Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:03 (11834): wrapper (7.7.26015): starting
05:19:03 (11834): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 05:19:03] Arguments: --nthreads 8
[2025-10-24 05:19:03] Threads: 8
[2025-10-24 05:19:03] Checking for CVMFS
[2025-10-24 05:19:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 05:19:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 05:19:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 05:19:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 05:19:06] 2.11.2.0 9794 237127 140756 152060 0 60 19809868 25165825 4632 130560 0 119937450 99.900 64153283 3068 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-24 05:19:06] CVMFS is ok
[2025-10-24 05:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 05:19:06] Checking for apptainer binary...
[2025-10-24 05:19:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 05:19:06] Running /usr/bin/apptainer --version
[2025-10-24 05:19:06] apptainer version 1.3.2-1.el7
[2025-10-24 05:19:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 05:19:22] cg-vwn292.simple-grid.lan
[2025-10-24 05:19:22] apptainer works
[2025-10-24 05:19:22] Set ATHENA_PROC_NUMBER=8
[2025-10-24 05:19:22] Set ATHENA_CORE_NUMBER=8
[2025-10-24 05:19:22] Starting ATLAS job with PandaID=6854411774
[2025-10-24 05:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 09:56:42]  *** The last 200 lines of the pilot log: ***
[2025-10-24 09:56:42] 2025-10-24 07:55:41,071 | INFO     | time since job start (16354s) is within the limit (172800.0s)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,772 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 09:56:42] 2025-10-24 07:55:42,773 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-24 09:56:42] 2025-10-24 07:55:42,776 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6854411774/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,777 | INFO     | extracted standard info from prmon json
[2025-10-24 09:56:42] 2025-10-24 07:55:42,777 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 09:56:42] 2025-10-24 07:55:42,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 09:56:42] 2025-10-24 07:55:42,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 09:56:42] 2025-10-24 07:55:42,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 09:56:42] 2025-10-24 07:55:42,783 | INFO     | fitting pss+swap vs Time
[2025-10-24 09:56:42] 2025-10-24 07:55:42,784 | INFO     | sum of square deviations: 5449944045.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,787 | INFO     | sum of deviations: 45794596825.499985
[2025-10-24 09:56:42] 2025-10-24 07:55:42,787 | INFO     | mean x: 1761284597.5
[2025-10-24 09:56:42] 2025-10-24 07:55:42,787 | INFO     | mean y: 2471055.8961538463
[2025-10-24 09:56:42] 2025-10-24 07:55:42,787 | INFO     | -- intersect: -14797188788.588638
[2025-10-24 09:56:42] 2025-10-24 07:55:42,788 | INFO     | intersect: -14797188788.588638
[2025-10-24 09:56:42] 2025-10-24 07:55:42,788 | INFO     | chi2: 5.235665543669489
[2025-10-24 09:56:42] 2025-10-24 07:55:42,789 | INFO     | sum of square deviations: 5141528960.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,791 | INFO     | sum of deviations: 61951197278.00002
[2025-10-24 09:56:42] 2025-10-24 07:55:42,792 | INFO     | mean x: 1761284445.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,792 | INFO     | mean y: 2478911.376470588
[2025-10-24 09:56:42] 2025-10-24 07:55:42,792 | INFO     | -- intersect: -21219550754.06915
[2025-10-24 09:56:42] 2025-10-24 07:55:42,792 | INFO     | intersect: -21219550754.06915
[2025-10-24 09:56:42] 2025-10-24 07:55:42,793 | INFO     | chi2: 4.498891025382213
[2025-10-24 09:56:42] 2025-10-24 07:55:42,793 | INFO     | current chi2=4.498891025382213 (change=14.072222760258615 %)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,793 | INFO     | right removable region: 254
[2025-10-24 09:56:42] 2025-10-24 07:55:42,794 | INFO     | sum of square deviations: 5141528960.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,796 | INFO     | sum of deviations: -37375510873.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,797 | INFO     | mean x: 1761284750.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,797 | INFO     | mean y: 2512112.850980392
[2025-10-24 09:56:42] 2025-10-24 07:55:42,797 | INFO     | -- intersect: 12805885941.182793
[2025-10-24 09:56:42] 2025-10-24 07:55:42,797 | INFO     | intersect: 12805885941.182793
[2025-10-24 09:56:42] 2025-10-24 07:55:42,798 | INFO     | chi2: 1.281883479588711
[2025-10-24 09:56:42] 2025-10-24 07:55:42,798 | INFO     | current chi2=1.281883479588711 (change=75.51632225365019 %)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,798 | INFO     | sum of square deviations: 4844974562.5
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | sum of deviations: -52479831832.0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | mean x: 1761284902.5
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | mean y: 2519784.896
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | -- intersect: 19080418811.830368
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | intersect: 19080418811.830368
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | chi2: 0.981016019415109
[2025-10-24 09:56:42] 2025-10-24 07:55:42,801 | INFO     | current chi2=0.981016019415109 (change=23.47073388215711 %)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,802 | INFO     | left removable region: 20
[2025-10-24 09:56:42] 2025-10-24 07:55:42,802 | INFO     | sum of square deviations: 3972995422.5
[2025-10-24 09:56:42] 2025-10-24 07:55:42,804 | INFO     | sum of deviations: -19601005681.999996
[2025-10-24 09:56:42] 2025-10-24 07:55:42,804 | INFO     | mean x: 1761285024.5
[2025-10-24 09:56:42] 2025-10-24 07:55:42,804 | INFO     | mean y: 2520163.5726495725
[2025-10-24 09:56:42] 2025-10-24 07:55:42,804 | INFO     | -- intersect: 8691923020.000431
[2025-10-24 09:56:42] 2025-10-24 07:55:42,805 | INFO     | intersect: 8691923020.000431
[2025-10-24 09:56:42] 2025-10-24 07:55:42,805 | INFO     | chi2: 0.1498749285138314
[2025-10-24 09:56:42] 2025-10-24 07:55:42,805 | INFO     | -- intersect: 8691923020.000431
[2025-10-24 09:56:42] 2025-10-24 07:55:42,805 | INFO     | current memory leak: -4.93 B/s (using 234 data points, chi2=0.15)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | ..............................
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | . Timing measurements:
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | . get job = 0 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | . initial setup = 7 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,806 | INFO     | . payload setup = 150 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,807 | INFO     | . stage-in = 0 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,807 | INFO     | . payload execution = 15990 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,807 | INFO     | . stage-out = 1 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,807 | INFO     | . log creation = 0 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,807 | INFO     | ..............................
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | 
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | job summary report
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | --------------------------------------------------
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | PanDA job id: 6854411774
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | task id: 46771637
[2025-10-24 09:56:42] 2025-10-24 07:55:42,951 | INFO     | errors: (none)
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | pilot state: finished 
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | transexitcode: 0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | exeerrorcode: 0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | exeerrordiag: 
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | exitcode: 0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | exitmsg: OK
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | cpuconsumptiontime: 61179 s
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | nevents: 400
[2025-10-24 09:56:42] 2025-10-24 07:55:42,952 | INFO     | neventsw: 0
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | pid: 22155
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | pgrp: 22155
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | corecount: 8
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | event service: False
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | sizes: {0: 2348053, 1: 2348739, 2: 2348938, 13: 2348938, 23: 2348994, 34: 2349022, 45: 2349178, 56: 2349206, 66: 2349234, 77: 2349262, 88: 2349318, 98: 2349888, 99
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | --------------------------------------------------
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | 
[2025-10-24 09:56:42] 2025-10-24 07:55:42,953 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-24 09:56:42] 2025-10-24 07:55:43,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 09:56:42] 2025-10-24 07:55:43,012 | INFO     | job 6854411774 has completed (purged errors)
[2025-10-24 09:56:42] 2025-10-24 07:55:43,013 | INFO     | overall cleanup function is called
[2025-10-24 09:56:42] 2025-10-24 07:55:44,022 | INFO     | --- collectZombieJob: --- 10, [22155]
[2025-10-24 09:56:42] 2025-10-24 07:55:44,022 | INFO     | zombie collector waiting for pid 22155
[2025-10-24 09:56:42] 2025-10-24 07:55:44,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 09:56:42] 2025-10-24 07:55:44,022 | INFO     | collected zombie processes
[2025-10-24 09:56:42] 2025-10-24 07:55:44,022 | INFO     | will attempt to kill all subprocesses of pid=22155
[2025-10-24 09:56:42] 2025-10-24 07:55:44,135 | INFO     | process IDs to be killed: [22155] (in reverse order)
[2025-10-24 09:56:42] 2025-10-24 07:55:44,222 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 09:56:42] 2025-10-24 07:55:44,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 09:56:42] 2025-10-24 07:55:44,226 | INFO     | did not find any defunct processes belonging to 22155
[2025-10-24 09:56:42] 2025-10-24 07:55:44,230 | INFO     | did not find any defunct processes belonging to 22155
[2025-10-24 09:56:42] 2025-10-24 07:55:44,230 | INFO     | ready for new job
[2025-10-24 09:56:42] 2025-10-24 07:55:44,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 09:56:42] 2025-10-24 07:55:44,233 | INFO     | ***************************************
[2025-10-24 09:56:42] 2025-10-24 07:55:44,233 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 09:56:42] 2025-10-24 07:55:44,233 | INFO     | ***************************************
[2025-10-24 09:56:42] 2025-10-24 07:55:44,233 | INFO     | 
[2025-10-24 09:56:42] 2025-10-24 07:55:44,234 | INFO     | pilot is running in a VM
[2025-10-24 09:56:42] 2025-10-24 07:55:44,234 | INFO     | architecture information:
[2025-10-24 09:56:42] 2025-10-24 07:55:44,234 | INFO     | executing command: cat /etc/os-release
[2025-10-24 09:56:42] 2025-10-24 07:55:44,269 | INFO     | cat /etc/os-release:
[2025-10-24 09:56:42] NAME="CentOS Linux"
[2025-10-24 09:56:42] VERSION="7 (Core)"
[2025-10-24 09:56:42] ID="centos"
[2025-10-24 09:56:42] ID_LIKE="rhel fedora"
[2025-10-24 09:56:42] VERSION_ID="7"
[2025-10-24 09:56:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 09:56:42] ANSI_COLOR="0;31"
[2025-10-24 09:56:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 09:56:42] HOME_URL="https://www.centos.org/"
[2025-10-24 09:56:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 09:56:42] 
[2025-10-24 09:56:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 09:56:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 09:56:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 09:56:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 09:56:42] 
[2025-10-24 09:56:42] 2025-10-24 07:55:44,269 | INFO     | ***************************************
[2025-10-24 09:56:42] 2025-10-24 07:55:44,773 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-24 09:56:42] 2025-10-24 07:55:44,804 | INFO     | sufficient remaining disk space (496403218432 B)
[2025-10-24 09:56:42] 2025-10-24 07:55:44,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 09:56:42] 2025-10-24 07:55:44,805 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 09:56:42] 2025-10-24 07:55:44,805 | INFO     | update_server=False
[2025-10-24 09:56:42] 2025-10-24 07:55:44,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 09:56:42] 2025-10-24 07:55:44,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 09:56:42] 2025-10-24 07:55:44,805 | INFO     | aborting loop
[2025-10-24 09:56:42] 2025-10-24 07:55:44,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 09:56:42] 2025-10-24 07:55:44,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 09:56:42] 2025-10-24 07:55:45,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 09:56:42] 2025-10-24 07:55:45,384 | INFO     | all job control threads have been joined
[2025-10-24 09:56:42] 2025-10-24 07:55:45,445 | INFO     | all data control threads have been joined
[2025-10-24 09:56:42] 2025-10-24 07:55:45,808 | INFO     | [job] retrieve thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:45,809 | INFO     | [job] queue monitor thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:45,812 | INFO     | [job] job monitor thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:45,818 | INFO     | [payload] failed_post thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:45,874 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:45,989 | INFO     | all payload control threads have been joined
[2025-10-24 09:56:42] 2025-10-24 07:55:46,089 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:46,222 | INFO     | [data] copytool_in thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:46,389 | INFO     | [job] control thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:46,450 | INFO     | [data] control thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:46,994 | INFO     | [payload] control thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:47,057 | INFO     | [job] validate thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:47,259 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:47,309 | INFO     | [payload] validate_post thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:47,335 | INFO     | [data] copytool_out thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:48,815 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:55:55,561 | INFO     | job.realtimelogging is not enabled
[2025-10-24 09:56:42] 2025-10-24 07:55:56,563 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 09:56:42] 2025-10-24 07:56:14,222 | INFO     | PID=15595 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 09:56:42] 2025-10-24 07:56:14,222 | INFO     | .. there are 9 such processes running
[2025-10-24 09:56:42] 2025-10-24 07:56:14,222 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 09:56:42] 2025-10-24 07:56:14,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 09:56:42] 2025-10-24 07:56:14,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 09:56:42] 2025-10-24 07:56:34,956 | INFO     | [monitor] cgroup control has ended
[2025-10-24 09:56:42] 2025-10-24 07:56:36,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522320742208)>', '<ExcThread(monitor, started 140521649460992)>']
[2025-10-24 09:56:42] 2025-10-24 07:56:37,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 09:56:42] 2025-10-24 07:56:37,343 | INFO     | [monitor] control thread has ended
[2025-10-24 09:56:42] 2025-10-24 07:56:41,763 | INFO     | all workflow threads have been joined
[2025-10-24 09:56:42] 2025-10-24 07:56:41,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 09:56:42] 2025-10-24 07:56:41,763 | INFO     | traces error code: 0
[2025-10-24 09:56:42] 2025-10-24 07:56:41,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 09:56:42] 2025-10-24 07:56:42,015 [wrapper] ==== pilot stdout END ====
[2025-10-24 09:56:42] 2025-10-24 07:56:42,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 09:56:42] 2025-10-24 07:56:42,025 [wrapper] pilotpid: 15595
[2025-10-24 09:56:42] 2025-10-24 07:56:42,028 [wrapper] Pilot exit status: 0
[2025-10-24 09:56:42] 2025-10-24 07:56:42,047 [wrapper] pandaids: 6854411774
[2025-10-24 09:56:42] 2025-10-24 07:56:42,092 [wrapper] cleanup supervisor_pilot 19245 15596
[2025-10-24 09:56:42] 2025-10-24 07:56:42,099 [wrapper] Test setup, not cleaning
[2025-10-24 09:56:42] 2025-10-24 07:56:42,107 [wrapper] apfmon messages muted
[2025-10-24 09:56:42] 2025-10-24 07:56:42,115 [wrapper] ==== wrapper stdout END ====
[2025-10-24 09:56:42] 2025-10-24 07:56:42,119 [wrapper] ==== wrapper stderr END ====
[2025-10-24 09:56:42]  *** Error codes and diagnostics ***
[2025-10-24 09:56:42]     "exeErrorCode": 0,
[2025-10-24 09:56:42]     "exeErrorDiag": "",
[2025-10-24 09:56:42]     "pilotErrorCode": 0,
[2025-10-24 09:56:42]     "pilotErrorDiag": "",
[2025-10-24 09:56:42]  *** Listing of results directory ***
[2025-10-24 09:56:42] total 433884
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc    557409 Oct 23 11:07 pilot3.tar.gz
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc      5112 Oct 23 11:39 queuedata.json
[2025-10-24 09:56:42] -rwx------. 1 boinc boinc     36292 Oct 23 11:39 runpilot2-wrapper.sh
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc       100 Oct 24 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 09:56:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 05:19 run_atlas
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc       105 Oct 24 05:19 job.xml
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc      6391 Oct 24 05:19 init_data.xml
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc 228615970 Oct 24 05:19 EVNT.46771634._002629.pool.root.1
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc     15120 Oct 24 05:19 start_atlas.sh
[2025-10-24 09:56:42] drwxrwx--x. 2 boinc boinc        68 Oct 24 05:19 shared
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc    569681 Oct 24 05:19 input.tar.gz
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc         0 Oct 24 05:19 boinc_lockfile
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc      2560 Oct 24 05:19 pandaJob.out
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc    978566 Oct 24 05:23 agis_schedconf.cvmfs.json
[2025-10-24 09:56:42] drwx------. 5 boinc boinc      4096 Oct 24 05:23 pilot3
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc 206445983 Oct 24 09:54 HITS.46771637._103167.pool.root.1
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc       531 Oct 24 09:54 boinc_task_state.xml
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc      1017 Oct 24 09:55 memory_monitor_summary.json
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc   1560740 Oct 24 09:55 agis_ddmendpoints.agis.ALL.json
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc    496295 Oct 24 09:55 log.46771637._103167.job.log.tgz.1
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc        95 Oct 24 09:55 pilot_heartbeat.json
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc      7783 Oct 24 09:55 heartbeat.json
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc        28 Oct 24 09:56 wrapper_checkpoint.txt
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc      8192 Oct 24 09:56 boinc_mmap_file
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc      4957 Oct 24 09:56 pilotlog.txt
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc   2174864 Oct 24 09:56 log.46771637._103167.job.log.1
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc       357 Oct 24 09:56 output.list
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc       620 Oct 24 09:56 runtime_log
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc   2693120 Oct 24 09:56 result.tar.gz
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc      8717 Oct 24 09:56 runtime_log.err
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc       657 Oct 24 09:56 9oCMDmYy6V8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAO8NDmkVmrgn.diag
[2025-10-24 09:56:42] -rw-r--r--. 1 boinc boinc     20762 Oct 24 09:56 stderr.txt
[2025-10-24 09:56:42] HITS file was successfully produced:
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc 206445983 Oct 24 09:54 shared/HITS.pool.root.1
[2025-10-24 09:56:42]  *** Contents of shared directory: ***
[2025-10-24 09:56:42] total 428076
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc 228615970 Oct 24 05:19 ATLAS.root_0
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc     15120 Oct 24 05:19 start_atlas.sh
[2025-10-24 09:56:42] -rw-r--r--. 2 boinc boinc    569681 Oct 24 05:19 input.tar.gz
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc 206445983 Oct 24 09:54 HITS.pool.root.1
[2025-10-24 09:56:42] -rw-------. 1 boinc boinc   2693120 Oct 24 09:56 result.tar.gz
09:56:43 (11834): run_atlas exited; CPU time 61402.884003
09:56:43 (11834): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN