Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:42:10 (1055351): wrapper (7.7.26015): starting
05:42:10 (1055351): wrapper: running run_atlas (--nthreads 10)
[2025-10-23 05:42:10] Arguments: --nthreads 10
[2025-10-23 05:42:10] Threads: 10
[2025-10-23 05:42:10] Checking for CVMFS
[2025-10-23 05:42:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 05:42:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 05:42:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 05:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 05:42:10] 2.13.2.0 4001654 144919 466532 152032 0 529 20240740 32935936 13505 16776704 25 332484049 99.632 317574689 22343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-23 05:42:10] CVMFS is ok
[2025-10-23 05:42:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 05:42:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 05:42:10] Further information can be found at the LHC@home message board.
[2025-10-23 05:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 05:42:10] Checking for apptainer binary...
[2025-10-23 05:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 05:42:10] Running /usr/bin/apptainer --version
[2025-10-23 05:42:10] apptainer version 1.4.3-1.el9
[2025-10-23 05:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 05:42:11] c7-11-13.aglt2.org
[2025-10-23 05:42:11] apptainer works
[2025-10-23 05:42:11] Set ATHENA_PROC_NUMBER=10
[2025-10-23 05:42:11] Set ATHENA_CORE_NUMBER=10
[2025-10-23 05:42:11] Starting ATLAS job with PandaID=6853859656
[2025-10-23 05:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 07:57:47]  *** The last 200 lines of the pilot log: ***
[2025-10-23 07:57:47] 2025-10-23 11:56:51,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 07:57:47] 2025-10-23 11:56:51,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 07:57:47] 2025-10-23 11:56:51,893 | INFO     | fitting pss+swap vs Time
[2025-10-23 07:57:47] 2025-10-23 11:56:51,893 | INFO     | sum of square deviations: 697030081.7862587
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | sum of deviations: -4441855014.259541
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | mean x: 1761216576.3053436
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | mean y: 2179312.6564885494
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | -- intersect: 11225609814.55242
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | intersect: 11225609814.55242
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | chi2: 4.342201877839605
[2025-10-23 07:57:47] 2025-10-23 11:56:51,894 | INFO     | sum of square deviations: 620215922.0396802
[2025-10-23 07:57:47] 2025-10-23 11:56:51,895 | INFO     | sum of deviations: 12498129345.063492
[2025-10-23 07:57:47] 2025-10-23 11:56:51,895 | INFO     | mean x: 1761216423.8015873
[2025-10-23 07:57:47] 2025-10-23 11:56:51,895 | INFO     | mean y: 2212268.6825396824
[2025-10-23 07:57:47] 2025-10-23 11:56:51,895 | INFO     | -- intersect: -35488509409.23356
[2025-10-23 07:57:47] 2025-10-23 11:56:51,896 | INFO     | intersect: -35488509409.23356
[2025-10-23 07:57:47] 2025-10-23 11:56:51,896 | INFO     | chi2: 2.8060843375613196
[2025-10-23 07:57:47] 2025-10-23 11:56:51,896 | INFO     | current chi2=2.8060843375613196 (change=35.37646529328472 %)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,896 | INFO     | sum of square deviations: 549269779.6859484
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | sum of deviations: 12087730981.719
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | mean x: 1761216271.3057852
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | mean y: 2211342.115702479
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | -- intersect: -38756717831.71006
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | intersect: -38756717831.71006
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | chi2: 2.810594144013798
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | current chi2=2.810594144013798 (change=-0.1607152854285755 %)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,897 | INFO     | right removable region: 120
[2025-10-23 07:57:47] 2025-10-23 11:56:51,898 | INFO     | sum of square deviations: 620214885.4285711
[2025-10-23 07:57:47] 2025-10-23 11:56:51,898 | INFO     | sum of deviations: -30774313215.619064
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | mean x: 1761216728.8095238
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | mean y: 2231095.015873016
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | -- intersect: 87391677118.25943
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | intersect: 87391677118.25943
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | chi2: 1.9474840347727396
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | current chi2=1.9474840347727396 (change=55.14985047766411 %)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,899 | INFO     | sum of square deviations: 549252822.4297504
[2025-10-23 07:57:47] 2025-10-23 11:56:51,900 | INFO     | sum of deviations: -28008920026.272728
[2025-10-23 07:57:47] 2025-10-23 11:56:51,900 | INFO     | mean x: 1761216881.322314
[2025-10-23 07:57:47] 2025-10-23 11:56:51,900 | INFO     | mean y: 2224992.5454545454
[2025-10-23 07:57:47] 2025-10-23 11:56:51,900 | INFO     | -- intersect: 89814749868.89682
[2025-10-23 07:57:47] 2025-10-23 11:56:51,900 | INFO     | intersect: 89814749868.89682
[2025-10-23 07:57:47] 2025-10-23 11:56:51,901 | INFO     | chi2: 1.9180077533344293
[2025-10-23 07:57:47] 2025-10-23 11:56:51,901 | INFO     | current chi2=1.9180077533344293 (change=1.5135570259886617 %)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,901 | INFO     | left removable region: 20
[2025-10-23 07:57:47] 2025-10-23 11:56:51,901 | INFO     | sum of square deviations: 309999350.75000066
[2025-10-23 07:57:47] 2025-10-23 11:56:51,901 | INFO     | sum of deviations: -684780210.2000005
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | mean x: 1761216850.85
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | mean y: 2232664.12
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | -- intersect: 3892713216.4662647
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | intersect: 3892713216.4662647
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | chi2: 0.11347103866374197
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | -- intersect: 3892713216.4662647
[2025-10-23 07:57:47] 2025-10-23 11:56:51,902 | INFO     | current memory leak: -2.21 B/s (using 100 data points, chi2=0.11)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | could have reported an average CPU frequency of 3281 MHz (8 samples)
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | ..............................
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . Timing measurements:
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . get job = 0 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . initial setup = 3 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . payload setup = 18 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . stage-in = 0 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,903 | INFO     | . payload execution = 7966 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,904 | INFO     | . stage-out = 2 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,904 | INFO     | . log creation = 0 s
[2025-10-23 07:57:47] 2025-10-23 11:56:51,904 | INFO     | ..............................
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | 
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | job summary report
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | --------------------------------------------------
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | PanDA job id: 6853859656
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | task id: 46771637
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | errors: (none)
[2025-10-23 07:57:47] 2025-10-23 11:56:52,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | pilot state: finished 
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | transexitcode: 0
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | exeerrorcode: 0
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | exeerrordiag: 
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | exitcode: 0
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | exitmsg: OK
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | cpuconsumptiontime: 34491 s
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | nevents: 400
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | neventsw: 0
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | pid: 1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | pgrp: 1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | corecount: 10
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | event service: False
[2025-10-23 07:57:47] 2025-10-23 11:56:52,213 | INFO     | sizes: {0: 2348704, 1: 2348959, 8: 2349221, 12: 2349249, 7990: 2377074, 7994: 2386072, 7997: 2386256, 8046: 2386450}
[2025-10-23 07:57:47] 2025-10-23 11:56:52,219 | INFO     | --------------------------------------------------
[2025-10-23 07:57:47] 2025-10-23 11:56:52,219 | INFO     | 
[2025-10-23 07:57:47] 2025-10-23 11:56:52,219 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 07:57:47] 2025-10-23 11:56:52,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 07:57:47] 2025-10-23 11:56:52,333 | INFO     | job 6853859656 has completed (purged errors)
[2025-10-23 07:57:47] 2025-10-23 11:56:52,333 | INFO     | overall cleanup function is called
[2025-10-23 07:57:47] 2025-10-23 11:56:53,345 | INFO     | --- collectZombieJob: --- 10, [1066869]
[2025-10-23 07:57:47] 2025-10-23 11:56:53,345 | INFO     | zombie collector waiting for pid 1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:53,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 07:57:47] 2025-10-23 11:56:53,345 | INFO     | collected zombie processes
[2025-10-23 07:57:47] 2025-10-23 11:56:53,345 | INFO     | will attempt to kill all subprocesses of pid=1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:53,986 | INFO     | process IDs to be killed: [1066869] (in reverse order)
[2025-10-23 07:57:47] 2025-10-23 11:56:54,196 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 07:57:47] 2025-10-23 11:56:54,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 07:57:47] 2025-10-23 11:56:54,229 | INFO     | did not find any defunct processes belonging to 1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:54,250 | INFO     | did not find any defunct processes belonging to 1066869
[2025-10-23 07:57:47] 2025-10-23 11:56:54,250 | INFO     | ready for new job
[2025-10-23 07:57:47] 2025-10-23 11:56:54,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 07:57:47] 2025-10-23 11:56:54,256 | INFO     | ***************************************
[2025-10-23 07:57:47] 2025-10-23 11:56:54,256 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 07:57:47] 2025-10-23 11:56:54,256 | INFO     | ***************************************
[2025-10-23 07:57:47] 2025-10-23 11:56:54,256 | INFO     | 
[2025-10-23 07:57:47] 2025-10-23 11:56:54,274 | INFO     | architecture information:
[2025-10-23 07:57:47] 2025-10-23 11:56:54,287 | INFO     | executing command: cat /etc/os-release
[2025-10-23 07:57:47] 2025-10-23 11:56:54,313 | INFO     | cat /etc/os-release:
[2025-10-23 07:57:47] NAME="CentOS Linux"
[2025-10-23 07:57:47] VERSION="7 (Core)"
[2025-10-23 07:57:47] ID="centos"
[2025-10-23 07:57:47] ID_LIKE="rhel fedora"
[2025-10-23 07:57:47] VERSION_ID="7"
[2025-10-23 07:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 07:57:47] ANSI_COLOR="0;31"
[2025-10-23 07:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 07:57:47] HOME_URL="https://www.centos.org/"
[2025-10-23 07:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 07:57:47] 
[2025-10-23 07:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 07:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 07:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 07:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 07:57:47] 
[2025-10-23 07:57:47] 2025-10-23 11:56:54,318 | INFO     | ***************************************
[2025-10-23 07:57:47] 2025-10-23 11:56:54,822 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-23 07:57:47] 2025-10-23 11:56:55,018 | INFO     | sufficient remaining disk space (94296342528 B)
[2025-10-23 07:57:47] 2025-10-23 11:56:55,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 07:57:47] 2025-10-23 11:56:55,019 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 07:57:47] 2025-10-23 11:56:55,019 | INFO     | update_server=False
[2025-10-23 07:57:47] 2025-10-23 11:56:55,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 07:57:47] 2025-10-23 11:56:55,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 07:57:47] 2025-10-23 11:56:55,195 | INFO     | all data control threads have been joined
[2025-10-23 07:57:47] 2025-10-23 11:56:55,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 07:57:47] 2025-10-23 11:56:55,408 | INFO     | all payload control threads have been joined
[2025-10-23 07:57:47] 2025-10-23 11:56:55,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 07:57:47] 2025-10-23 11:56:55,532 | INFO     | aborting loop
[2025-10-23 07:57:47] 2025-10-23 11:56:55,614 | INFO     | all job control threads have been joined
[2025-10-23 07:57:47] 2025-10-23 11:56:56,025 | INFO     | [job] retrieve thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,201 | INFO     | [data] control thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,221 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,413 | INFO     | [payload] control thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,419 | INFO     | [payload] validate_post thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,448 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,537 | INFO     | [job] job monitor thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,620 | INFO     | [job] control thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,759 | INFO     | [data] copytool_in thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,856 | INFO     | [payload] failed_post thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:56,889 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:57,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 07:57:47] 2025-10-23 11:56:57,074 | INFO     | [job] validate thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:57,283 | INFO     | [data] copytool_out thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:58,020 | INFO     | [job] queue monitor thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:56:59,033 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 07:57:47] 2025-10-23 11:57:24,022 | INFO     | PID=1059200 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 07:57:47] 2025-10-23 11:57:24,027 | INFO     | .. there are 14 such processes running
[2025-10-23 07:57:47] 2025-10-23 11:57:24,028 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 07:57:47] 2025-10-23 11:57:24,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 07:57:47] 2025-10-23 11:57:24,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 07:57:47] 2025-10-23 11:57:24,998 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-23 07:57:47] 2025-10-23 11:57:40,512 | INFO     | [monitor] cgroup control has ended
[2025-10-23 07:57:47] 2025-10-23 11:57:40,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419851003712)>', '<ExcThread(monitor, started 140419367159552)>']
[2025-10-23 07:57:47] 2025-10-23 11:57:41,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 07:57:47] 2025-10-23 11:57:41,139 | INFO     | [monitor] control thread has ended
[2025-10-23 07:57:47] 2025-10-23 11:57:45,843 | INFO     | all workflow threads have been joined
[2025-10-23 07:57:47] 2025-10-23 11:57:45,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 07:57:47] 2025-10-23 11:57:45,845 | INFO     | traces error code: 0
[2025-10-23 07:57:47] 2025-10-23 11:57:45,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 07:57:47] 2025-10-23 11:57:46,199 [wrapper] ==== pilot stdout END ====
[2025-10-23 07:57:47] 2025-10-23 11:57:46,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 07:57:47] 2025-10-23 11:57:46,243 [wrapper] pilotpid: 1059200
[2025-10-23 07:57:47] 2025-10-23 11:57:46,312 [wrapper] Pilot exit status: 0
[2025-10-23 07:57:47] 2025-10-23 11:57:46,466 [wrapper] pandaids: 6853859656
[2025-10-23 07:57:47] 2025-10-23 11:57:46,720 [wrapper] cleanup supervisor_pilot 1577651 1059201
[2025-10-23 07:57:47] 2025-10-23 11:57:46,759 [wrapper] Test setup, not cleaning
[2025-10-23 07:57:47] 2025-10-23 11:57:46,816 [wrapper] apfmon messages muted
[2025-10-23 07:57:47] 2025-10-23 11:57:46,844 [wrapper] ==== wrapper stdout END ====
[2025-10-23 07:57:47] 2025-10-23 11:57:46,901 [wrapper] ==== wrapper stderr END ====
[2025-10-23 07:57:47]  *** Error codes and diagnostics ***
[2025-10-23 07:57:47]     "exeErrorCode": 0,
[2025-10-23 07:57:47]     "exeErrorDiag": "",
[2025-10-23 07:57:47]     "pilotErrorCode": 0,
[2025-10-23 07:57:47]     "pilotErrorDiag": "",
[2025-10-23 07:57:47]  *** Listing of results directory ***
[2025-10-23 07:57:47] total 423328
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 17:01 pilot3.tar.gz
[2025-10-23 07:57:47] -rwx------. 1 boincer umatlas     36292 Oct 22 17:21 runpilot2-wrapper.sh
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 17:21 queuedata.json
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas       100 Oct 23 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 07:57:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 05:42 run_atlas
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas       105 Oct 23 05:42 job.xml
[2025-10-23 07:57:47] -rw-r--r--. 2 boincer umatlas 225026606 Oct 23 05:42 EVNT.46771634._003819.pool.root.1
[2025-10-23 07:57:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 05:42 start_atlas.sh
[2025-10-23 07:57:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 23 05:42 shared
[2025-10-23 07:57:47] -rw-r--r--. 2 boincer umatlas    569673 Oct 23 05:42 input.tar.gz
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas         0 Oct 23 05:42 boinc_lockfile
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas      2560 Oct 23 05:42 pandaJob.out
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas    978119 Oct 23 05:42 agis_schedconf.cvmfs.json
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas   1560740 Oct 23 05:42 agis_ddmendpoints.agis.ALL.json
[2025-10-23 07:57:47] drwx------. 5 boincer umatlas      4096 Oct 23 05:42 pilot3
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas 201556801 Oct 23 07:54 HITS.46771637._093869.pool.root.1
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas       530 Oct 23 07:54 boinc_task_state.xml
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas      6898 Oct 23 07:54 init_data.xml
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas      1031 Oct 23 07:55 memory_monitor_summary.json
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas    393599 Oct 23 07:55 log.46771637._093869.job.log.tgz.1
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas      7775 Oct 23 07:56 heartbeat.json
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas        95 Oct 23 07:57 pilot_heartbeat.json
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 07:57 boinc_mmap_file
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas        27 Oct 23 07:57 wrapper_checkpoint.txt
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas      4824 Oct 23 07:57 pilotlog.txt
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas   1104811 Oct 23 07:57 log.46771637._093869.job.log.1
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas       357 Oct 23 07:57 output.list
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas       620 Oct 23 07:57 runtime_log
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas   1515520 Oct 23 07:57 result.tar.gz
[2025-10-23 07:57:47] -rw-------. 1 boincer umatlas       652 Oct 23 07:57 tg8KDmnRvV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqo6NDms2lkTm.diag
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas      8705 Oct 23 07:57 runtime_log.err
[2025-10-23 07:57:47] -rw-r--r--. 1 boincer umatlas     20975 Oct 23 07:57 stderr.txt
[2025-10-23 07:57:48] HITS file was successfully produced:
[2025-10-23 07:57:48] -rw-------. 1 boincer umatlas 201556801 Oct 23 07:54 shared/HITS.pool.root.1
[2025-10-23 07:57:48]  *** Contents of shared directory: ***
[2025-10-23 07:57:48] total 418656
[2025-10-23 07:57:48] -rw-r--r--. 2 boincer umatlas 225026606 Oct 23 05:42 ATLAS.root_0
[2025-10-23 07:57:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 05:42 start_atlas.sh
[2025-10-23 07:57:48] -rw-r--r--. 2 boincer umatlas    569673 Oct 23 05:42 input.tar.gz
[2025-10-23 07:57:48] -rw-------. 1 boincer umatlas 201556801 Oct 23 07:54 HITS.pool.root.1
[2025-10-23 07:57:48] -rw-------. 1 boincer umatlas   1515520 Oct 23 07:57 result.tar.gz
07:58:10 (1055351): run_atlas exited; CPU time 34549.127579
07:58:10 (1055351): called boinc_finish(0)

</stderr_txt>
]]>

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