Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:36:49 (1781064): wrapper (7.7.26015): starting
07:36:49 (1781064): wrapper: running run_atlas (--nthreads 4)
[2025-10-23 07:36:49] Arguments: --nthreads 4
[2025-10-23 07:36:49] Threads: 4
[2025-10-23 07:36:49] Checking for CVMFS
[2025-10-23 07:36:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 07:36:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 07:36:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 07:36:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 07:36:49] 2.11.0.0 5866 3421 117256 152030 2 57 2500686 4096001 6454 130560 0 16597215 99.998 125191 1316 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-23 07:36:49] CVMFS is ok
[2025-10-23 07:36:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 07:36:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-23 07:36:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-23 07:36:49] Further information can be found at the LHC@home message board.
[2025-10-23 07:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 07:36:49] Checking for apptainer binary...
[2025-10-23 07:36:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 07:36:49] Running /usr/bin/apptainer --version
[2025-10-23 07:36:49] apptainer version 1.4.3
[2025-10-23 07:36:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 07:36:50] x32-linux2
[2025-10-23 07:36:50] apptainer works
[2025-10-23 07:36:50] Set ATHENA_PROC_NUMBER=4
[2025-10-23 07:36:50] Set ATHENA_CORE_NUMBER=4
[2025-10-23 07:36:50] Starting ATLAS job with PandaID=6855461204
[2025-10-23 07:36:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 09:10:13]  *** The last 200 lines of the pilot log: ***
[2025-10-23 09:10:13]  scope=mc23_13p6TeV
[2025-10-23 09:10:13]  status=None
[2025-10-23 09:10:13]  status_code=0
[2025-10-23 09:10:13]  storage_token=
[2025-10-23 09:10:13]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6855461204/log.46809188._006901.job.log.tgz.1
[2025-10-23 09:10:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/b3/log.46809188._006901.job.log.tgz.1
[2025-10-23 09:10:13]  workdir=None
[2025-10-23 09:10:13] ]
[2025-10-23 09:10:13] 2025-10-23 13:09:17,677 | INFO     | transferring file log.46809188._006901.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6855461204/log.46809188._006901.job.log.tgz.1 to /var/lib/boinc
[2025-10-23 09:10:13] 2025-10-23 13:09:17,677 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6855461204/log.46809188._006901.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.468091
[2025-10-23 09:10:13] 2025-10-23 13:09:17,694 | INFO     | adding to output.list: log.46809188._006901.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/b3/log.46809188._006901.job.log.tg
[2025-10-23 09:10:13] 2025-10-23 13:09:17,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 09:10:13] 2025-10-23 13:09:17,695 | INFO     | summary of transferred files:
[2025-10-23 09:10:13] 2025-10-23 13:09:17,695 | INFO     |  -- lfn=log.46809188._006901.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 09:10:13] 2025-10-23 13:09:17,695 | INFO     | stage-out finished correctly
[2025-10-23 09:10:13] 2025-10-23 13:09:18,237 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 09:10:13] 2025-10-23 13:09:19,155 | INFO     | time since job start (5541s) is within the limit (172800.0s)
[2025-10-23 09:10:13] 2025-10-23 13:09:19,796 | INFO     | job 6855461204 has state=finished
[2025-10-23 09:10:13] 2025-10-23 13:09:19,796 | INFO     | preparing for final server update for job 6855461204 in state='finished'
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | this job has now completed (state=finished)
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | log transfer has been attempted: DONE
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | job 6855461204 has finished - writing final server update
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | total number of processed events: 400 (read)
[2025-10-23 09:10:13] 2025-10-23 13:09:19,797 | INFO     | executing command: lscpu
[2025-10-23 09:10:13] 2025-10-23 13:09:19,824 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 09:10:13] 2025-10-23 13:09:19,993 | INFO     | monitor loop #417: job 0:6855461204 is in state 'finished'
[2025-10-23 09:10:13] 2025-10-23 13:09:19,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:10:13] 2025-10-23 13:09:20,331 | INFO     | PID=1784904 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 09:10:13] 2025-10-23 13:09:20,331 | INFO     | .. there are 8 such processes running
[2025-10-23 09:10:13] 2025-10-23 13:09:21,332 | INFO     | time since job start (5543s) is within the limit (172800.0s)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,496 | INFO     | monitor loop #418: job 0:6855461204 is in state 'finished'
[2025-10-23 09:10:13] 2025-10-23 13:09:22,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,644 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 09:10:13] 2025-10-23 13:09:22,648 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3805.3419687499995
[2025-10-23 09:10:13] 2025-10-23 13:09:22,652 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6855461204/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,653 | INFO     | extracted standard info from prmon json
[2025-10-23 09:10:13] 2025-10-23 13:09:22,653 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 09:10:13] 2025-10-23 13:09:22,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 09:10:13] 2025-10-23 13:09:22,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 09:10:13] 2025-10-23 13:09:22,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 09:10:13] 2025-10-23 13:09:22,654 | INFO     | fitting pss+swap vs Time
[2025-10-23 09:10:13] 2025-10-23 13:09:22,654 | INFO     | sum of square deviations: 183761585.0
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | sum of deviations: -13906187842.500002
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | mean x: 1761222276.5
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | mean y: 2408511.345238095
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | -- intersect: 133283190832.65836
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | intersect: 133283190832.65836
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | chi2: 0.06700001465786377
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | -- intersect: 133283190832.65836
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | current memory leak: -75.68 B/s (using 84 data points, chi2=0.07)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | could have reported an average CPU frequency of 3850 MHz (7 samples)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | ..............................
[2025-10-23 09:10:13] 2025-10-23 13:09:22,655 | INFO     | . Timing measurements:
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . get job = 0 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . initial setup = 2 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . payload setup = 3 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . stage-in = 0 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . payload execution = 5517 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . stage-out = 0 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | . log creation = 0 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,656 | INFO     | ..............................
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | 
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | job summary report
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | --------------------------------------------------
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | PanDA job id: 6855461204
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | task id: 46809188
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | errors: (none)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | pilot state: finished 
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | transexitcode: 0
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | exeerrorcode: 0
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | exeerrordiag: 
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | exitcode: 0
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | exitmsg: OK
[2025-10-23 09:10:13] 2025-10-23 13:09:22,920 | INFO     | cpuconsumptiontime: 21006 s
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | nevents: 400
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | neventsw: 0
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | pid: 1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | pgrp: 1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | corecount: 4
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | event service: False
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | sizes: {0: 2348845, 3: 2349107, 11: 2349135, 5525: 2384835, 5526: 2384835, 5530: 2385029}
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | --------------------------------------------------
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | 
[2025-10-23 09:10:13] 2025-10-23 13:09:22,921 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-10-23 09:10:13] 2025-10-23 13:09:22,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 09:10:13] 2025-10-23 13:09:22,937 | INFO     | job 6855461204 has completed (purged errors)
[2025-10-23 09:10:13] 2025-10-23 13:09:22,938 | INFO     | overall cleanup function is called
[2025-10-23 09:10:13] 2025-10-23 13:09:23,944 | INFO     | --- collectZombieJob: --- 10, [1791546]
[2025-10-23 09:10:13] 2025-10-23 13:09:23,944 | INFO     | zombie collector waiting for pid 1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:23,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 09:10:13] 2025-10-23 13:09:23,944 | INFO     | collected zombie processes
[2025-10-23 09:10:13] 2025-10-23 13:09:23,944 | INFO     | will attempt to kill all subprocesses of pid=1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:24,080 | INFO     | process IDs to be killed: [1791546] (in reverse order)
[2025-10-23 09:10:13] 2025-10-23 13:09:24,134 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 09:10:13] 2025-10-23 13:09:24,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 09:10:13] 2025-10-23 13:09:24,137 | INFO     | did not find any defunct processes belonging to 1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:24,139 | INFO     | did not find any defunct processes belonging to 1791546
[2025-10-23 09:10:13] 2025-10-23 13:09:24,139 | INFO     | ready for new job
[2025-10-23 09:10:13] 2025-10-23 13:09:24,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 09:10:13] 2025-10-23 13:09:24,140 | INFO     | ***************************************
[2025-10-23 09:10:13] 2025-10-23 13:09:24,140 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 09:10:13] 2025-10-23 13:09:24,140 | INFO     | ***************************************
[2025-10-23 09:10:13] 2025-10-23 13:09:24,140 | INFO     | 
[2025-10-23 09:10:13] 2025-10-23 13:09:24,141 | INFO     | architecture information:
[2025-10-23 09:10:13] 2025-10-23 13:09:24,141 | INFO     | executing command: cat /etc/os-release
[2025-10-23 09:10:13] 2025-10-23 13:09:24,148 | INFO     | cat /etc/os-release:
[2025-10-23 09:10:13] NAME="CentOS Linux"
[2025-10-23 09:10:13] VERSION="7 (Core)"
[2025-10-23 09:10:13] ID="centos"
[2025-10-23 09:10:13] ID_LIKE="rhel fedora"
[2025-10-23 09:10:13] VERSION_ID="7"
[2025-10-23 09:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 09:10:13] ANSI_COLOR="0;31"
[2025-10-23 09:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 09:10:13] HOME_URL="https://www.centos.org/"
[2025-10-23 09:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 09:10:13] 
[2025-10-23 09:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 09:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 09:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 09:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 09:10:13] 
[2025-10-23 09:10:13] 2025-10-23 13:09:24,149 | INFO     | ***************************************
[2025-10-23 09:10:13] 2025-10-23 13:09:24,651 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-10-23 09:10:13] 2025-10-23 13:09:24,664 | INFO     | sufficient remaining disk space (413880287232 B)
[2025-10-23 09:10:13] 2025-10-23 13:09:24,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 09:10:13] 2025-10-23 13:09:24,664 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 09:10:13] 2025-10-23 13:09:24,664 | INFO     | update_server=False
[2025-10-23 09:10:13] 2025-10-23 13:09:24,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 09:10:13] 2025-10-23 13:09:24,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 09:10:13] 2025-10-23 13:09:24,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 09:10:13] 2025-10-23 13:09:24,882 | INFO     | all data control threads have been joined
[2025-10-23 09:10:13] 2025-10-23 13:09:24,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-23 09:10:13] 2025-10-23 13:09:24,999 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-23 09:10:13] 2025-10-23 13:09:24,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 09:10:13] 2025-10-23 13:09:24,999 | INFO     | will abort loop
[2025-10-23 09:10:13] 2025-10-23 13:09:25,673 | INFO     | [job] retrieve thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,673 | INFO     | [job] queue monitor thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,675 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,675 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 09:10:13] 2025-10-23 13:09:25,819 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,887 | INFO     | [data] control thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,915 | INFO     | [data] copytool_in thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:25,961 | INFO     | all payload control threads have been joined
[2025-10-23 09:10:13] 2025-10-23 13:09:26,004 | INFO     | [job] job monitor thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:26,235 | INFO     | [payload] validate_post thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:26,244 | INFO     | all job control threads have been joined
[2025-10-23 09:10:13] 2025-10-23 13:09:26,966 | INFO     | [payload] control thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:27,088 | INFO     | [job] validate thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:27,154 | INFO     | [payload] failed_post thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:27,249 | INFO     | [job] control thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:27,780 | INFO     | [data] copytool_out thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:28,670 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:34,816 | INFO     | job.realtimelogging is not enabled
[2025-10-23 09:10:13] 2025-10-23 13:09:35,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 09:10:13] 2025-10-23 13:09:54,567 | INFO     | PID=1784904 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 09:10:13] 2025-10-23 13:09:54,567 | INFO     | .. there are 8 such processes running
[2025-10-23 09:10:13] 2025-10-23 13:09:54,567 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 09:10:13] 2025-10-23 13:09:54,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 09:10:13] 2025-10-23 13:09:54,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 09:10:13] 2025-10-23 13:10:06,753 | INFO     | [monitor] cgroup control has ended
[2025-10-23 09:10:13] 2025-10-23 13:10:08,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134703692461888)>', '<ExcThread(monitor, started 134703025731328)>']
[2025-10-23 09:10:13] 2025-10-23 13:10:08,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 09:10:13] 2025-10-23 13:10:08,621 | INFO     | [monitor] control thread has ended
[2025-10-23 09:10:13] 2025-10-23 13:10:13,592 | INFO     | all workflow threads have been joined
[2025-10-23 09:10:13] 2025-10-23 13:10:13,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 09:10:13] 2025-10-23 13:10:13,592 | INFO     | traces error code: 0
[2025-10-23 09:10:13] 2025-10-23 13:10:13,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 09:10:13] 2025-10-23 13:10:13,660 [wrapper] ==== pilot stdout END ====
[2025-10-23 09:10:13] 2025-10-23 13:10:13,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 09:10:13] 2025-10-23 13:10:13,664 [wrapper] pilotpid: 1784904
[2025-10-23 09:10:13] 2025-10-23 13:10:13,666 [wrapper] Pilot exit status: 0
[2025-10-23 09:10:13] 2025-10-23 13:10:13,673 [wrapper] pandaids: 6855461204
[2025-10-23 09:10:13] 2025-10-23 13:10:13,710 [wrapper] cleanup supervisor_pilot 1979602 1784905
[2025-10-23 09:10:13] 2025-10-23 13:10:13,712 [wrapper] Test setup, not cleaning
[2025-10-23 09:10:13] 2025-10-23 13:10:13,714 [wrapper] apfmon messages muted
[2025-10-23 09:10:13] 2025-10-23 13:10:13,716 [wrapper] ==== wrapper stdout END ====
[2025-10-23 09:10:13] 2025-10-23 13:10:13,718 [wrapper] ==== wrapper stderr END ====
[2025-10-23 09:10:13]  *** Error codes and diagnostics ***
[2025-10-23 09:10:13]     "exeErrorCode": 0,
[2025-10-23 09:10:13]     "exeErrorDiag": "",
[2025-10-23 09:10:13]     "pilotErrorCode": 0,
[2025-10-23 09:10:13]     "pilotErrorDiag": "",
[2025-10-23 09:10:13]  *** Listing of results directory ***
[2025-10-23 09:10:13] total 337172
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc    557409 Oct 22 12:51 pilot3.tar.gz
[2025-10-23 09:10:13] -rwx------ 1 boinc boinc     36292 Oct 22 13:01 runpilot2-wrapper.sh
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc      5112 Oct 22 13:01 queuedata.json
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc       100 Oct 23 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 09:10:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 23 07:36 run_atlas
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc       105 Oct 23 07:36 job.xml
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc 190281908 Oct 23 07:36 EVNT.46809186._000263.pool.root.1
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc     15120 Oct 23 07:36 start_atlas.sh
[2025-10-23 09:10:13] drwxrwx--x 2 boinc boinc      4096 Oct 23 07:36 shared
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc    569672 Oct 23 07:36 input.tar.gz
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc      9234 Oct 23 07:36 init_data.xml
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc         0 Oct 23 07:36 boinc_setup_complete
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc         0 Oct 23 07:36 boinc_lockfile
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc      2492 Oct 23 07:36 pandaJob.out
[2025-10-23 09:10:13] -rw------- 1 boinc boinc    978111 Oct 23 07:36 agis_schedconf.cvmfs.json
[2025-10-23 09:10:13] -rw------- 1 boinc boinc   1560740 Oct 23 07:36 agis_ddmendpoints.agis.ALL.json
[2025-10-23 09:10:13] drwx------ 5 boinc boinc      4096 Oct 23 07:36 pilot3
[2025-10-23 09:10:13] -rw------- 1 boinc boinc 148871364 Oct 23 09:08 HITS.46809188._006901.pool.root.1
[2025-10-23 09:10:13] -rw------- 1 boinc boinc        95 Oct 23 09:09 pilot_heartbeat.json
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc       530 Oct 23 09:09 boinc_task_state.xml
[2025-10-23 09:10:13] -rw------- 1 boinc boinc      1024 Oct 23 09:09 memory_monitor_summary.json
[2025-10-23 09:10:13] -rw------- 1 boinc boinc    275142 Oct 23 09:09 log.46809188._006901.job.log.tgz.1
[2025-10-23 09:10:13] -rw------- 1 boinc boinc      7740 Oct 23 09:09 heartbeat.json
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc      8192 Oct 23 09:10 boinc_mmap_file
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc        27 Oct 23 09:10 wrapper_checkpoint.txt
[2025-10-23 09:10:13] -rw------- 1 boinc boinc      5089 Oct 23 09:10 pilotlog.txt
[2025-10-23 09:10:13] -rw------- 1 boinc boinc    823986 Oct 23 09:10 log.46809188._006901.job.log.1
[2025-10-23 09:10:13] -rw------- 1 boinc boinc       357 Oct 23 09:10 output.list
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc       620 Oct 23 09:10 runtime_log
[2025-10-23 09:10:13] -rw------- 1 boinc boinc   1116160 Oct 23 09:10 result.tar.gz
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc      8764 Oct 23 09:10 runtime_log.err
[2025-10-23 09:10:13] -rw------- 1 boinc boinc       643 Oct 23 09:10 70SKDm3NrV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmithMDmzcjBjn.diag
[2025-10-23 09:10:13] -rw-r--r-- 1 boinc boinc     22029 Oct 23 09:10 stderr.txt
[2025-10-23 09:10:13] HITS file was successfully produced:
[2025-10-23 09:10:13] -rw------- 1 boinc boinc 148871364 Oct 23 09:08 shared/HITS.pool.root.1
[2025-10-23 09:10:13]  *** Contents of shared directory: ***
[2025-10-23 09:10:13] total 332884
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc 190281908 Oct 23 07:36 ATLAS.root_0
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc     15120 Oct 23 07:36 start_atlas.sh
[2025-10-23 09:10:13] -rw-r--r-- 2 boinc boinc    569672 Oct 23 07:36 input.tar.gz
[2025-10-23 09:10:13] -rw------- 1 boinc boinc 148871364 Oct 23 09:08 HITS.pool.root.1
[2025-10-23 09:10:13] -rw------- 1 boinc boinc   1116160 Oct 23 09:10 result.tar.gz
09:10:14 (1781064): run_atlas exited; CPU time 21074.515498
09:10:14 (1781064): called boinc_finish(0)

</stderr_txt>
]]>

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