecture information:
[2025-10-24 10:08:23] 2025-10-24 08:07:52,000 | INFO     | executing command: cat /etc/os-release
[2025-10-24 10:08:23] 2025-10-24 08:07:52,014 | INFO     | cat /etc/os-release:
[2025-10-24 10:08:23] NAME="CentOS Linux"
[2025-10-24 10:08:23] VERSION="7 (Core)"
[2025-10-24 10:08:23] ID="centos"
[2025-10-24 10:08:23] ID_LIKE="rhel fedora"
[2025-10-24 10:08:23] VERSION_ID="7"
[2025-10-24 10:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 10:08:23] ANSI_COLOR="0;31"
[2025-10-24 10:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 10:08:23] HOME_URL="https://www.centos.org/"
[2025-10-24 10:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 10:08:23] 
[2025-10-24 10:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 10:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 10:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 10:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 10:08:23] 
[2025-10-24 10:08:23] 2025-10-24 08:07:52,014 | INFO     | ***************************************
[2025-10-24 10:08:23] 2025-10-24 08:07:52,517 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-24 10:08:23] 2025-10-24 08:07:52,535 | INFO     | sufficient remaining disk space (328985477120 B)
[2025-10-24 10:08:23] 2025-10-24 08:07:52,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 10:08:23] 2025-10-24 08:07:52,536 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 10:08:23] 2025-10-24 08:07:52,536 | INFO     | update_server=False
[2025-10-24 10:08:23] 2025-10-24 08:07:52,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 10:08:23] 2025-10-24 08:07:52,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 10:08:23] 2025-10-24 08:07:52,712 | INFO     | all payload control threads have been joined
[2025-10-24 10:08:23] 2025-10-24 08:07:52,730 | INFO     | all data control threads have been joined
[2025-10-24 10:08:23] 2025-10-24 08:07:53,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 10:08:23] 2025-10-24 08:07:53,184 | INFO     | aborting loop
[2025-10-24 10:08:23] 2025-10-24 08:07:53,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 10:08:23] 2025-10-24 08:07:53,541 | INFO     | [job] retrieve thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:53,542 | INFO     | [job] queue monitor thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:53,628 | INFO     | all job control threads have been joined
[2025-10-24 10:08:23] 2025-10-24 08:07:53,674 | INFO     | [data] copytool_in thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:53,718 | INFO     | [payload] control thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:53,736 | INFO     | [data] control thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:53,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 10:08:23] 2025-10-24 08:07:53,881 | INFO     | [payload] validate_post thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,190 | INFO     | [job] job monitor thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,545 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,593 | INFO     | [job] validate thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,618 | INFO     | [payload] failed_post thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,633 | INFO     | [job] control thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,847 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:54,899 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:55,482 | INFO     | [data] copytool_out thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:57,746 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:07:58,850 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-24 10:08:23] 2025-10-24 08:08:02,840 | INFO     | job.realtimelogging is not enabled
[2025-10-24 10:08:23] 2025-10-24 08:08:03,846 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 10:08:23] 2025-10-24 08:08:05,632 | INFO     | [monitor] cgroup control has ended
[2025-10-24 10:08:23] 2025-10-24 08:08:06,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056760018752)>', '<ExcThread(monitor, started 140055368681216)>']
[2025-10-24 10:08:23] 2025-10-24 08:08:11,534 | INFO     | all workflow threads have been joined
[2025-10-24 10:08:23] 2025-10-24 08:08:11,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 10:08:23] 2025-10-24 08:08:11,534 | INFO     | traces error code: 0
[2025-10-24 10:08:23] 2025-10-24 08:08:11,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 10:08:23] 2025-10-24 08:08:23,631 | INFO     | PID=544347 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 10:08:23] 2025-10-24 08:08:23,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 10:08:23] 2025-10-24 08:08:23,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 10:08:23] 2025-10-24 08:08:23,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 10:08:23] 2025-10-24 08:08:23,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 10:08:23] 2025-10-24 08:08:23,632 | INFO     | [monitor] control thread has ended
[2025-10-24 10:08:23] 2025-10-24 08:08:23,709 [wrapper] ==== pilot stdout END ====
[2025-10-24 10:08:23] 2025-10-24 08:08:23,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 10:08:23] 2025-10-24 08:08:23,717 [wrapper] pilotpid: 544347
[2025-10-24 10:08:23] 2025-10-24 08:08:23,721 [wrapper] Pilot exit status: 0
[2025-10-24 10:08:23] 2025-10-24 08:08:23,733 [wrapper] pandaids: 6854790257
[2025-10-24 10:08:23] 2025-10-24 08:08:23,755 [wrapper] cleanup supervisor_pilot  565587 544348
[2025-10-24 10:08:23] 2025-10-24 08:08:23,759 [wrapper] Test setup, not cleaning
[2025-10-24 10:08:23] 2025-10-24 08:08:23,763 [wrapper] apfmon messages muted
[2025-10-24 10:08:23] 2025-10-24 08:08:23,767 [wrapper] ==== wrapper stdout END ====
[2025-10-24 10:08:23] 2025-10-24 08:08:23,771 [wrapper] ==== wrapper stderr END ====
[2025-10-24 10:08:23]  *** Error codes and diagnostics ***
[2025-10-24 10:08:23]     "exeErrorCode": 0,
[2025-10-24 10:08:23]     "exeErrorDiag": "",
[2025-10-24 10:08:23]     "pilotErrorCode": 0,
[2025-10-24 10:08:23]     "pilotErrorDiag": "",
[2025-10-24 10:08:23]  *** Listing of results directory ***
[2025-10-24 10:08:23] total 425896
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc    557409 Oct 23 16:31 pilot3.tar.gz
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc      5112 Oct 23 16:52 queuedata.json
[2025-10-24 10:08:23] -rwx------ 1 boinc boinc     36292 Oct 23 16:55 runpilot2-wrapper.sh
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc       100 Oct 24 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 10:08:23] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 08:52 run_atlas
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc       105 Oct 24 08:52 job.xml
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc 226135831 Oct 24 08:52 EVNT.46771634._004240.pool.root.1
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc    569685 Oct 24 08:52 input.tar.gz
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc     15120 Oct 24 08:52 start_atlas.sh
[2025-10-24 10:08:23] drwxrwx--x 2 boinc boinc      4096 Oct 24 08:52 shared
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc         0 Oct 24 08:52 boinc_setup_complete
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc      6378 Oct 24 08:52 init_data.xml
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc         0 Oct 24 08:52 boinc_lockfile
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc      2561 Oct 24 08:52 pandaJob.out
[2025-10-24 10:08:23] -rw------- 1 boinc boinc    978566 Oct 24 08:52 agis_schedconf.cvmfs.json
[2025-10-24 10:08:23] -rw------- 1 boinc boinc   1560740 Oct 24 08:52 agis_ddmendpoints.agis.ALL.json
[2025-10-24 10:08:23] drwx------ 5 boinc boinc      4096 Oct 24 08:53 pilot3
[2025-10-24 10:08:23] -rw------- 1 boinc boinc 204252195 Oct 24 10:07 HITS.46771637._107062.pool.root.1
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc       529 Oct 24 10:07 boinc_task_state.xml
[2025-10-24 10:08:23] -rw------- 1 boinc boinc      1024 Oct 24 10:07 memory_monitor_summary.json
[2025-10-24 10:08:23] -rw------- 1 boinc boinc    248808 Oct 24 10:07 log.46771637._107062.job.log.tgz.1
[2025-10-24 10:08:23] -rw------- 1 boinc boinc      7777 Oct 24 10:07 heartbeat.json
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc        27 Oct 24 10:08 wrapper_checkpoint.txt
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc      8192 Oct 24 10:08 boinc_mmap_file
[2025-10-24 10:08:23] -rw------- 1 boinc boinc       746 Oct 24 10:08 pilotlog.txt
[2025-10-24 10:08:23] -rw------- 1 boinc boinc        95 Oct 24 10:08 pilot_heartbeat.json
[2025-10-24 10:08:23] -rw------- 1 boinc boinc    664616 Oct 24 10:08 log.46771637._107062.job.log.1
[2025-10-24 10:08:23] -rw------- 1 boinc boinc       357 Oct 24 10:08 output.list
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc       620 Oct 24 10:08 runtime_log
[2025-10-24 10:08:23] -rw------- 1 boinc boinc    931840 Oct 24 10:08 result.tar.gz
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc      8797 Oct 24 10:08 runtime_log.err
[2025-10-24 10:08:23] -rw------- 1 boinc boinc       662 Oct 24 10:08 RJaKDmptBW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDz8NDm4TUFhm.diag
[2025-10-24 10:08:23] -rw-r--r-- 1 boinc boinc     22418 Oct 24 10:08 stderr.txt
[2025-10-24 10:08:23] HITS file was successfully produced:
[2025-10-24 10:08:23] -rw------- 1 boinc boinc 204252195 Oct 24 10:07 shared/HITS.pool.root.1
[2025-10-24 10:08:23]  *** Contents of shared directory: ***
[2025-10-24 10:08:23] total 421800
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc 226135831 Oct 24 08:52 ATLAS.root_0
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc    569685 Oct 24 08:52 input.tar.gz
[2025-10-24 10:08:23] -rw-r--r-- 2 boinc boinc     15120 Oct 24 08:52 start_atlas.sh
[2025-10-24 10:08:23] -rw------- 1 boinc boinc 204252195 Oct 24 10:07 HITS.pool.root.1
[2025-10-24 10:08:23] -rw------- 1 boinc boinc    931840 Oct 24 10:08 result.tar.gz
10:08:24 (540558): run_atlas exited; CPU time 16948.876094
10:08:24 (540558): called boinc_finish(0)

</stderr_txt>
]]>

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