Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:00 (12575): wrapper (7.7.26015): starting
15:12:00 (12575): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 15:12:00] Arguments: --nthreads 8
[2025-10-23 15:12:00] Threads: 8
[2025-10-23 15:12:00] Checking for CVMFS
[2025-10-23 15:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 15:12:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 15:12:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 15:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 15:12:00] 2.11.2.0 3213 644062 246444 152046 3 188 12457364 20275200 917 130560 1 385644833 99.992 26621975 20409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 15:12:00] CVMFS is ok
[2025-10-23 15:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 15:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 15:12:00] Further information can be found at the LHC@home message board.
[2025-10-23 15:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 15:12:00] Checking for apptainer binary...
[2025-10-23 15:12:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 15:12:00] Running /usr/bin/apptainer --version
[2025-10-23 15:12:00] apptainer version 1.3.2-1.el7
[2025-10-23 15:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 15:12:01] c-205-38.aglt2.org
[2025-10-23 15:12:01] apptainer works
[2025-10-23 15:12:01] Set ATHENA_PROC_NUMBER=8
[2025-10-23 15:12:01] Set ATHENA_CORE_NUMBER=8
[2025-10-23 15:12:01] Starting ATLAS job with PandaID=6854481179
[2025-10-23 15:12:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 16:12:20]  *** The last 200 lines of the pilot log: ***
[2025-10-23 16:12:20]  scope=mc23_13p6TeV
[2025-10-23 16:12:20]  status=None
[2025-10-23 16:12:20]  status_code=0
[2025-10-23 16:12:20]  storage_token=
[2025-10-23 16:12:20]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6854481179/log.46771637._104243.job.log.tgz.1
[2025-10-23 16:12:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/5c/log.46771637._104243.job.log.tgz.1
[2025-10-23 16:12:20]  workdir=None
[2025-10-23 16:12:20] ]
[2025-10-23 16:12:20] 2025-10-23 20:11:08,400 | INFO     | transferring file log.46771637._104243.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6854481179/log.46771637._104243.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-23 16:12:20] 2025-10-23 20:11:08,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6854481179/log.46771637._104243.job.log.tgz.1 /tmp/boinchome/slots/1/log.46771637._104243.job
[2025-10-23 16:12:20] 2025-10-23 20:11:08,414 | INFO     | adding to output.list: log.46771637._104243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/5c/log.46771637._104243.job.log.tg
[2025-10-23 16:12:20] 2025-10-23 20:11:08,415 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 16:12:20] 2025-10-23 20:11:08,415 | INFO     | summary of transferred files:
[2025-10-23 16:12:20] 2025-10-23 20:11:08,415 | INFO     |  -- lfn=log.46771637._104243.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 16:12:20] 2025-10-23 20:11:08,415 | INFO     | stage-out finished correctly
[2025-10-23 16:12:20] 2025-10-23 20:11:09,353 | INFO     | time since job start (3540s) is within the limit (172800.0s)
[2025-10-23 16:12:20] 2025-10-23 20:11:09,820 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 16:12:20] 2025-10-23 20:11:11,355 | INFO     | time since job start (3542s) is within the limit (172800.0s)
[2025-10-23 16:12:20] 2025-10-23 20:11:11,569 | WARNING  | process 22693 can no longer be monitored (due to stat problems) - aborting
[2025-10-23 16:12:20] 2025-10-23 20:11:11,569 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6854481179/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 16:12:20] 2025-10-23 20:11:11,631 | INFO     | number of running child processes to parent process 22693: 1
[2025-10-23 16:12:20] 2025-10-23 20:11:11,631 | INFO     | maximum number of monitored processes: 6
[2025-10-23 16:12:20] 2025-10-23 20:11:11,934 | INFO     | job 6854481179 has state=finished
[2025-10-23 16:12:20] 2025-10-23 20:11:11,934 | INFO     | preparing for final server update for job 6854481179 in state='finished'
[2025-10-23 16:12:20] 2025-10-23 20:11:11,935 | INFO     | this job has now completed (state=finished)
[2025-10-23 16:12:20] 2025-10-23 20:11:11,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 16:12:20] 2025-10-23 20:11:11,935 | INFO     | log transfer has been attempted: DONE
[2025-10-23 16:12:20] 2025-10-23 20:11:11,935 | INFO     | job 6854481179 has finished - writing final server update
[2025-10-23 16:12:20] 2025-10-23 20:11:11,936 | INFO     | total number of processed events: 400 (read)
[2025-10-23 16:12:20] 2025-10-23 20:11:11,936 | INFO     | executing command: lscpu
[2025-10-23 16:12:20] 2025-10-23 20:11:11,965 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 16:12:20] 2025-10-23 20:11:13,359 | INFO     | time since job start (3544s) is within the limit (172800.0s)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,133 | INFO     | monitor loop #272: job 0:6854481179 is in state 'finished'
[2025-10-23 16:12:20] 2025-10-23 20:11:14,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 16:12:20] 2025-10-23 20:11:14,243 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2688.2807499999994
[2025-10-23 16:12:20] 2025-10-23 20:11:14,245 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6854481179/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,246 | INFO     | extracted standard info from prmon json
[2025-10-23 16:12:20] 2025-10-23 20:11:14,246 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 16:12:20] 2025-10-23 20:11:14,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 16:12:20] 2025-10-23 20:11:14,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 16:12:20] 2025-10-23 20:11:14,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 16:12:20] 2025-10-23 20:11:14,247 | INFO     | fitting pss+swap vs Time
[2025-10-23 16:12:20] 2025-10-23 20:11:14,247 | INFO     | sum of square deviations: 41117050.0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,247 | INFO     | sum of deviations: 150584660.99999997
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | mean x: 1761248580.0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | mean y: 2510269.725490196
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | -- intersect: -6447782743.903438
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | intersect: -6447782743.903438
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | chi2: 0.004141346023606857
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | -- intersect: -6447782743.903438
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | current memory leak: 3.66 B/s (using 51 data points, chi2=0.00)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | could have reported an average CPU frequency of 2911 MHz (5 samples)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,248 | INFO     | ..............................
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . Timing measurements:
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . get job = 0 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . initial setup = 2 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . payload setup = 3 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . stage-in = 0 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . payload execution = 3518 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . stage-out = 0 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | . log creation = 0 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,249 | INFO     | ..............................
[2025-10-23 16:12:20] 2025-10-23 20:11:14,302 | INFO     | 
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | job summary report
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | --------------------------------------------------
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | PanDA job id: 6854481179
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | task id: 46771637
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | errors: (none)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | pilot state: finished 
[2025-10-23 16:12:20] 2025-10-23 20:11:14,303 | INFO     | transexitcode: 0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | exeerrorcode: 0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | exeerrordiag: 
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | exitcode: 0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | exitmsg: OK
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | cpuconsumptiontime: 25784 s
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | nevents: 400
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | neventsw: 0
[2025-10-23 16:12:20] 2025-10-23 20:11:14,304 | INFO     | pid: 22693
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | pgrp: 22693
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | corecount: 8
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | event service: False
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | sizes: {0: 2348103, 1: 2348959, 3: 2349221, 12: 2349249, 3524: 2375031, 3525: 2384029, 3526: 2384213, 3531: 2384439}
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | --------------------------------------------------
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | 
[2025-10-23 16:12:20] 2025-10-23 20:11:14,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-23 16:12:20] 2025-10-23 20:11:14,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 16:12:20] 2025-10-23 20:11:14,327 | INFO     | job 6854481179 has completed (purged errors)
[2025-10-23 16:12:20] 2025-10-23 20:11:14,327 | INFO     | overall cleanup function is called
[2025-10-23 16:12:20] 2025-10-23 20:11:15,332 | INFO     | --- collectZombieJob: --- 10, [22693]
[2025-10-23 16:12:20] 2025-10-23 20:11:15,333 | INFO     | zombie collector waiting for pid 22693
[2025-10-23 16:12:20] 2025-10-23 20:11:15,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 16:12:20] 2025-10-23 20:11:15,333 | INFO     | collected zombie processes
[2025-10-23 16:12:20] 2025-10-23 20:11:15,333 | INFO     | will attempt to kill all subprocesses of pid=22693
[2025-10-23 16:12:20] 2025-10-23 20:11:15,415 | INFO     | process IDs to be killed: [22693] (in reverse order)
[2025-10-23 16:12:20] 2025-10-23 20:11:15,460 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 16:12:20] 2025-10-23 20:11:15,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 16:12:20] 2025-10-23 20:11:15,462 | INFO     | did not find any defunct processes belonging to 22693
[2025-10-23 16:12:20] 2025-10-23 20:11:15,463 | INFO     | did not find any defunct processes belonging to 22693
[2025-10-23 16:12:20] 2025-10-23 20:11:15,463 | INFO     | ready for new job
[2025-10-23 16:12:20] 2025-10-23 20:11:15,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 16:12:20] 2025-10-23 20:11:15,464 | INFO     | ***************************************
[2025-10-23 16:12:20] 2025-10-23 20:11:15,464 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 16:12:20] 2025-10-23 20:11:15,464 | INFO     | ***************************************
[2025-10-23 16:12:20] 2025-10-23 20:11:15,464 | INFO     | 
[2025-10-23 16:12:20] 2025-10-23 20:11:15,465 | INFO     | architecture information:
[2025-10-23 16:12:20] 2025-10-23 20:11:15,465 | INFO     | executing command: cat /etc/os-release
[2025-10-23 16:12:20] 2025-10-23 20:11:15,478 | INFO     | cat /etc/os-release:
[2025-10-23 16:12:20] NAME="CentOS Linux"
[2025-10-23 16:12:20] VERSION="7 (Core)"
[2025-10-23 16:12:20] ID="centos"
[2025-10-23 16:12:20] ID_LIKE="rhel fedora"
[2025-10-23 16:12:20] VERSION_ID="7"
[2025-10-23 16:12:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 16:12:20] ANSI_COLOR="0;31"
[2025-10-23 16:12:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 16:12:20] HOME_URL="https://www.centos.org/"
[2025-10-23 16:12:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 16:12:20] 
[2025-10-23 16:12:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 16:12:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 16:12:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 16:12:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 16:12:20] 
[2025-10-23 16:12:20] 2025-10-23 20:11:15,478 | INFO     | ***************************************
[2025-10-23 16:12:20] 2025-10-23 20:11:15,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-23 16:12:20] 2025-10-23 20:11:15,998 | INFO     | sufficient remaining disk space (32688308224 B)
[2025-10-23 16:12:20] 2025-10-23 20:11:15,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 16:12:20] 2025-10-23 20:11:15,999 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 16:12:20] 2025-10-23 20:11:15,999 | INFO     | update_server=False
[2025-10-23 16:12:20] 2025-10-23 20:11:15,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 16:12:20] 2025-10-23 20:11:16,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 16:12:20] 2025-10-23 20:11:16,000 | INFO     | aborting loop
[2025-10-23 16:12:20] 2025-10-23 20:11:16,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 16:12:20] 2025-10-23 20:11:16,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 16:12:20] 2025-10-23 20:11:16,273 | INFO     | all data control threads have been joined
[2025-10-23 16:12:20] 2025-10-23 20:11:16,274 | INFO     | all payload control threads have been joined
[2025-10-23 16:12:20] 2025-10-23 20:11:16,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 16:12:20] 2025-10-23 20:11:16,698 | INFO     | all job control threads have been joined
[2025-10-23 16:12:20] 2025-10-23 20:11:17,005 | INFO     | [job] retrieve thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,005 | INFO     | [job] queue monitor thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,006 | INFO     | [job] job monitor thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,278 | INFO     | [data] control thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,279 | INFO     | [payload] control thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,370 | INFO     | [data] copytool_in thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,504 | INFO     | [job] validate thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,509 | INFO     | [payload] failed_post thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,657 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,700 | INFO     | [job] control thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:17,869 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:18,497 | INFO     | [data] copytool_out thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:18,514 | INFO     | [payload] validate_post thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:20,007 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:26,366 | INFO     | job.realtimelogging is not enabled
[2025-10-23 16:12:20] 2025-10-23 20:11:27,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 16:12:20] 2025-10-23 20:11:46,570 | INFO     | PID=16313 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 16:12:20] 2025-10-23 20:11:46,570 | INFO     | .. there are 2 such processes running
[2025-10-23 16:12:20] 2025-10-23 20:11:46,571 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 16:12:20] 2025-10-23 20:11:46,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 16:12:20] 2025-10-23 20:11:46,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 16:12:20] 2025-10-23 20:12:06,704 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-10-23 16:12:20] 2025-10-23 20:12:15,016 | INFO     | [monitor] cgroup control has ended
[2025-10-23 16:12:20] 2025-10-23 20:12:15,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523872257856)>', '<ExcThread(monitor, started 140523570439936)>']
[2025-10-23 16:12:20] 2025-10-23 20:12:16,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 16:12:20] 2025-10-23 20:12:16,673 | INFO     | [monitor] control thread has ended
[2025-10-23 16:12:20] 2025-10-23 20:12:20,710 | INFO     | all workflow threads have been joined
[2025-10-23 16:12:20] 2025-10-23 20:12:20,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 16:12:20] 2025-10-23 20:12:20,711 | INFO     | traces error code: 0
[2025-10-23 16:12:20] 2025-10-23 20:12:20,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 16:12:20] 2025-10-23 20:12:20,800 [wrapper] ==== pilot stdout END ====
[2025-10-23 16:12:20] 2025-10-23 20:12:20,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 16:12:20] 2025-10-23 20:12:20,807 [wrapper] pilotpid: 16313
[2025-10-23 16:12:20] 2025-10-23 20:12:20,810 [wrapper] Pilot exit status: 0
[2025-10-23 16:12:20] 2025-10-23 20:12:20,821 [wrapper] pandaids: 6854481179
[2025-10-23 16:12:20] 2025-10-23 20:12:20,853 [wrapper] cleanup supervisor_pilot  2802 16314
[2025-10-23 16:12:20] 2025-10-23 20:12:20,856 [wrapper] Test setup, not cleaning
[2025-10-23 16:12:20] 2025-10-23 20:12:20,858 [wrapper] apfmon messages muted
[2025-10-23 16:12:20] 2025-10-23 20:12:20,861 [wrapper] ==== wrapper stdout END ====
[2025-10-23 16:12:20] 2025-10-23 20:12:20,864 [wrapper] ==== wrapper stderr END ====
[2025-10-23 16:12:20]  *** Error codes and diagnostics ***
[2025-10-23 16:12:20]     "exeErrorCode": 0,
[2025-10-23 16:12:20]     "exeErrorDiag": "",
[2025-10-23 16:12:20]     "pilotErrorCode": 0,
[2025-10-23 16:12:20]     "pilotErrorDiag": "",
[2025-10-23 16:12:20]  *** Listing of results directory ***
[2025-10-23 16:12:20] total 424928
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 23 06:20 pilot3.tar.gz
[2025-10-23 16:12:20] -rwx------ 1 boincer umatlas     36292 Oct 23 06:52 runpilot2-wrapper.sh
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 23 06:52 queuedata.json
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas       100 Oct 23 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 16:12:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 23 15:11 run_atlas
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas       105 Oct 23 15:11 job.xml
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas 227981476 Oct 23 15:12 EVNT.46771634._004127.pool.root.1
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 23 15:12 start_atlas.sh
[2025-10-23 16:12:20] drwxrwx--x 2 boincer umatlas      4096 Oct 23 15:12 shared
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas    569671 Oct 23 15:12 input.tar.gz
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas         0 Oct 23 15:12 boinc_lockfile
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas      2560 Oct 23 15:12 pandaJob.out
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas    978524 Oct 23 15:12 agis_schedconf.cvmfs.json
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas   1560740 Oct 23 15:12 agis_ddmendpoints.agis.ALL.json
[2025-10-23 16:12:20] drwx------ 5 boincer umatlas      4096 Oct 23 15:12 pilot3
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas      6134 Oct 23 16:03 init_data.xml
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas 201520628 Oct 23 16:10 HITS.46771637._104243.pool.root.1
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas       529 Oct 23 16:10 boinc_task_state.xml
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas      1044 Oct 23 16:11 memory_monitor_summary.json
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas    317072 Oct 23 16:11 log.46771637._104243.job.log.tgz.1
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas      7843 Oct 23 16:11 heartbeat.json
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas        95 Oct 23 16:11 pilot_heartbeat.json
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 23 16:12 boinc_mmap_file
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas        27 Oct 23 16:12 wrapper_checkpoint.txt
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas      4893 Oct 23 16:12 pilotlog.txt
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas    542886 Oct 23 16:12 log.46771637._104243.job.log.1
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas       357 Oct 23 16:12 output.list
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas       620 Oct 23 16:12 runtime_log
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas    880640 Oct 23 16:12 result.tar.gz
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas      8703 Oct 23 16:12 runtime_log.err
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas       656 Oct 23 16:12 jUaNDmo67V8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOY8NDmQfb7Xn.diag
[2025-10-23 16:12:20] -rw-r--r-- 1 boincer umatlas     21872 Oct 23 16:12 stderr.txt
[2025-10-23 16:12:20] HITS file was successfully produced:
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas 201520628 Oct 23 16:10 shared/HITS.pool.root.1
[2025-10-23 16:12:20]  *** Contents of shared directory: ***
[2025-10-23 16:12:20] total 420880
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas 227981476 Oct 23 15:12 ATLAS.root_0
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 23 15:12 start_atlas.sh
[2025-10-23 16:12:20] -rw-r--r-- 2 boincer umatlas    569671 Oct 23 15:12 input.tar.gz
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas 201520628 Oct 23 16:10 HITS.pool.root.1
[2025-10-23 16:12:20] -rw------- 1 boincer umatlas    880640 Oct 23 16:12 result.tar.gz
16:12:22 (12575): run_atlas exited; CPU time 25740.575742
16:12:22 (12575): called boinc_finish(0)

</stderr_txt>
]]>

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