Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-25 00:53:33 (8668): vboxwrapper version 26210
2025-10-25 00:53:33 (8668): BOINC client version: 8.0.2
2025-10-25 00:53:33 (8668): Detected: VirtualBox VboxManage Interface (Version: 5.2.8)
2025-10-25 00:53:34 (8668): Successfully copied 'init_data.xml' to the shared directory.
2025-10-25 00:53:34 (8668): Create VM. (boinc_ddc2dc7a8ed04eaf, slot#0)
2025-10-25 00:53:34 (8668): Setting Memory Size for VM. (4400MB)
2025-10-25 00:53:35 (8668): Setting CPU Count for VM. (4)
2025-10-25 00:53:35 (8668): Setting Chipset Options for VM.
2025-10-25 00:53:35 (8668): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-25 00:53:35 (8668): Setting Boot Options for VM.
2025-10-25 00:53:36 (8668): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-25 00:53:36 (8668): Enabling VM Network Access.
2025-10-25 00:53:36 (8668): Disabling USB Support for VM.
2025-10-25 00:53:37 (8668): Disabling COM Port Support for VM.
2025-10-25 00:53:37 (8668): Disabling LPT Port Support for VM.
2025-10-25 00:53:37 (8668): Disabling Audio Support for VM.
2025-10-25 00:53:37 (8668): Disabling Clipboard Support for VM.
2025-10-25 00:53:38 (8668): Disabling Drag and Drop Support for VM.
2025-10-25 00:53:38 (8668): Adding storage controller(s) to VM.
2025-10-25 00:53:38 (8668): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-25 00:53:39 (8668): Adding VirtualBox Guest Additions to VM.
2025-10-25 00:53:39 (8668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-25 00:53:40 (8668): forwarding host port 51445 to guest port 80
2025-10-25 00:53:40 (8668): Enabling remote desktop for VM.
2025-10-25 00:53:40 (8668): Required extension pack not installed, remote desktop not enabled.
2025-10-25 00:53:40 (8668): Enabling shared directory for VM.
2025-10-25 00:53:41 (8668): Starting VM using VBoxManage interface. (boinc_ddc2dc7a8ed04eaf, slot#0)
2025-10-25 00:53:44 (8668): Successfully started VM. (PID = '3344')
2025-10-25 00:53:44 (8668): Reporting VM Process ID to BOINC.
2025-10-25 00:53:44 (8668): Guest Log: BIOS: VirtualBox 5.2.8
2025-10-25 00:53:44 (8668): Guest Log: CPUID EDX: 0x178bfbff
2025-10-25 00:53:44 (8668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-25 00:53:44 (8668): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-25 00:53:44 (8668): Detected: Web Application Enabled (http://localhost:51445)
2025-10-25 00:53:44 (8668): Preference change detected
2025-10-25 00:53:44 (8668): Setting CPU throttle for VM. (85%)
2025-10-25 00:53:44 (8668): Setting network throttle for VM. (512KB)
2025-10-25 00:53:44 (8668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-25 00:53:46 (8668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-25 00:53:46 (8668): Guest Log: BIOS: Booting from Hard Disk...
2025-10-25 00:53:49 (8668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-25 00:53:49 (8668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-25 00:53:49 (8668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-25 00:53:53 (8668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-25 00:53:53 (8668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-25 00:53:57 (8668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000122 main     Log opened 2025-10-25T00:53:55.098126000Z
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000185 main     OS Product: Linux
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000209 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000258 main     Process ID: 1309
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.001008 main     5.2.32 r132073 started. Verbose level = 0
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.001534 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.001619 main     Session 0 is about to close ...
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.001640 main     Stopping all guest processes ...
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.001657 main     Closing all guest files ...
2025-10-25 00:53:57 (8668): Guest Log: 00:00:00.002040 main     Ended.
2025-10-25 00:53:57 (8668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-25 00:53:57 (8668): Guest Log: [INFO] Mounting shared directory
2025-10-25 00:53:57 (8668): Guest Log: [INFO] Checking for init_data.xml
2025-10-25 00:54:02 (8668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-25 00:54:02 (8668): Guest Log: [INFO] Detected branch: prod
2025-10-25 00:54:03 (8668): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-25 00:54:03 (8668): Guest Log: Copying input files
2025-10-25 00:54:04 (8668): Guest Log: Copied input files into RunAtlas.
2025-10-25 00:54:04 (8668): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-25 00:54:04 (8668): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-25 00:54:04 (8668): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-25 00:54:04 (8668): Guest Log: Further information can be found at the LHC@home message board.
2025-10-25 00:54:12 (8668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-25 00:54:13 (8668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-25 00:54:13 (8668): Guest Log: 2.6.3.0 1579 0 32196 152099 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-25 00:54:13 (8668): Guest Log: copied the webapp to /var/www
2025-10-25 00:54:13 (8668): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-25 00:54:13 (8668): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-25 00:54:14 (8668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-25 00:54:14 (8668): Guest Log:  *** Starting ATLAS job. (PandaID=6853744406 taskID=46771637) ***
2025-10-25 02:34:05 (8668): Status Report: Elapsed Time: '6000.000000'
2025-10-25 02:34:05 (8668): Status Report: CPU Time: '20041.963273'
2025-10-25 02:34:05 (8668): Status Report: Network Bytes Sent (Total): '2540184.000000'
2025-10-25 02:34:05 (8668): Status Report: Network Bytes Received (Total): '292388157.000000'
2025-10-25 03:06:53 (8668): Guest Log:  *** Job finished ***
2025-10-25 03:06:53 (8668): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:45,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:45,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:47,426 | INFO     | [monitor] cgroup control has ended
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:47,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655465432896)>', '<ExcThread(monitor, started 140655170922240)>']
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:47,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:47,939 | INFO     | [monitor] control thread has ended
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,684 | INFO     | all workflow threads have been joined
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,685 | INFO     | end of generic workflow (traces error code: 0)
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,685 | INFO     | traces error code: 0
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,763 [wrapper] ==== pilot stdout END ====
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,766 [wrapper] ==== wrapper stdout RESUME ====
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,769 [wrapper] pilotpid: 5992
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,773 [wrapper] Pilot exit status: 0
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:52,976 [wrapper] pandaids: 6853744406
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:53,001 [wrapper] cleanup supervisor_pilot  4938 5993
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:53,004 [wrapper] Test setup, not cleaning
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:53,008 [wrapper] apfmon messages muted
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:53,011 [wrapper] ==== wrapper stdout END ====
2025-10-25 03:06:53 (8668): Guest Log: 2025-10-25 03:06:53,015 [wrapper] ==== wrapper stderr END ====
2025-10-25 03:06:53 (8668): Guest Log:  *** Error codes and diagnostics ***
2025-10-25 03:06:53 (8668): Guest Log:     "exeErrorCode": 0,
2025-10-25 03:06:53 (8668): Guest Log:     "exeErrorDiag": "",
2025-10-25 03:06:53 (8668): Guest Log:     "pilotErrorCode": 0,
2025-10-25 03:06:53 (8668): Guest Log:     "pilotErrorDiag": "",
2025-10-25 03:06:53 (8668): Guest Log:  *** Listing of results directory ***
2025-10-25 03:06:53 (8668): Guest Log: total 210568
2025-10-25 03:06:53 (8668): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 17:46 pilot3.tar.gz
2025-10-25 03:06:53 (8668): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 18:15 queuedata.json
2025-10-25 03:06:53 (8668): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 18:18 runpilot2-wrapper.sh
2025-10-25 03:06:53 (8668): Guest Log: -rwxr-xr-x. 1 atlas atlas      9023 Oct 25 00:54 init_data.xml
2025-10-25 03:06:53 (8668): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 25 00:54 input.tar.gz
2025-10-25 03:06:53 (8668): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 25 00:54 start_atlas.sh
2025-10-25 03:06:53 (8668): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 25 00:54 EVNT.46771634._003721.pool.root.1 -> /data/./ATLAS.root_0
2025-10-25 03:06:53 (8668): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 25 00:54 pandaJob.out
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas    978597 Oct 25 00:55 agis_schedconf.cvmfs.json
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas   1560772 Oct 25 00:55 agis_ddmendpoints.agis.ALL.json
2025-10-25 03:06:53 (8668): Guest Log: drwx------. 5 atlas atlas      4096 Oct 25 00:55 pilot3
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas 209037446 Oct 25 03:05 HITS.46771637._091215.pool.root.1
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 25 03:05 memory_monitor_summary.json
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas    317883 Oct 25 03:06 log.46771637._091215.job.log.tgz.1
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas      7820 Oct 25 03:06 heartbeat.json
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas        95 Oct 25 03:06 pilot_heartbeat.json
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas      5063 Oct 25 03:06 pilotlog.txt
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas   1056788 Oct 25 03:06 log.46771637._091215.job.log.1
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas       357 Oct 25 03:06 output.list
2025-10-25 03:06:53 (8668): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 25 03:06 runtime_log
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas   1392640 Oct 25 03:06 result.tar.gz
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas       649 Oct 25 03:06 WBGNDmLbsV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXS6NDmKTAYAn.diag
2025-10-25 03:06:53 (8668): Guest Log: -rw-r--r--. 1 atlas atlas      8624 Oct 25 03:06 runtime_log.err
2025-10-25 03:06:53 (8668): Guest Log: Looking for outputfile HITS.46771637._091215.pool.root.1
2025-10-25 03:06:53 (8668): Guest Log: HITS file was successfully produced
2025-10-25 03:06:53 (8668): Guest Log: -rw-------. 1 atlas atlas 209037446 Oct 25 03:05 /home/atlas/RunAtlas/HITS.46771637._091215.pool.root.1
2025-10-25 03:06:54 (8668): Guest Log: Successfully finished the ATLAS job!
2025-10-25 03:06:54 (8668): Guest Log: Copying the results back to the shared directory!
2025-10-25 03:06:54 (8668): Guest Log:  *** Contents of shared directory: ***
2025-10-25 03:06:54 (8668): Guest Log: total 430208
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root 229498611 Oct 24 23:53 ATLAS.root_0
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root 209037446 Oct 25 02:06 HITS.pool.root.1
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root      9023 Oct 24 23:53 init_data.xml
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 23 04:30 input.tar.gz
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root   1392640 Oct 25 02:06 result.tar.gz
2025-10-25 03:06:54 (8668): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 23 04:30 start_atlas.sh
2025-10-25 03:06:54 (8668): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-25 03:06:54 (8668): VM Completion File Detected.
2025-10-25 03:06:54 (8668): Powering off VM.
2025-10-25 03:06:54 (8668): Successfully stopped VM.
2025-10-25 03:06:54 (8668): Deregistering VM. (boinc_ddc2dc7a8ed04eaf, slot#0)
2025-10-25 03:06:54 (8668): Removing network bandwidth throttle group from VM.
2025-10-25 03:06:54 (8668): Removing VM from VirtualBox.
2025-10-25 03:07:00 (8668): called boinc_finish(0)

</stderr_txt>
]]>

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