Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:50:08 (7072): wrapper (7.7.26015): starting
07:50:08 (7072): wrapper: running run_atlas (--nthreads 12)
[2025-10-23 07:50:08] Arguments: --nthreads 12
[2025-10-23 07:50:08] Threads: 12
[2025-10-23 07:50:08] Checking for CVMFS
[2025-10-23 07:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 07:50:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 07:50:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 07:50:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 07:50:09] 2.11.2.0 3009 23950 89320 152036 1 57 19310715 20275201 1 130560 0 19178794 99.991 817492 45726 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-23 07:50:09] CVMFS is ok
[2025-10-23 07:50:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 07:50:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 07:50:09] Further information can be found at the LHC@home message board.
[2025-10-23 07:50:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 07:50:09] Checking for apptainer binary...
[2025-10-23 07:50:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 07:50:09] Running /usr/bin/apptainer --version
[2025-10-23 07:50:09] apptainer version 1.3.2-1.el7
[2025-10-23 07:50:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 07:50:10] c-115-42.aglt2.org
[2025-10-23 07:50:10] apptainer works
[2025-10-23 07:50:10] Set ATHENA_PROC_NUMBER=12
[2025-10-23 07:50:10] Set ATHENA_CORE_NUMBER=12
[2025-10-23 07:50:10] Starting ATLAS job with PandaID=6853657925
[2025-10-23 07:50:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 09:00:37]  *** The last 200 lines of the pilot log: ***
[2025-10-23 09:00:37]  status_code=0
[2025-10-23 09:00:37]  storage_token=
[2025-10-23 09:00:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6853657925/log.46771637._089129.job.log.tgz.1
[2025-10-23 09:00:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/30/log.46771637._089129.job.log.tgz.1
[2025-10-23 09:00:37]  workdir=None
[2025-10-23 09:00:37] ]
[2025-10-23 09:00:37] 2025-10-23 12:59:30,075 | INFO     | transferring file log.46771637._089129.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6853657925/log.46771637._089129.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-23 09:00:37] 2025-10-23 12:59:30,075 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6853657925/log.46771637._089129.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._089129.job
[2025-10-23 09:00:37] 2025-10-23 12:59:30,097 | INFO     | adding to output.list: log.46771637._089129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/30/log.46771637._089129.job.log.tg
[2025-10-23 09:00:37] 2025-10-23 12:59:30,098 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 09:00:37] 2025-10-23 12:59:30,098 | INFO     | summary of transferred files:
[2025-10-23 09:00:37] 2025-10-23 12:59:30,098 | INFO     |  -- lfn=log.46771637._089129.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 09:00:37] 2025-10-23 12:59:30,098 | INFO     | stage-out finished correctly
[2025-10-23 09:00:37] 2025-10-23 12:59:30,992 | INFO     | monitor loop #310: job 0:6853657925 is in state 'finished'
[2025-10-23 09:00:37] 2025-10-23 12:59:30,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:00:37] 2025-10-23 12:59:31,045 | INFO     | PID=11128 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 09:00:37] 2025-10-23 12:59:31,810 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 09:00:37] 2025-10-23 12:59:32,046 | INFO     | time since job start (4147s) is within the limit (172800.0s)
[2025-10-23 09:00:37] 2025-10-23 12:59:33,501 | INFO     | monitor loop #311: job 0:6853657925 is in state 'finished'
[2025-10-23 09:00:37] 2025-10-23 12:59:33,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:00:37] 2025-10-23 12:59:34,051 | INFO     | time since job start (4149s) is within the limit (172800.0s)
[2025-10-23 09:00:37] 2025-10-23 12:59:34,798 | INFO     | job 6853657925 has state=finished
[2025-10-23 09:00:37] 2025-10-23 12:59:34,799 | INFO     | preparing for final server update for job 6853657925 in state='finished'
[2025-10-23 09:00:37] 2025-10-23 12:59:34,799 | INFO     | this job has now completed (state=finished)
[2025-10-23 09:00:37] 2025-10-23 12:59:34,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 09:00:37] 2025-10-23 12:59:34,800 | INFO     | log transfer has been attempted: DONE
[2025-10-23 09:00:37] 2025-10-23 12:59:34,800 | INFO     | job 6853657925 has finished - writing final server update
[2025-10-23 09:00:37] 2025-10-23 12:59:34,800 | INFO     | total number of processed events: 400 (read)
[2025-10-23 09:00:37] 2025-10-23 12:59:34,801 | INFO     | executing command: lscpu
[2025-10-23 09:00:37] 2025-10-23 12:59:34,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 09:00:37] 2025-10-23 12:59:36,005 | INFO     | monitor loop #312: job 0:6853657925 is in state 'finished'
[2025-10-23 09:00:37] 2025-10-23 12:59:36,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:00:37] 2025-10-23 12:59:36,057 | INFO     | time since job start (4151s) is within the limit (172800.0s)
[2025-10-23 09:00:37] 2025-10-23 12:59:38,062 | INFO     | time since job start (4153s) is within the limit (172800.0s)
[2025-10-23 09:00:37] 2025-10-23 12:59:38,510 | INFO     | monitor loop #313: job 0:6853657925 is in state 'finished'
[2025-10-23 09:00:37] 2025-10-23 12:59:38,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,067 | INFO     | time since job start (4155s) is within the limit (172800.0s)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,401 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-23 09:00:37] 2025-10-23 12:59:40,405 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-10-23 09:00:37] 2025-10-23 12:59:40,407 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6853657925/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,408 | INFO     | extracted standard info from prmon json
[2025-10-23 09:00:37] 2025-10-23 12:59:40,408 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 09:00:37] 2025-10-23 12:59:40,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 09:00:37] 2025-10-23 12:59:40,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 09:00:37] 2025-10-23 12:59:40,409 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 09:00:37] 2025-10-23 12:59:40,411 | INFO     | fitting pss+swap vs Time
[2025-10-23 09:00:37] 2025-10-23 12:59:40,411 | INFO     | sum of square deviations: 70364110.0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,412 | INFO     | sum of deviations: -6524530476.000003
[2025-10-23 09:00:37] 2025-10-23 12:59:40,412 | INFO     | mean x: 1761222388.0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,412 | INFO     | mean y: 2793845.295081967
[2025-10-23 09:00:37] 2025-10-23 12:59:40,412 | INFO     | -- intersect: 163312599732.40857
[2025-10-23 09:00:37] 2025-10-23 12:59:40,412 | INFO     | intersect: 163312599732.40857
[2025-10-23 09:00:37] 2025-10-23 12:59:40,413 | INFO     | chi2: 0.04979000973660658
[2025-10-23 09:00:37] 2025-10-23 12:59:40,413 | INFO     | -- intersect: 163312599732.40857
[2025-10-23 09:00:37] 2025-10-23 12:59:40,413 | INFO     | current memory leak: -92.73 B/s (using 61 data points, chi2=0.05)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | could have reported an average CPU frequency of 2152 MHz (6 samples)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | ..............................
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | . Timing measurements:
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | . get job = 0 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | . initial setup = 2 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,414 | INFO     | . payload setup = 6 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,415 | INFO     | . stage-in = 0 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,415 | INFO     | . payload execution = 4117 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,415 | INFO     | . stage-out = 0 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,415 | INFO     | . log creation = 0 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,415 | INFO     | ..............................
[2025-10-23 09:00:37] 2025-10-23 12:59:40,875 | INFO     | 
[2025-10-23 09:00:37] 2025-10-23 12:59:40,876 | INFO     | job summary report
[2025-10-23 09:00:37] 2025-10-23 12:59:40,876 | INFO     | --------------------------------------------------
[2025-10-23 09:00:37] 2025-10-23 12:59:40,876 | INFO     | PanDA job id: 6853657925
[2025-10-23 09:00:37] 2025-10-23 12:59:40,876 | INFO     | task id: 46771637
[2025-10-23 09:00:37] 2025-10-23 12:59:40,876 | INFO     | errors: (none)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | pilot state: finished 
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | transexitcode: 0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | exeerrorcode: 0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | exeerrordiag: 
[2025-10-23 09:00:37] 2025-10-23 12:59:40,877 | INFO     | exitcode: 0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | exitmsg: OK
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | cpuconsumptiontime: 44536 s
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | nevents: 400
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | neventsw: 0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | pid: 17492
[2025-10-23 09:00:37] 2025-10-23 12:59:40,878 | INFO     | pgrp: 17492
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | corecount: 12
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | event service: False
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | sizes: {0: 2348931, 5: 2349193, 11: 2349249, 4127: 2375118, 4129: 2384116, 4130: 2384172, 4139: 2384494}
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | --------------------------------------------------
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | 
[2025-10-23 09:00:37] 2025-10-23 12:59:40,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-23 09:00:37] 2025-10-23 12:59:40,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 09:00:37] 2025-10-23 12:59:40,910 | INFO     | job 6853657925 has completed (purged errors)
[2025-10-23 09:00:37] 2025-10-23 12:59:40,910 | INFO     | overall cleanup function is called
[2025-10-23 09:00:37] 2025-10-23 12:59:41,918 | INFO     | --- collectZombieJob: --- 10, [17492]
[2025-10-23 09:00:37] 2025-10-23 12:59:41,919 | INFO     | zombie collector waiting for pid 17492
[2025-10-23 09:00:37] 2025-10-23 12:59:41,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 09:00:37] 2025-10-23 12:59:41,919 | INFO     | collected zombie processes
[2025-10-23 09:00:37] 2025-10-23 12:59:41,919 | INFO     | will attempt to kill all subprocesses of pid=17492
[2025-10-23 09:00:37] 2025-10-23 12:59:42,008 | INFO     | process IDs to be killed: [17492] (in reverse order)
[2025-10-23 09:00:37] 2025-10-23 12:59:42,058 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 09:00:37] 2025-10-23 12:59:42,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 09:00:37] 2025-10-23 12:59:42,062 | INFO     | did not find any defunct processes belonging to 17492
[2025-10-23 09:00:37] 2025-10-23 12:59:42,065 | INFO     | did not find any defunct processes belonging to 17492
[2025-10-23 09:00:37] 2025-10-23 12:59:42,065 | INFO     | ready for new job
[2025-10-23 09:00:37] 2025-10-23 12:59:42,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 09:00:37] 2025-10-23 12:59:42,067 | INFO     | ***************************************
[2025-10-23 09:00:37] 2025-10-23 12:59:42,067 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 09:00:37] 2025-10-23 12:59:42,067 | INFO     | ***************************************
[2025-10-23 09:00:37] 2025-10-23 12:59:42,067 | INFO     | 
[2025-10-23 09:00:37] 2025-10-23 12:59:42,067 | INFO     | architecture information:
[2025-10-23 09:00:37] 2025-10-23 12:59:42,068 | INFO     | executing command: cat /etc/os-release
[2025-10-23 09:00:37] 2025-10-23 12:59:42,083 | INFO     | cat /etc/os-release:
[2025-10-23 09:00:37] NAME="CentOS Linux"
[2025-10-23 09:00:37] VERSION="7 (Core)"
[2025-10-23 09:00:37] ID="centos"
[2025-10-23 09:00:37] ID_LIKE="rhel fedora"
[2025-10-23 09:00:37] VERSION_ID="7"
[2025-10-23 09:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 09:00:37] ANSI_COLOR="0;31"
[2025-10-23 09:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 09:00:37] HOME_URL="https://www.centos.org/"
[2025-10-23 09:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 09:00:37] 
[2025-10-23 09:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 09:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 09:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 09:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 09:00:37] 
[2025-10-23 09:00:37] 2025-10-23 12:59:42,083 | INFO     | ***************************************
[2025-10-23 09:00:37] 2025-10-23 12:59:42,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-23 09:00:37] 2025-10-23 12:59:42,602 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-23 09:00:37] 2025-10-23 12:59:42,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 09:00:37] 2025-10-23 12:59:42,603 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 09:00:37] 2025-10-23 12:59:42,603 | INFO     | update_server=False
[2025-10-23 09:00:37] 2025-10-23 12:59:42,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 09:00:37] 2025-10-23 12:59:42,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 09:00:37] 2025-10-23 12:59:42,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 09:00:37] 2025-10-23 12:59:42,604 | INFO     | aborting loop
[2025-10-23 09:00:37] 2025-10-23 12:59:42,937 | INFO     | all payload control threads have been joined
[2025-10-23 09:00:37] 2025-10-23 12:59:43,133 | INFO     | all data control threads have been joined
[2025-10-23 09:00:37] 2025-10-23 12:59:43,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 09:00:37] 2025-10-23 12:59:43,484 | INFO     | all job control threads have been joined
[2025-10-23 09:00:37] 2025-10-23 12:59:43,609 | INFO     | [job] retrieve thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,609 | INFO     | [job] job monitor thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,652 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,663 | INFO     | [data] copytool_in thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,682 | INFO     | [payload] failed_post thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:43,942 | INFO     | [payload] control thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:44,138 | INFO     | [data] control thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:44,397 | INFO     | [payload] validate_post thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:44,490 | INFO     | [job] control thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:44,921 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:44,925 | INFO     | [job] validate thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:45,195 | INFO     | [data] copytool_out thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:45,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 09:00:37] 2025-10-23 12:59:46,506 | INFO     | [job] queue monitor thread has finished
[2025-10-23 09:00:37] 2025-10-23 12:59:46,609 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 09:00:37] 2025-10-23 13:00:13,253 | INFO     | PID=11128 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 09:00:37] 2025-10-23 13:00:13,253 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 09:00:37] 2025-10-23 13:00:13,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 09:00:37] 2025-10-23 13:00:13,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 09:00:37] 2025-10-23 13:00:31,419 | INFO     | [monitor] cgroup control has ended
[2025-10-23 09:00:37] 2025-10-23 13:00:32,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940003772224)>', '<ExcThread(monitor, started 139939278739200)>']
[2025-10-23 09:00:37] 2025-10-23 13:00:33,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 09:00:37] 2025-10-23 13:00:33,327 | INFO     | [monitor] control thread has ended
[2025-10-23 09:00:37] 2025-10-23 13:00:37,374 | INFO     | all workflow threads have been joined
[2025-10-23 09:00:37] 2025-10-23 13:00:37,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 09:00:37] 2025-10-23 13:00:37,375 | INFO     | traces error code: 0
[2025-10-23 09:00:37] 2025-10-23 13:00:37,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 09:00:37] 2025-10-23 13:00:37,486 [wrapper] ==== pilot stdout END ====
[2025-10-23 09:00:37] 2025-10-23 13:00:37,489 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 09:00:37] 2025-10-23 13:00:37,493 [wrapper] pilotpid: 11128
[2025-10-23 09:00:37] 2025-10-23 13:00:37,496 [wrapper] Pilot exit status: 0
[2025-10-23 09:00:37] 2025-10-23 13:00:37,512 [wrapper] pandaids: 6853657925
[2025-10-23 09:00:37] 2025-10-23 13:00:37,560 [wrapper] cleanup supervisor_pilot 13462 11129
[2025-10-23 09:00:37] 2025-10-23 13:00:37,563 [wrapper] Test setup, not cleaning
[2025-10-23 09:00:37] 2025-10-23 13:00:37,568 [wrapper] apfmon messages muted
[2025-10-23 09:00:37] 2025-10-23 13:00:37,572 [wrapper] ==== wrapper stdout END ====
[2025-10-23 09:00:37] 2025-10-23 13:00:37,575 [wrapper] ==== wrapper stderr END ====
[2025-10-23 09:00:37]  *** Error codes and diagnostics ***
[2025-10-23 09:00:37]     "exeErrorCode": 0,
[2025-10-23 09:00:37]     "exeErrorDiag": "",
[2025-10-23 09:00:37]     "pilotErrorCode": 0,
[2025-10-23 09:00:37]     "pilotErrorDiag": "",
[2025-10-23 09:00:37]  *** Listing of results directory ***
[2025-10-23 09:00:37] total 428584
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas    557409 Oct 22 10:59 pilot3.tar.gz
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas      5112 Oct 22 11:16 queuedata.json
[2025-10-23 09:00:37] -rwx------ 1 boincer umatlas     36292 Oct 22 11:17 runpilot2-wrapper.sh
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas       100 Oct 23 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 09:00:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct 23 07:50 run_atlas
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas       105 Oct 23 07:50 job.xml
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas 230712478 Oct 23 07:50 EVNT.46771634._003639.pool.root.1
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 23 07:50 start_atlas.sh
[2025-10-23 09:00:37] drwxrwx--x 2 boincer umatlas      4096 Oct 23 07:50 shared
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas    569679 Oct 23 07:50 input.tar.gz
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas         0 Oct 23 07:50 boinc_lockfile
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas      2560 Oct 23 07:50 pandaJob.out
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas    978095 Oct 23 07:50 agis_schedconf.cvmfs.json
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas   1560740 Oct 23 07:50 agis_ddmendpoints.agis.ALL.json
[2025-10-23 09:00:37] drwx------ 5 boincer umatlas      4096 Oct 23 07:50 pilot3
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas      5953 Oct 23 08:56 init_data.xml
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas 202287688 Oct 23 08:59 HITS.46771637._089129.pool.root.1
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas        95 Oct 23 08:59 pilot_heartbeat.json
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas       529 Oct 23 08:59 boinc_task_state.xml
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas      1049 Oct 23 08:59 memory_monitor_summary.json
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas    376060 Oct 23 08:59 log.46771637._089129.job.log.tgz.1
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas      7855 Oct 23 08:59 heartbeat.json
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas      8192 Oct 23 09:00 boinc_mmap_file
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas        27 Oct 23 09:00 wrapper_checkpoint.txt
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas      4746 Oct 23 09:00 pilotlog.txt
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas    608463 Oct 23 09:00 log.46771637._089129.job.log.1
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas       357 Oct 23 09:00 output.list
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas       620 Oct 23 09:00 runtime_log
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas   1003520 Oct 23 09:00 result.tar.gz
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas       659 Oct 23 09:00 U4KODmplpV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF35NDm7I9TRo.diag
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas      8705 Oct 23 09:00 runtime_log.err
[2025-10-23 09:00:37] -rw-r--r-- 1 boincer umatlas     22207 Oct 23 09:00 stderr.txt
[2025-10-23 09:00:37] HITS file was successfully produced:
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas 202287688 Oct 23 08:59 shared/HITS.pool.root.1
[2025-10-23 09:00:37]  *** Contents of shared directory: ***
[2025-10-23 09:00:37] total 424416
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas 230712478 Oct 23 07:50 ATLAS.root_0
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 23 07:50 start_atlas.sh
[2025-10-23 09:00:37] -rw-r--r-- 2 boincer umatlas    569679 Oct 23 07:50 input.tar.gz
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas 202287688 Oct 23 08:59 HITS.pool.root.1
[2025-10-23 09:00:37] -rw------- 1 boincer umatlas   1003520 Oct 23 09:00 result.tar.gz
09:00:39 (7072): run_atlas exited; CPU time 44533.342998
09:00:39 (7072): called boinc_finish(0)

</stderr_txt>
]]>

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