Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:37 (24977): wrapper (7.7.26015): starting
08:40:37 (24977): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 08:40:37] Arguments: --nthreads 8
[2025-10-24 08:40:37] Threads: 8
[2025-10-24 08:40:37] Checking for CVMFS
[2025-10-24 08:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 08:40:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 08:40:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 08:40:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 08:40:40] 2.11.2.0 20954 237482 144424 152065 0 155 17219715 25165825 4632 130560 0 112858870 99.886 66310335 3225 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-24 08:40:40] CVMFS is ok
[2025-10-24 08:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 08:40:40] Checking for apptainer binary...
[2025-10-24 08:40:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 08:40:40] Running /usr/bin/apptainer --version
[2025-10-24 08:40:40] apptainer version 1.3.2-1.el7
[2025-10-24 08:40:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 08:40:49] cg-vwn319.simple-grid.lan
[2025-10-24 08:40:49] apptainer works
[2025-10-24 08:40:49] Set ATHENA_PROC_NUMBER=8
[2025-10-24 08:40:49] Set ATHENA_CORE_NUMBER=8
[2025-10-24 08:40:49] Starting ATLAS job with PandaID=6854792293
[2025-10-24 08:40:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 13:17:19]  *** The last 200 lines of the pilot log: ***
[2025-10-24 13:17:19] 2025-10-24 11:16:28,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 13:17:19] 2025-10-24 11:16:28,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 13:17:19] 2025-10-24 11:16:28,832 | INFO     | fitting pss+swap vs Time
[2025-10-24 13:17:19] 2025-10-24 11:16:28,832 | INFO     | sum of square deviations: 5325139844.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,839 | INFO     | sum of deviations: 110106227716.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,839 | INFO     | mean x: 1761296604.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,840 | INFO     | mean y: 2434553.988372093
[2025-10-24 13:17:19] 2025-10-24 11:16:28,840 | INFO     | -- intersect: -36415336748.613754
[2025-10-24 13:17:19] 2025-10-24 11:16:28,840 | INFO     | intersect: -36415336748.613754
[2025-10-24 13:17:19] 2025-10-24 11:16:28,840 | INFO     | chi2: 6.661136815354924
[2025-10-24 13:17:19] 2025-10-24 11:16:28,841 | INFO     | sum of square deviations: 5021496942.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,843 | INFO     | sum of deviations: 124593748975.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,843 | INFO     | mean x: 1761296452.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,843 | INFO     | mean y: 2441694.6363636362
[2025-10-24 13:17:19] 2025-10-24 11:16:28,843 | INFO     | -- intersect: -43698974545.52634
[2025-10-24 13:17:19] 2025-10-24 11:16:28,843 | INFO     | intersect: -43698974545.52634
[2025-10-24 13:17:19] 2025-10-24 11:16:28,844 | INFO     | chi2: 5.938744932632
[2025-10-24 13:17:19] 2025-10-24 11:16:28,844 | INFO     | current chi2=5.938744932632 (change=10.844873821803239 %)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,844 | INFO     | right removable region: 252
[2025-10-24 13:17:19] 2025-10-24 11:16:28,844 | INFO     | sum of square deviations: 5021496942.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,846 | INFO     | sum of deviations: 21707611890.000004
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | mean x: 1761296757.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | mean y: 2478912.7351778657
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | -- intersect: -7611494941.213581
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | intersect: -7611494941.213581
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | chi2: 1.9893939070302253
[2025-10-24 13:17:19] 2025-10-24 11:16:28,847 | INFO     | current chi2=1.9893939070302253 (change=70.1343184778254 %)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,848 | INFO     | sum of square deviations: 4729621702.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,850 | INFO     | sum of deviations: -17051057543.499998
[2025-10-24 13:17:19] 2025-10-24 11:16:28,850 | INFO     | mean x: 1761296909.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,850 | INFO     | mean y: 2499030.9475806453
[2025-10-24 13:17:19] 2025-10-24 11:16:28,851 | INFO     | -- intersect: 6352261622.398326
[2025-10-24 13:17:19] 2025-10-24 11:16:28,851 | INFO     | intersect: 6352261622.398326
[2025-10-24 13:17:19] 2025-10-24 11:16:28,857 | INFO     | chi2: 0.8567570238607638
[2025-10-24 13:17:19] 2025-10-24 11:16:28,858 | INFO     | current chi2=0.8567570238607638 (change=56.933766569149 %)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,858 | INFO     | sum of square deviations: 4449281562.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,860 | INFO     | sum of deviations: -16066303464.000004
[2025-10-24 13:17:19] 2025-10-24 11:16:28,860 | INFO     | mean x: 1761297062.0
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | mean y: 2498467.16872428
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | -- intersect: 6362521471.786931
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | intersect: 6362521471.786931
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | chi2: 0.8421810718226784
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | current chi2=0.8421810718226784 (change=1.7012935560659248 %)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,861 | INFO     | left removable region: 30
[2025-10-24 13:17:19] 2025-10-24 11:16:28,862 | INFO     | sum of square deviations: 3392567795.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,863 | INFO     | sum of deviations: 6910803826.000002
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | mean x: 1761297336.5
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | mean y: 2503234.153153153
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | -- intersect: -3585333798.3014617
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | intersect: -3585333798.3014617
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | chi2: 0.000383066832194868
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | -- intersect: -3585333798.3014617
[2025-10-24 13:17:19] 2025-10-24 11:16:28,864 | INFO     | current memory leak: 2.04 B/s (using 222 data points, chi2=0.00)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,865 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-24 13:17:19] 2025-10-24 11:16:28,865 | INFO     | ..............................
[2025-10-24 13:17:19] 2025-10-24 11:16:28,865 | INFO     | . Timing measurements:
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . get job = 0 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . initial setup = 5 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . payload setup = 142 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . stage-in = 0 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . payload execution = 15860 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . stage-out = 8 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | . log creation = 1 s
[2025-10-24 13:17:19] 2025-10-24 11:16:28,866 | INFO     | ..............................
[2025-10-24 13:17:19] 2025-10-24 11:16:29,003 | INFO     | 
[2025-10-24 13:17:19] 2025-10-24 11:16:29,003 | INFO     | job summary report
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | --------------------------------------------------
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | PanDA job id: 6854792293
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | task id: 46771637
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | errors: (none)
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | pilot state: finished 
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | transexitcode: 0
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | exeerrorcode: 0
[2025-10-24 13:17:19] 2025-10-24 11:16:29,004 | INFO     | exeerrordiag: 
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | exitcode: 0
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | exitmsg: OK
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | cpuconsumptiontime: 60016 s
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | nevents: 400
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | neventsw: 0
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | pid: 2894
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | pgrp: 2894
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | corecount: 8
[2025-10-24 13:17:19] 2025-10-24 11:16:29,005 | INFO     | event service: False
[2025-10-24 13:17:19] 2025-10-24 11:16:29,006 | INFO     | sizes: {0: 2348107, 1: 2348964, 2: 2348964, 12: 2348992, 23: 2349020, 34: 2349048, 45: 2349204, 55: 2349232, 66: 2349260, 77: 2349288, 88: 2349344, 93: 2349914, 98
[2025-10-24 13:17:19] 2025-10-24 11:16:29,006 | INFO     | --------------------------------------------------
[2025-10-24 13:17:19] 2025-10-24 11:16:29,006 | INFO     | 
[2025-10-24 13:17:19] 2025-10-24 11:16:29,006 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-24 13:17:19] 2025-10-24 11:16:29,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | job 6854792293 has completed (purged errors)
[2025-10-24 13:17:19] 2025-10-24 11:16:29,564 | INFO     | overall cleanup function is called
[2025-10-24 13:17:19] 2025-10-24 11:16:30,573 | INFO     | --- collectZombieJob: --- 10, [2894]
[2025-10-24 13:17:19] 2025-10-24 11:16:30,573 | INFO     | zombie collector waiting for pid 2894
[2025-10-24 13:17:19] 2025-10-24 11:16:30,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 13:17:19] 2025-10-24 11:16:30,573 | INFO     | collected zombie processes
[2025-10-24 13:17:19] 2025-10-24 11:16:30,573 | INFO     | will attempt to kill all subprocesses of pid=2894
[2025-10-24 13:17:19] 2025-10-24 11:16:30,702 | INFO     | process IDs to be killed: [2894] (in reverse order)
[2025-10-24 13:17:19] 2025-10-24 11:16:31,540 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 13:17:19] 2025-10-24 11:16:31,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 13:17:19] 2025-10-24 11:16:31,544 | INFO     | did not find any defunct processes belonging to 2894
[2025-10-24 13:17:19] 2025-10-24 11:16:31,546 | INFO     | did not find any defunct processes belonging to 2894
[2025-10-24 13:17:19] 2025-10-24 11:16:31,547 | INFO     | ready for new job
[2025-10-24 13:17:19] 2025-10-24 11:16:31,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 13:17:19] 2025-10-24 11:16:31,549 | INFO     | ***************************************
[2025-10-24 13:17:19] 2025-10-24 11:16:31,549 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 13:17:19] 2025-10-24 11:16:31,549 | INFO     | ***************************************
[2025-10-24 13:17:19] 2025-10-24 11:16:31,549 | INFO     | 
[2025-10-24 13:17:19] 2025-10-24 11:16:31,550 | INFO     | pilot is running in a VM
[2025-10-24 13:17:19] 2025-10-24 11:16:31,550 | INFO     | architecture information:
[2025-10-24 13:17:19] 2025-10-24 11:16:31,564 | INFO     | executing command: cat /etc/os-release
[2025-10-24 13:17:19] 2025-10-24 11:16:31,720 | INFO     | cat /etc/os-release:
[2025-10-24 13:17:19] NAME="CentOS Linux"
[2025-10-24 13:17:19] VERSION="7 (Core)"
[2025-10-24 13:17:19] ID="centos"
[2025-10-24 13:17:19] ID_LIKE="rhel fedora"
[2025-10-24 13:17:19] VERSION_ID="7"
[2025-10-24 13:17:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 13:17:19] ANSI_COLOR="0;31"
[2025-10-24 13:17:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 13:17:19] HOME_URL="https://www.centos.org/"
[2025-10-24 13:17:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 13:17:19] 
[2025-10-24 13:17:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 13:17:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 13:17:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 13:17:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 13:17:19] 
[2025-10-24 13:17:19] 2025-10-24 11:16:31,720 | INFO     | ***************************************
[2025-10-24 13:17:19] 2025-10-24 11:16:32,224 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-24 13:17:19] 2025-10-24 11:16:32,524 | INFO     | sufficient remaining disk space (496412655616 B)
[2025-10-24 13:17:19] 2025-10-24 11:16:32,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 13:17:19] 2025-10-24 11:16:32,524 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 13:17:19] 2025-10-24 11:16:32,524 | INFO     | update_server=False
[2025-10-24 13:17:19] 2025-10-24 11:16:32,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 13:17:19] 2025-10-24 11:16:32,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 13:17:19] 2025-10-24 11:16:32,599 | INFO     | aborting loop
[2025-10-24 13:17:19] 2025-10-24 11:16:32,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 13:17:19] 2025-10-24 11:16:32,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 13:17:19] 2025-10-24 11:16:33,245 | INFO     | all job control threads have been joined
[2025-10-24 13:17:19] 2025-10-24 11:16:33,280 | INFO     | all payload control threads have been joined
[2025-10-24 13:17:19] 2025-10-24 11:16:33,509 | INFO     | all data control threads have been joined
[2025-10-24 13:17:19] 2025-10-24 11:16:33,531 | INFO     | [job] retrieve thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:33,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:33,605 | INFO     | [job] job monitor thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:33,704 | INFO     | [payload] failed_post thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 13:17:19] 2025-10-24 11:16:34,251 | INFO     | [job] control thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,283 | INFO     | [payload] validate_post thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,284 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,286 | INFO     | [payload] control thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,368 | INFO     | [data] copytool_in thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,515 | INFO     | [data] control thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,726 | INFO     | [job] validate thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,739 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,751 | INFO     | [data] copytool_out thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:34,882 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:35,023 | INFO     | [job] queue monitor thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:16:36,907 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 13:17:19] 2025-10-24 11:17:00,783 | INFO     | PID=28744 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 13:17:19] 2025-10-24 11:17:00,783 | INFO     | .. there are 9 such processes running
[2025-10-24 13:17:19] 2025-10-24 11:17:00,783 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 13:17:19] 2025-10-24 11:17:00,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 13:17:19] 2025-10-24 11:17:00,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 13:17:19] 2025-10-24 11:17:09,301 | INFO     | [monitor] cgroup control has ended
[2025-10-24 13:17:19] 2025-10-24 11:17:10,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321806473024)>', '<ExcThread(monitor, started 140321136568064)>']
[2025-10-24 13:17:19] 2025-10-24 11:17:10,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 13:17:19] 2025-10-24 11:17:10,842 | INFO     | [monitor] control thread has ended
[2025-10-24 13:17:19] 2025-10-24 11:17:15,080 | INFO     | all workflow threads have been joined
[2025-10-24 13:17:19] 2025-10-24 11:17:15,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 13:17:19] 2025-10-24 11:17:15,080 | INFO     | traces error code: 0
[2025-10-24 13:17:19] 2025-10-24 11:17:15,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 13:17:19] 2025-10-24 11:17:15,591 [wrapper] ==== pilot stdout END ====
[2025-10-24 13:17:19] 2025-10-24 11:17:15,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 13:17:19] 2025-10-24 11:17:15,751 [wrapper] pilotpid: 28744
[2025-10-24 13:17:19] 2025-10-24 11:17:15,832 [wrapper] Pilot exit status: 0
[2025-10-24 13:17:19] 2025-10-24 11:17:16,249 [wrapper] pandaids: 6854792293
[2025-10-24 13:17:19] 2025-10-24 11:17:17,179 [wrapper] cleanup supervisor_pilot 32524 28745
[2025-10-24 13:17:19] 2025-10-24 11:17:17,268 [wrapper] Test setup, not cleaning
[2025-10-24 13:17:19] 2025-10-24 11:17:17,313 [wrapper] apfmon messages muted
[2025-10-24 13:17:19] 2025-10-24 11:17:17,323 [wrapper] ==== wrapper stdout END ====
[2025-10-24 13:17:19] 2025-10-24 11:17:17,326 [wrapper] ==== wrapper stderr END ====
[2025-10-24 13:17:19]  *** Error codes and diagnostics ***
[2025-10-24 13:17:19]     "exeErrorCode": 0,
[2025-10-24 13:17:19]     "exeErrorDiag": "",
[2025-10-24 13:17:19]     "pilotErrorCode": 0,
[2025-10-24 13:17:19]     "pilotErrorDiag": "",
[2025-10-24 13:17:19]  *** Listing of results directory ***
[2025-10-24 13:17:19] total 431016
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc    557409 Oct 23 18:24 pilot3.tar.gz
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc      5112 Oct 23 18:31 queuedata.json
[2025-10-24 13:17:19] -rwx------. 1 boinc boinc     36292 Oct 23 18:35 runpilot2-wrapper.sh
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc       100 Oct 24 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 13:17:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 08:40 run_atlas
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc       105 Oct 24 08:40 job.xml
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc 226555962 Oct 24 08:40 EVNT.46771634._004288.pool.root.1
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc      6390 Oct 24 08:40 init_data.xml
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc     15120 Oct 24 08:40 start_atlas.sh
[2025-10-24 13:17:19] drwxrwx--x. 2 boinc boinc        68 Oct 24 08:40 shared
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc    569689 Oct 24 08:40 input.tar.gz
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc         0 Oct 24 08:40 boinc_lockfile
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc      2562 Oct 24 08:40 pandaJob.out
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc    978566 Oct 24 08:44 agis_schedconf.cvmfs.json
[2025-10-24 13:17:19] drwx------. 5 boinc boinc      4096 Oct 24 08:44 pilot3
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc 205610439 Oct 24 13:13 HITS.46771637._108225.pool.root.1
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc       531 Oct 24 13:13 boinc_task_state.xml
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc      1016 Oct 24 13:14 memory_monitor_summary.json
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc   1560740 Oct 24 13:14 agis_ddmendpoints.agis.ALL.json
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc    482696 Oct 24 13:14 log.46771637._108225.job.log.tgz.1
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc        95 Oct 24 13:16 pilot_heartbeat.json
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc      7779 Oct 24 13:16 heartbeat.json
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc      8192 Oct 24 13:17 boinc_mmap_file
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc        28 Oct 24 13:17 wrapper_checkpoint.txt
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc      4885 Oct 24 13:17 pilotlog.txt
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc   2169070 Oct 24 13:17 log.46771637._108225.job.log.1
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc       357 Oct 24 13:17 output.list
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc       620 Oct 24 13:17 runtime_log
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc   2672640 Oct 24 13:17 result.tar.gz
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc       656 Oct 24 13:17 ZWnMDmfSDW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmakjMDmyXojAo.diag
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc      8717 Oct 24 13:17 runtime_log.err
[2025-10-24 13:17:19] -rw-r--r--. 1 boinc boinc     20604 Oct 24 13:17 stderr.txt
[2025-10-24 13:17:19] HITS file was successfully produced:
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc 205610439 Oct 24 13:13 shared/HITS.pool.root.1
[2025-10-24 13:17:19]  *** Contents of shared directory: ***
[2025-10-24 13:17:19] total 425228
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc 226555962 Oct 24 08:40 ATLAS.root_0
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc     15120 Oct 24 08:40 start_atlas.sh
[2025-10-24 13:17:19] -rw-r--r--. 2 boinc boinc    569689 Oct 24 08:40 input.tar.gz
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc 205610439 Oct 24 13:13 HITS.pool.root.1
[2025-10-24 13:17:19] -rw-------. 1 boinc boinc   2672640 Oct 24 13:17 result.tar.gz
13:17:20 (24977): run_atlas exited; CPU time 60245.160680
13:17:20 (24977): called boinc_finish(0)

</stderr_txt>
]]>

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