Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:55:13 (2963442): wrapper (7.7.26015): starting
14:55:13 (2963442): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 14:55:13] Arguments: --nthreads 4
[2025-10-24 14:55:13] Threads: 4
[2025-10-24 14:55:13] Checking for CVMFS
[2025-10-24 14:55:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 14:55:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 14:55:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 14:55:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 14:55:13] 2.12.7.0 1452244 10615 64924 152079 0 57 3241527 6144001 917 130560 0 16202237 99.995 384152 882 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-10-24 14:55:13] CVMFS is ok
[2025-10-24 14:55:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 14:55:13] Checking for apptainer binary...
[2025-10-24 14:55:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 14:55:13] Running /usr/bin/apptainer --version
[2025-10-24 14:55:13] apptainer version 1.4.2
[2025-10-24 14:55:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 14:55:13] Ryzen8
[2025-10-24 14:55:13] apptainer works
[2025-10-24 14:55:13] Set ATHENA_PROC_NUMBER=4
[2025-10-24 14:55:13] Set ATHENA_CORE_NUMBER=4
[2025-10-24 14:55:13] Starting ATLAS job with PandaID=6854205036
[2025-10-24 14:55:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 16:22:53]  *** The last 200 lines of the pilot log: ***
[2025-10-24 16:22:53] 2025-10-24 14:21:56,024 | INFO     | time since job start (5198s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:21:56,282 | INFO     | monitor loop #404: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:21:56,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:21:58,030 | INFO     | time since job start (5200s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:21:58,784 | INFO     | monitor loop #405: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:21:58,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:00,033 | INFO     | time since job start (5202s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:01,286 | INFO     | monitor loop #406: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:01,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:02,037 | INFO     | time since job start (5204s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:03,787 | INFO     | monitor loop #407: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:03,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:04,040 | INFO     | time since job start (5206s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:06,043 | INFO     | time since job start (5208s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:06,289 | INFO     | monitor loop #408: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:06,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:08,048 | INFO     | time since job start (5210s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:08,792 | INFO     | monitor loop #409: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:08,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:10,053 | INFO     | time since job start (5212s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:11,295 | INFO     | monitor loop #410: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:11,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:12,056 | INFO     | time since job start (5214s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:13,798 | INFO     | monitor loop #411: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:13,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:14,060 | INFO     | time since job start (5216s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:16,065 | INFO     | time since job start (5218s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:16,302 | INFO     | monitor loop #412: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:16,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:17,122 | INFO     | PID=2967156 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 16:22:53] 2025-10-24 14:22:17,123 | INFO     | .. there are 2 such processes running
[2025-10-24 16:22:53] 2025-10-24 14:22:18,123 | INFO     | time since job start (5220s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:18,805 | INFO     | monitor loop #413: job 0:6854205036 is in state 'finished'
[2025-10-24 16:22:53] 2025-10-24 14:22:18,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,127 | INFO     | time since job start (5222s) is within the limit (172800.0s)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,697 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-24 16:22:53] 2025-10-24 14:22:20,698 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4336.346916666666
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | INFO     | using path: /var/lib/boinc2/slots/2/PanDA_Pilot-6854205036/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | INFO     | extracted standard info from prmon json
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 16:22:53] 2025-10-24 14:22:20,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 16:22:53] 2025-10-24 14:22:20,701 | INFO     | fitting pss+swap vs Time
[2025-10-24 16:22:53] 2025-10-24 14:22:20,701 | INFO     | sum of square deviations: 147126479.5
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | sum of deviations: -4036470162.0000005
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | mean x: 1761313190.5
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | mean y: 2415977.512820513
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | -- intersect: 48324704144.4792
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | intersect: 48324704144.4792
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | chi2: 0.02027984447021537
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | -- intersect: 48324704144.4792
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | current memory leak: -27.44 B/s (using 78 data points, chi2=0.02)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | could have reported an average CPU frequency of 4332 MHz (6 samples)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | ..............................
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . Timing measurements:
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . get job = 0 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . initial setup = 1 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . payload setup = 2 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . stage-in = 0 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . payload execution = 5159 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . stage-out = 0 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | . log creation = 0 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,702 | INFO     | ..............................
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | 
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | job summary report
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | --------------------------------------------------
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | PanDA job id: 6854205036
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | task id: 46771637
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | errors: (none)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | pilot state: finished 
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | transexitcode: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | exeerrorcode: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | exeerrordiag: 
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | exitcode: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:20,746 | INFO     | exitmsg: OK
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | cpuconsumptiontime: 20082 s
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | nevents: 400
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | neventsw: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | pid: 2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | pgrp: 2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | corecount: 4
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | event service: False
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | sizes: {0: 2348932, 2: 2349194, 11: 2349222, 5165: 2375812, 5167: 2384868, 5209: 2385006}
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | --------------------------------------------------
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | 
[2025-10-24 16:22:53] 2025-10-24 14:22:20,747 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/2
[2025-10-24 16:22:53] 2025-10-24 14:22:20,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 16:22:53] 2025-10-24 14:22:20,775 | INFO     | job 6854205036 has completed (purged errors)
[2025-10-24 16:22:53] 2025-10-24 14:22:20,776 | INFO     | overall cleanup function is called
[2025-10-24 16:22:53] 2025-10-24 14:22:21,783 | INFO     | --- collectZombieJob: --- 10, [2973583]
[2025-10-24 16:22:53] 2025-10-24 14:22:21,783 | INFO     | zombie collector waiting for pid 2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:21,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 16:22:53] 2025-10-24 14:22:21,783 | INFO     | collected zombie processes
[2025-10-24 16:22:53] 2025-10-24 14:22:21,783 | INFO     | will attempt to kill all subprocesses of pid=2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:21,837 | INFO     | process IDs to be killed: [2973583] (in reverse order)
[2025-10-24 16:22:53] 2025-10-24 14:22:21,868 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 16:22:53] 2025-10-24 14:22:21,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 16:22:53] 2025-10-24 14:22:21,870 | INFO     | did not find any defunct processes belonging to 2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:21,872 | INFO     | did not find any defunct processes belonging to 2973583
[2025-10-24 16:22:53] 2025-10-24 14:22:21,872 | INFO     | ready for new job
[2025-10-24 16:22:53] 2025-10-24 14:22:21,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | ***************************************
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | ***************************************
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | 
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | architecture information:
[2025-10-24 16:22:53] 2025-10-24 14:22:21,874 | INFO     | executing command: cat /etc/os-release
[2025-10-24 16:22:53] 2025-10-24 14:22:21,884 | INFO     | cat /etc/os-release:
[2025-10-24 16:22:53] NAME="CentOS Linux"
[2025-10-24 16:22:53] VERSION="7 (Core)"
[2025-10-24 16:22:53] ID="centos"
[2025-10-24 16:22:53] ID_LIKE="rhel fedora"
[2025-10-24 16:22:53] VERSION_ID="7"
[2025-10-24 16:22:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 16:22:53] ANSI_COLOR="0;31"
[2025-10-24 16:22:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 16:22:53] HOME_URL="https://www.centos.org/"
[2025-10-24 16:22:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 16:22:53] 
[2025-10-24 16:22:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 16:22:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 16:22:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 16:22:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 16:22:53] 
[2025-10-24 16:22:53] 2025-10-24 14:22:21,884 | INFO     | ***************************************
[2025-10-24 16:22:53] 2025-10-24 14:22:22,387 | INFO     | executing command: df -mP /var/lib/boinc2/slots/2
[2025-10-24 16:22:53] 2025-10-24 14:22:22,401 | INFO     | sufficient remaining disk space (101231624192 B)
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | INFO     | update_server=False
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 16:22:53] 2025-10-24 14:22:22,402 | INFO     | aborting loop
[2025-10-24 16:22:53] 2025-10-24 14:22:22,675 | INFO     | all payload control threads have been joined
[2025-10-24 16:22:53] 2025-10-24 14:22:23,065 | INFO     | all data control threads have been joined
[2025-10-24 16:22:53] 2025-10-24 14:22:23,407 | INFO     | [job] retrieve thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:23,407 | INFO     | [job] queue monitor thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:23,408 | INFO     | [job] job monitor thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:23,429 | INFO     | all job control threads have been joined
[2025-10-24 16:22:53] 2025-10-24 14:22:23,679 | INFO     | [payload] control thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,026 | INFO     | [data] copytool_in thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,070 | INFO     | [data] control thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,407 | INFO     | [data] copytool_out thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,434 | INFO     | [job] control thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,593 | INFO     | [job] validate thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,738 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,796 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,808 | INFO     | [payload] validate_post thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,841 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:24,969 | INFO     | [payload] failed_post thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:25,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 16:22:53] 2025-10-24 14:22:26,836 | INFO     | [monitor] cgroup control has ended
[2025-10-24 16:22:53] 2025-10-24 14:22:29,564 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:32,788 | INFO     | job.realtimelogging is not enabled
[2025-10-24 16:22:53] 2025-10-24 14:22:33,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 16:22:53] 2025-10-24 14:22:35,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213336012608)>', '<ExcThread(monitor, started 140212990617344)>']
[2025-10-24 16:22:53] 2025-10-24 14:22:40,146 | INFO     | all workflow threads have been joined
[2025-10-24 16:22:53] 2025-10-24 14:22:40,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 16:22:53] 2025-10-24 14:22:40,146 | INFO     | traces error code: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:40,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 16:22:53] 2025-10-24 14:22:53,251 | INFO     | PID=2967156 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 16:22:53] 2025-10-24 14:22:53,251 | INFO     | .. there are 2 such processes running
[2025-10-24 16:22:53] 2025-10-24 14:22:53,251 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 16:22:53] 2025-10-24 14:22:53,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 16:22:53] 2025-10-24 14:22:53,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 16:22:53] 2025-10-24 14:22:53,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 16:22:53] 2025-10-24 14:22:53,252 | INFO     | [monitor] control thread has ended
[2025-10-24 16:22:53] 2025-10-24 14:22:53,307 [wrapper] ==== pilot stdout END ====
[2025-10-24 16:22:53] 2025-10-24 14:22:53,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 16:22:53] 2025-10-24 14:22:53,311 [wrapper] pilotpid: 2967156
[2025-10-24 16:22:53] 2025-10-24 14:22:53,312 [wrapper] Pilot exit status: 0
[2025-10-24 16:22:53] 2025-10-24 14:22:53,319 [wrapper] pandaids: 6854205036
[2025-10-24 16:22:53] 2025-10-24 14:22:53,337 [wrapper] cleanup supervisor_pilot 3006147 2967157
[2025-10-24 16:22:53] 2025-10-24 14:22:53,338 [wrapper] Test setup, not cleaning
[2025-10-24 16:22:53] 2025-10-24 14:22:53,343 [wrapper] apfmon messages muted
[2025-10-24 16:22:53] 2025-10-24 14:22:53,344 [wrapper] ==== wrapper stdout END ====
[2025-10-24 16:22:53] 2025-10-24 14:22:53,346 [wrapper] ==== wrapper stderr END ====
[2025-10-24 16:22:53]  *** Error codes and diagnostics ***
[2025-10-24 16:22:53]     "exeErrorCode": 0,
[2025-10-24 16:22:53]     "exeErrorDiag": "",
[2025-10-24 16:22:53]     "pilotErrorCode": 0,
[2025-10-24 16:22:53]     "pilotErrorDiag": "",
[2025-10-24 16:22:53]  *** Listing of results directory ***
[2025-10-24 16:22:53] insgesamt 433680
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc    557409 23. Okt 05:53 pilot3.tar.gz
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc      5112 23. Okt 06:26 queuedata.json
[2025-10-24 16:22:53] -rwx------ 1 boinc boinc     36292 23. Okt 06:28 runpilot2-wrapper.sh
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc       100 24. Okt 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 16:22:53] -rwxr-xr-x 1 boinc boinc      7986 24. Okt 14:55 run_atlas
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc       105 24. Okt 14:55 job.xml
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc     15120 24. Okt 14:55 start_atlas.sh
[2025-10-24 16:22:53] drwxrwx--x 2 boinc boinc      4096 24. Okt 14:55 shared
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc    569677 24. Okt 14:55 input.tar.gz
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc      9606 24. Okt 14:55 init_data.xml
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc 226242909 24. Okt 14:55 EVNT.46771634._003348.pool.root.1
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc         0 24. Okt 14:55 boinc_lockfile
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc      2560 24. Okt 14:55 pandaJob.out
[2025-10-24 16:22:53] -rw------- 1 boinc boinc    978588 24. Okt 14:55 agis_schedconf.cvmfs.json
[2025-10-24 16:22:53] -rw------- 1 boinc boinc   1560772 24. Okt 14:55 agis_ddmendpoints.agis.ALL.json
[2025-10-24 16:22:53] drwx------ 5 boinc boinc      4096 24. Okt 14:55 pilot3
[2025-10-24 16:22:53] -rw------- 1 boinc boinc 211826870 24. Okt 16:21 HITS.46771637._099791.pool.root.1
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc       530 24. Okt 16:21 boinc_task_state.xml
[2025-10-24 16:22:53] -rw------- 1 boinc boinc      1022 24. Okt 16:21 memory_monitor_summary.json
[2025-10-24 16:22:53] -rw------- 1 boinc boinc    269612 24. Okt 16:21 log.46771637._099791.job.log.tgz.1
[2025-10-24 16:22:53] -rw------- 1 boinc boinc      7766 24. Okt 16:22 heartbeat.json
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc        27 24. Okt 16:22 wrapper_checkpoint.txt
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc      8192 24. Okt 16:22 boinc_mmap_file
[2025-10-24 16:22:53] -rw------- 1 boinc boinc       822 24. Okt 16:22 pilotlog.txt
[2025-10-24 16:22:53] -rw------- 1 boinc boinc        95 24. Okt 16:22 pilot_heartbeat.json
[2025-10-24 16:22:53] -rw------- 1 boinc boinc    782726 24. Okt 16:22 log.46771637._099791.job.log.1
[2025-10-24 16:22:53] -rw------- 1 boinc boinc       357 24. Okt 16:22 output.list
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc       620 24. Okt 16:22 runtime_log
[2025-10-24 16:22:53] -rw------- 1 boinc boinc   1075200 24. Okt 16:22 result.tar.gz
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc      8680 24. Okt 16:22 runtime_log.err
[2025-10-24 16:22:53] -rw------- 1 boinc boinc       642 24. Okt 16:22 rLjMDmQ71V8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhriMDm9aA9on.diag
[2025-10-24 16:22:53] -rw-r--r-- 1 boinc boinc     21917 24. Okt 16:22 stderr.txt
[2025-10-24 16:22:53] HITS file was successfully produced:
[2025-10-24 16:22:53] -rw------- 1 boinc boinc 211826870 24. Okt 16:21 shared/HITS.pool.root.1
[2025-10-24 16:22:53]  *** Contents of shared directory: ***
[2025-10-24 16:22:53] insgesamt 429444
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc     15120 24. Okt 14:55 start_atlas.sh
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc    569677 24. Okt 14:55 input.tar.gz
[2025-10-24 16:22:53] -rw-r--r-- 2 boinc boinc 226242909 24. Okt 14:55 ATLAS.root_0
[2025-10-24 16:22:53] -rw------- 1 boinc boinc 211826870 24. Okt 16:21 HITS.pool.root.1
[2025-10-24 16:22:53] -rw------- 1 boinc boinc   1075200 24. Okt 16:22 result.tar.gz
16:22:54 (2963442): run_atlas exited; CPU time 20117.169236
16:22:54 (2963442): called boinc_finish(0)

</stderr_txt>
]]>

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