Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:01 (1856): wrapper (7.7.26015): starting
00:41:01 (1856): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 00:41:01] Arguments: --nthreads 8
[2025-10-24 00:41:01] Threads: 8
[2025-10-24 00:41:01] Checking for CVMFS
[2025-10-24 00:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 00:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 00:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 00:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 00:41:04] 2.11.2.0 9794 236849 140212 152053 2 60 19755134 25165824 4632 130560 0 119826571 99.900 64143981 3071 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-24 00:41:04] CVMFS is ok
[2025-10-24 00:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 00:41:04] Checking for apptainer binary...
[2025-10-24 00:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 00:41:04] Running /usr/bin/apptainer --version
[2025-10-24 00:41:04] apptainer version 1.3.2-1.el7
[2025-10-24 00:41:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 00:41:27] cg-vwn292.simple-grid.lan
[2025-10-24 00:41:27] apptainer works
[2025-10-24 00:41:27] Set ATHENA_PROC_NUMBER=8
[2025-10-24 00:41:27] Set ATHENA_CORE_NUMBER=8
[2025-10-24 00:41:28] Starting ATLAS job with PandaID=6854206356
[2025-10-24 00:41:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 05:18:57]  *** The last 200 lines of the pilot log: ***
[2025-10-24 05:18:57] 2025-10-24 03:17:49,707 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 05:18:57] 2025-10-24 03:17:49,709 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-24 05:18:57] 2025-10-24 03:17:49,710 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6854206356/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,711 | INFO     | extracted standard info from prmon json
[2025-10-24 05:18:57] 2025-10-24 03:17:49,711 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 05:18:57] 2025-10-24 03:17:49,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 05:18:57] 2025-10-24 03:17:49,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 05:18:57] 2025-10-24 03:17:49,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 05:18:57] 2025-10-24 03:17:49,717 | INFO     | fitting pss+swap vs Time
[2025-10-24 05:18:57] 2025-10-24 03:17:49,718 | INFO     | sum of square deviations: 5387301010.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,720 | INFO     | sum of deviations: 76831421134.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,720 | INFO     | mean x: 1761267885.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,721 | INFO     | mean y: 2455027.555984556
[2025-10-24 05:18:57] 2025-10-24 03:17:49,721 | INFO     | -- intersect: -25116006768.25603
[2025-10-24 05:18:57] 2025-10-24 03:17:49,721 | INFO     | intersect: -25116006768.25603
[2025-10-24 05:18:57] 2025-10-24 03:17:49,721 | INFO     | chi2: 4.8034965841754556
[2025-10-24 05:18:57] 2025-10-24 03:17:49,722 | INFO     | sum of square deviations: 5081276667.5
[2025-10-24 05:18:57] 2025-10-24 03:17:49,724 | INFO     | sum of deviations: 92851374602.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,724 | INFO     | mean x: 1761267732.5
[2025-10-24 05:18:57] 2025-10-24 03:17:49,724 | INFO     | mean y: 2462871.196850394
[2025-10-24 05:18:57] 2025-10-24 03:17:49,724 | INFO     | -- intersect: -32181600447.133102
[2025-10-24 05:18:57] 2025-10-24 03:17:49,725 | INFO     | intersect: -32181600447.133102
[2025-10-24 05:18:57] 2025-10-24 03:17:49,725 | INFO     | chi2: 3.9892244737732687
[2025-10-24 05:18:57] 2025-10-24 03:17:49,725 | INFO     | current chi2=3.9892244737732687 (change=16.951653782469812 %)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,725 | INFO     | right removable region: 253
[2025-10-24 05:18:57] 2025-10-24 03:17:49,726 | INFO     | sum of square deviations: 5081276667.5
[2025-10-24 05:18:57] 2025-10-24 03:17:49,728 | INFO     | sum of deviations: -3749384581.000004
[2025-10-24 05:18:57] 2025-10-24 03:17:49,728 | INFO     | mean x: 1761268037.5
[2025-10-24 05:18:57] 2025-10-24 03:17:49,728 | INFO     | mean y: 2495113.6614173227
[2025-10-24 05:18:57] 2025-10-24 03:17:49,728 | INFO     | -- intersect: 1302103785.8378248
[2025-10-24 05:18:57] 2025-10-24 03:17:49,729 | INFO     | intersect: 1302103785.8378248
[2025-10-24 05:18:57] 2025-10-24 03:17:49,729 | INFO     | chi2: 1.0791070740214983
[2025-10-24 05:18:57] 2025-10-24 03:17:49,729 | INFO     | current chi2=1.0791070740214983 (change=77.53496739070269 %)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,730 | INFO     | sum of square deviations: 4787066500.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,732 | INFO     | sum of deviations: -17385499102.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,732 | INFO     | mean x: 1761268190.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,732 | INFO     | mean y: 2502122.9076305223
[2025-10-24 05:18:57] 2025-10-24 03:17:49,732 | INFO     | -- intersect: 6399013751.81986
[2025-10-24 05:18:57] 2025-10-24 03:17:49,732 | INFO     | intersect: 6399013751.81986
[2025-10-24 05:18:57] 2025-10-24 03:17:49,733 | INFO     | chi2: 0.9175225552797222
[2025-10-24 05:18:57] 2025-10-24 03:17:49,733 | INFO     | current chi2=0.9175225552797222 (change=14.973909691797369 %)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,733 | INFO     | left removable region: 20
[2025-10-24 05:18:57] 2025-10-24 03:17:49,733 | INFO     | sum of square deviations: 3922276332.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | sum of deviations: 8733635228.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | mean x: 1761268312.0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | mean y: 2506068.051502146
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | -- intersect: -3919266309.418841
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | intersect: -3919266309.418841
[2025-10-24 05:18:57] 2025-10-24 03:17:49,736 | INFO     | chi2: 0.0018779473758743705
[2025-10-24 05:18:57] 2025-10-24 03:17:49,737 | INFO     | -- intersect: -3919266309.418841
[2025-10-24 05:18:57] 2025-10-24 03:17:49,737 | INFO     | current memory leak: 2.23 B/s (using 233 data points, chi2=0.00)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,737 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | ..............................
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | . Timing measurements:
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | . get job = 0 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | . initial setup = 5 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | . payload setup = 136 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,738 | INFO     | . stage-in = 0 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,739 | INFO     | . payload execution = 15914 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,739 | INFO     | . stage-out = 4 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,739 | INFO     | . log creation = 1 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,739 | INFO     | ..............................
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | 
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | job summary report
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | --------------------------------------------------
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | PanDA job id: 6854206356
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | task id: 46771637
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | errors: (none)
[2025-10-24 05:18:57] 2025-10-24 03:17:49,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | pilot state: finished 
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | transexitcode: 0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | exeerrorcode: 0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | exeerrordiag: 
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | exitcode: 0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | exitmsg: OK
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | cpuconsumptiontime: 60275 s
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | nevents: 400
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | neventsw: 0
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | pid: 12264
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | pgrp: 12264
[2025-10-24 05:18:57] 2025-10-24 03:17:49,886 | INFO     | corecount: 8
[2025-10-24 05:18:57] 2025-10-24 03:17:49,887 | INFO     | event service: False
[2025-10-24 05:18:57] 2025-10-24 03:17:49,887 | INFO     | sizes: {0: 2348103, 1: 2348789, 2: 2348988, 13: 2348988, 23: 2349044, 34: 2349072, 45: 2349228, 56: 2349256, 66: 2349284, 77: 2349312, 88: 2349368, 95: 2349938, 98
[2025-10-24 05:18:57] 2025-10-24 03:17:49,887 | INFO     | --------------------------------------------------
[2025-10-24 05:18:57] 2025-10-24 03:17:49,887 | INFO     | 
[2025-10-24 05:18:57] 2025-10-24 03:17:49,887 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-24 05:18:57] 2025-10-24 03:17:50,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 05:18:57] 2025-10-24 03:17:50,349 | INFO     | job 6854206356 has completed (purged errors)
[2025-10-24 05:18:57] 2025-10-24 03:17:50,350 | INFO     | overall cleanup function is called
[2025-10-24 05:18:57] 2025-10-24 03:17:50,796 | INFO     | PID=5658 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-24 05:18:57] 2025-10-24 03:17:50,797 | INFO     | .. there are 9 such processes running
[2025-10-24 05:18:57] 2025-10-24 03:17:51,359 | INFO     | --- collectZombieJob: --- 10, [12264]
[2025-10-24 05:18:57] 2025-10-24 03:17:51,359 | INFO     | zombie collector waiting for pid 12264
[2025-10-24 05:18:57] 2025-10-24 03:17:51,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 05:18:57] 2025-10-24 03:17:51,359 | INFO     | collected zombie processes
[2025-10-24 05:18:57] 2025-10-24 03:17:51,359 | INFO     | will attempt to kill all subprocesses of pid=12264
[2025-10-24 05:18:57] 2025-10-24 03:17:51,472 | INFO     | process IDs to be killed: [12264] (in reverse order)
[2025-10-24 05:18:57] 2025-10-24 03:17:52,291 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 05:18:57] 2025-10-24 03:17:52,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 05:18:57] 2025-10-24 03:17:52,295 | INFO     | did not find any defunct processes belonging to 12264
[2025-10-24 05:18:57] 2025-10-24 03:17:52,303 | INFO     | did not find any defunct processes belonging to 12264
[2025-10-24 05:18:57] 2025-10-24 03:17:52,303 | INFO     | ready for new job
[2025-10-24 05:18:57] 2025-10-24 03:17:52,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 05:18:57] 2025-10-24 03:17:52,306 | INFO     | ***************************************
[2025-10-24 05:18:57] 2025-10-24 03:17:52,306 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 05:18:57] 2025-10-24 03:17:52,306 | INFO     | ***************************************
[2025-10-24 05:18:57] 2025-10-24 03:17:52,307 | INFO     | 
[2025-10-24 05:18:57] 2025-10-24 03:17:52,307 | INFO     | pilot is running in a VM
[2025-10-24 05:18:57] 2025-10-24 03:17:52,307 | INFO     | architecture information:
[2025-10-24 05:18:57] 2025-10-24 03:17:52,312 | INFO     | executing command: cat /etc/os-release
[2025-10-24 05:18:57] 2025-10-24 03:17:52,531 | INFO     | cat /etc/os-release:
[2025-10-24 05:18:57] NAME="CentOS Linux"
[2025-10-24 05:18:57] VERSION="7 (Core)"
[2025-10-24 05:18:57] ID="centos"
[2025-10-24 05:18:57] ID_LIKE="rhel fedora"
[2025-10-24 05:18:57] VERSION_ID="7"
[2025-10-24 05:18:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 05:18:57] ANSI_COLOR="0;31"
[2025-10-24 05:18:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 05:18:57] HOME_URL="https://www.centos.org/"
[2025-10-24 05:18:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 05:18:57] 
[2025-10-24 05:18:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 05:18:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 05:18:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 05:18:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 05:18:57] 
[2025-10-24 05:18:57] 2025-10-24 03:17:52,532 | INFO     | ***************************************
[2025-10-24 05:18:57] 2025-10-24 03:17:53,035 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-24 05:18:57] 2025-10-24 03:17:53,242 | INFO     | sufficient remaining disk space (496496541696 B)
[2025-10-24 05:18:57] 2025-10-24 03:17:53,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 05:18:57] 2025-10-24 03:17:53,243 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 05:18:57] 2025-10-24 03:17:53,243 | INFO     | update_server=False
[2025-10-24 05:18:57] 2025-10-24 03:17:53,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 05:18:57] 2025-10-24 03:17:53,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 05:18:57] 2025-10-24 03:17:53,249 | INFO     | aborting loop
[2025-10-24 05:18:57] 2025-10-24 03:17:53,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 05:18:57] 2025-10-24 03:17:53,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 05:18:57] 2025-10-24 03:17:53,921 | INFO     | all data control threads have been joined
[2025-10-24 05:18:57] 2025-10-24 03:17:54,106 | INFO     | all payload control threads have been joined
[2025-10-24 05:18:57] 2025-10-24 03:17:54,249 | INFO     | [job] retrieve thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,255 | INFO     | [job] job monitor thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,318 | INFO     | [job] validate thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,369 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,415 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,673 | INFO     | all job control threads have been joined
[2025-10-24 05:18:57] 2025-10-24 03:17:54,787 | INFO     | [payload] validate_post thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:54,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 05:18:57] 2025-10-24 03:17:54,927 | INFO     | [data] control thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,112 | INFO     | [payload] control thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,256 | INFO     | [data] copytool_out thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,360 | INFO     | [payload] failed_post thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,389 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,567 | INFO     | [data] copytool_in thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,679 | INFO     | [job] control thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:55,906 | INFO     | [job] queue monitor thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:17:57,488 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 05:18:57] 2025-10-24 03:18:22,937 | INFO     | PID=5658 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-24 05:18:57] 2025-10-24 03:18:22,937 | INFO     | .. there are 9 such processes running
[2025-10-24 05:18:57] 2025-10-24 03:18:22,938 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 05:18:57] 2025-10-24 03:18:22,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 05:18:57] 2025-10-24 03:18:22,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 05:18:57] 2025-10-24 03:18:49,092 | INFO     | [monitor] cgroup control has ended
[2025-10-24 05:18:57] 2025-10-24 03:18:49,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927083394880)>', '<ExcThread(monitor, started 139926628701952)>']
[2025-10-24 05:18:57] 2025-10-24 03:18:50,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 05:18:57] 2025-10-24 03:18:50,099 | INFO     | [monitor] control thread has ended
[2025-10-24 05:18:57] 2025-10-24 03:18:54,827 | INFO     | all workflow threads have been joined
[2025-10-24 05:18:57] 2025-10-24 03:18:54,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 05:18:57] 2025-10-24 03:18:54,827 | INFO     | traces error code: 0
[2025-10-24 05:18:57] 2025-10-24 03:18:54,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 05:18:57] 2025-10-24 03:18:55,159 [wrapper] ==== pilot stdout END ====
[2025-10-24 05:18:57] 2025-10-24 03:18:55,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 05:18:57] 2025-10-24 03:18:55,300 [wrapper] pilotpid: 5658
[2025-10-24 05:18:57] 2025-10-24 03:18:55,364 [wrapper] Pilot exit status: 0
[2025-10-24 05:18:57] 2025-10-24 03:18:55,398 [wrapper] pandaids: 6854206356
[2025-10-24 05:18:57] 2025-10-24 03:18:56,150 [wrapper] cleanup supervisor_pilot  9313 5659
[2025-10-24 05:18:57] 2025-10-24 03:18:56,187 [wrapper] Test setup, not cleaning
[2025-10-24 05:18:57] 2025-10-24 03:18:56,190 [wrapper] apfmon messages muted
[2025-10-24 05:18:57] 2025-10-24 03:18:56,193 [wrapper] ==== wrapper stdout END ====
[2025-10-24 05:18:57] 2025-10-24 03:18:56,196 [wrapper] ==== wrapper stderr END ====
[2025-10-24 05:18:57]  *** Error codes and diagnostics ***
[2025-10-24 05:18:57]     "exeErrorCode": 0,
[2025-10-24 05:18:57]     "exeErrorDiag": "",
[2025-10-24 05:18:57]     "pilotErrorCode": 0,
[2025-10-24 05:18:57]     "pilotErrorDiag": "",
[2025-10-24 05:18:57]  *** Listing of results directory ***
[2025-10-24 05:18:57] total 435072
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc    557409 Oct 23 05:53 pilot3.tar.gz
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc      5112 Oct 23 06:40 queuedata.json
[2025-10-24 05:18:57] -rwx------. 1 boinc boinc     36292 Oct 23 06:44 runpilot2-wrapper.sh
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc       100 Oct 24 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 05:18:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 00:41 run_atlas
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc       105 Oct 24 00:41 job.xml
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc      6391 Oct 24 00:41 init_data.xml
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc 229056862 Oct 24 00:41 EVNT.46771634._003417.pool.root.1
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc     15120 Oct 24 00:41 start_atlas.sh
[2025-10-24 05:18:57] drwxrwx--x. 2 boinc boinc        68 Oct 24 00:41 shared
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc    569677 Oct 24 00:41 input.tar.gz
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc         0 Oct 24 00:41 boinc_lockfile
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc      2560 Oct 24 00:41 pandaJob.out
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc    978508 Oct 24 00:45 agis_schedconf.cvmfs.json
[2025-10-24 05:18:57] drwx------. 5 boinc boinc      4096 Oct 24 00:45 pilot3
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc 207241102 Oct 24 05:14 HITS.46771637._100111.pool.root.1
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc       531 Oct 24 05:15 boinc_task_state.xml
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc      1029 Oct 24 05:16 memory_monitor_summary.json
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc   1560740 Oct 24 05:16 agis_ddmendpoints.agis.ALL.json
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc    476542 Oct 24 05:16 log.46771637._100111.job.log.tgz.1
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc      7780 Oct 24 05:17 heartbeat.json
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc        95 Oct 24 05:18 pilot_heartbeat.json
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc        28 Oct 24 05:18 wrapper_checkpoint.txt
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc      8192 Oct 24 05:18 boinc_mmap_file
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc      4884 Oct 24 05:18 pilotlog.txt
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc   2187117 Oct 24 05:18 log.46771637._100111.job.log.1
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc       357 Oct 24 05:18 output.list
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc       620 Oct 24 05:18 runtime_log
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc   2682880 Oct 24 05:18 result.tar.gz
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc       656 Oct 24 05:18 UZXMDmZM2V8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7tiMDmhvt3En.diag
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc      8717 Oct 24 05:18 runtime_log.err
[2025-10-24 05:18:57] -rw-r--r--. 1 boinc boinc     20866 Oct 24 05:18 stderr.txt
[2025-10-24 05:18:57] HITS file was successfully produced:
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc 207241102 Oct 24 05:14 shared/HITS.pool.root.1
[2025-10-24 05:18:57]  *** Contents of shared directory: ***
[2025-10-24 05:18:57] total 429272
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc 229056862 Oct 24 00:41 ATLAS.root_0
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc     15120 Oct 24 00:41 start_atlas.sh
[2025-10-24 05:18:57] -rw-r--r--. 2 boinc boinc    569677 Oct 24 00:41 input.tar.gz
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc 207241102 Oct 24 05:14 HITS.pool.root.1
[2025-10-24 05:18:57] -rw-------. 1 boinc boinc   2682880 Oct 24 05:18 result.tar.gz
05:18:59 (1856): run_atlas exited; CPU time 60504.488085
05:18:59 (1856): called boinc_finish(0)

</stderr_txt>
]]>

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