Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (2034632): wrapper (7.7.26015): starting
00:01:53 (2034632): wrapper: running run_atlas (--nthreads 9)
[2025-10-23 00:01:53] Arguments: --nthreads 9
[2025-10-23 00:01:53] Threads: 9
[2025-10-23 00:01:53] Checking for CVMFS
[2025-10-23 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 00:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 00:01:55] 2.13.2.0 1448902 144594 757392 152020 1 333 18885441 21551104 14211 16776704 0 115533133 99.469 155465128 28881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-23 00:01:55] CVMFS is ok
[2025-10-23 00:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 00:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 00:01:55] Further information can be found at the LHC@home message board.
[2025-10-23 00:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 00:01:55] Checking for apptainer binary...
[2025-10-23 00:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 00:01:55] Running /usr/bin/apptainer --version
[2025-10-23 00:01:56] apptainer version 1.4.3-1.el9
[2025-10-23 00:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 00:01:56] c-16-30.aglt2.org
[2025-10-23 00:01:56] apptainer works
[2025-10-23 00:01:56] Set ATHENA_PROC_NUMBER=9
[2025-10-23 00:01:56] Set ATHENA_CORE_NUMBER=9
[2025-10-23 00:01:56] Starting ATLAS job with PandaID=6853810868
[2025-10-23 00:01:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 07:15:06]  *** The last 200 lines of the pilot log: ***
[2025-10-23 07:15:06] 2025-10-23 11:14:10,704 | INFO     | time since job start (25857s) is within the limit (172800.0s)
[2025-10-23 07:15:06] 2025-10-23 11:14:10,820 | INFO     | monitor loop #1592: job 0:6853810868 is in state 'finished'
[2025-10-23 07:15:06] 2025-10-23 11:14:10,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,242 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-23 07:15:06] 2025-10-23 11:14:12,251 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2939.9948749999994
[2025-10-23 07:15:06] 2025-10-23 11:14:12,259 | INFO     | using path: /var/lib/condor/boinchome/slots/3/PanDA_Pilot-6853810868/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,261 | INFO     | extracted standard info from prmon json
[2025-10-23 07:15:06] 2025-10-23 11:14:12,261 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 07:15:06] 2025-10-23 11:14:12,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 07:15:06] 2025-10-23 11:14:12,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 07:15:06] 2025-10-23 11:14:12,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 07:15:06] 2025-10-23 11:14:12,274 | INFO     | fitting pss+swap vs Time
[2025-10-23 07:15:06] 2025-10-23 11:14:12,275 | INFO     | sum of square deviations: 23303961230.8531
[2025-10-23 07:15:06] 2025-10-23 11:14:12,281 | INFO     | sum of deviations: 168256244947.58292
[2025-10-23 07:15:06] 2025-10-23 11:14:12,281 | INFO     | mean x: 1761205181.9478674
[2025-10-23 07:15:06] 2025-10-23 11:14:12,282 | INFO     | mean y: 2154228.4810426543
[2025-10-23 07:15:06] 2025-10-23 11:14:12,282 | INFO     | -- intersect: -12713871496.125978
[2025-10-23 07:15:06] 2025-10-23 11:14:12,282 | INFO     | intersect: -12713871496.125978
[2025-10-23 07:15:06] 2025-10-23 11:14:12,283 | INFO     | chi2: 3.499325863124541
[2025-10-23 07:15:06] 2025-10-23 11:14:12,283 | INFO     | sum of square deviations: 22485482597.338127
[2025-10-23 07:15:06] 2025-10-23 11:14:12,289 | INFO     | sum of deviations: 195964444721.83456
[2025-10-23 07:15:06] 2025-10-23 11:14:12,289 | INFO     | mean x: 1761205029.4532373
[2025-10-23 07:15:06] 2025-10-23 11:14:12,290 | INFO     | mean y: 2159354.1966426857
[2025-10-23 07:15:06] 2025-10-23 11:14:12,290 | INFO     | -- intersect: -15347013790.92249
[2025-10-23 07:15:06] 2025-10-23 11:14:12,290 | INFO     | intersect: -15347013790.92249
[2025-10-23 07:15:06] 2025-10-23 11:14:12,291 | INFO     | chi2: 2.799667507705962
[2025-10-23 07:15:06] 2025-10-23 11:14:12,291 | INFO     | current chi2=2.799667507705962 (change=19.99408979859496 %)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,291 | INFO     | right removable region: 416
[2025-10-23 07:15:06] 2025-10-23 11:14:12,292 | INFO     | sum of square deviations: 22485367307.338142
[2025-10-23 07:15:06] 2025-10-23 11:14:12,297 | INFO     | sum of deviations: 89486884949.46048
[2025-10-23 07:15:06] 2025-10-23 11:14:12,298 | INFO     | mean x: 1761205334.4532373
[2025-10-23 07:15:06] 2025-10-23 11:14:12,298 | INFO     | mean y: 2168858.1774580334
[2025-10-23 07:15:06] 2025-10-23 11:14:12,298 | INFO     | -- intersect: -7007046378.664962
[2025-10-23 07:15:06] 2025-10-23 11:14:12,298 | INFO     | intersect: -7007046378.664962
[2025-10-23 07:15:06] 2025-10-23 11:14:12,299 | INFO     | chi2: 1.5265686302231665
[2025-10-23 07:15:06] 2025-10-23 11:14:12,299 | INFO     | current chi2=1.5265686302231665 (change=56.37535085514739 %)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,300 | INFO     | sum of square deviations: 21686219726.123863
[2025-10-23 07:15:06] 2025-10-23 11:14:12,305 | INFO     | sum of deviations: 71862694613.32286
[2025-10-23 07:15:06] 2025-10-23 11:14:12,306 | INFO     | mean x: 1761205486.9538834
[2025-10-23 07:15:06] 2025-10-23 11:14:12,306 | INFO     | mean y: 2172212.0169902914
[2025-10-23 07:15:06] 2025-10-23 11:14:12,306 | INFO     | -- intersect: -5834021170.631972
[2025-10-23 07:15:06] 2025-10-23 11:14:12,306 | INFO     | intersect: -5834021170.631972
[2025-10-23 07:15:06] 2025-10-23 11:14:12,307 | INFO     | chi2: 1.4436709015977192
[2025-10-23 07:15:06] 2025-10-23 11:14:12,307 | INFO     | current chi2=1.4436709015977192 (change=5.430330938565706 %)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,307 | INFO     | left removable region: 20
[2025-10-23 07:15:06] 2025-10-23 11:14:12,308 | INFO     | sum of square deviations: 19256579291.636143
[2025-10-23 07:15:06] 2025-10-23 11:14:12,314 | INFO     | sum of deviations: 51727017517.15157
[2025-10-23 07:15:06] 2025-10-23 11:14:12,314 | INFO     | mean x: 1761205608.969697
[2025-10-23 07:15:06] 2025-10-23 11:14:12,314 | INFO     | mean y: 2188762.095959596
[2025-10-23 07:15:06] 2025-10-23 11:14:12,314 | INFO     | -- intersect: -4728761216.442031
[2025-10-23 07:15:06] 2025-10-23 11:14:12,315 | INFO     | intersect: -4728761216.442031
[2025-10-23 07:15:06] 2025-10-23 11:14:12,315 | INFO     | chi2: 0.3061068174488265
[2025-10-23 07:15:06] 2025-10-23 11:14:12,316 | INFO     | -- intersect: -4728761216.442031
[2025-10-23 07:15:06] 2025-10-23 11:14:12,316 | INFO     | current memory leak: 2.69 B/s (using 396 data points, chi2=0.31)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,317 | INFO     | could have reported an average CPU frequency of 2904 MHz (18 samples)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,317 | INFO     | ..............................
[2025-10-23 07:15:06] 2025-10-23 11:14:12,317 | INFO     | . Timing measurements:
[2025-10-23 07:15:06] 2025-10-23 11:14:12,317 | INFO     | . get job = 0 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . initial setup = 6 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . payload setup = 43 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . stage-in = 0 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . payload execution = 25731 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . stage-out = 2 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,318 | INFO     | . log creation = 0 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,319 | INFO     | ..............................
[2025-10-23 07:15:06] 2025-10-23 11:14:12,475 | INFO     | 
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | job summary report
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | --------------------------------------------------
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | PanDA job id: 6853810868
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | task id: 46771637
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | errors: (none)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | pilot state: finished 
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | transexitcode: 0
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | exeerrorcode: 0
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | exeerrordiag: 
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | exitcode: 0
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | exitmsg: OK
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | cpuconsumptiontime: 92126 s
[2025-10-23 07:15:06] 2025-10-23 11:14:12,477 | INFO     | nevents: 400
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | neventsw: 0
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | pid: 2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | pgrp: 2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | corecount: 9
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | event service: False
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | sizes: {0: 2348714, 1: 2348798, 2: 2348997, 14: 2348997, 25: 2349025, 32: 2349315, 36: 2349471, 25778: 2385585, 25782: 2394689, 25788: 2394827}
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | --------------------------------------------------
[2025-10-23 07:15:06] 2025-10-23 11:14:12,478 | INFO     | 
[2025-10-23 07:15:06] 2025-10-23 11:14:12,479 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/3
[2025-10-23 07:15:06] 2025-10-23 11:14:12,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 07:15:06] 2025-10-23 11:14:12,502 | INFO     | job 6853810868 has completed (purged errors)
[2025-10-23 07:15:06] 2025-10-23 11:14:12,502 | INFO     | overall cleanup function is called
[2025-10-23 07:15:06] 2025-10-23 11:14:13,509 | INFO     | --- collectZombieJob: --- 10, [2062819]
[2025-10-23 07:15:06] 2025-10-23 11:14:13,509 | INFO     | zombie collector waiting for pid 2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:13,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 07:15:06] 2025-10-23 11:14:13,510 | INFO     | collected zombie processes
[2025-10-23 07:15:06] 2025-10-23 11:14:13,510 | INFO     | will attempt to kill all subprocesses of pid=2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:13,920 | INFO     | process IDs to be killed: [2062819] (in reverse order)
[2025-10-23 07:15:06] 2025-10-23 11:14:14,008 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 07:15:06] 2025-10-23 11:14:14,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 07:15:06] 2025-10-23 11:14:14,026 | INFO     | did not find any defunct processes belonging to 2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:14,043 | INFO     | did not find any defunct processes belonging to 2062819
[2025-10-23 07:15:06] 2025-10-23 11:14:14,044 | INFO     | ready for new job
[2025-10-23 07:15:06] 2025-10-23 11:14:14,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 07:15:06] 2025-10-23 11:14:14,046 | INFO     | ***************************************
[2025-10-23 07:15:06] 2025-10-23 11:14:14,047 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 07:15:06] 2025-10-23 11:14:14,047 | INFO     | ***************************************
[2025-10-23 07:15:06] 2025-10-23 11:14:14,047 | INFO     | 
[2025-10-23 07:15:06] 2025-10-23 11:14:14,049 | INFO     | architecture information:
[2025-10-23 07:15:06] 2025-10-23 11:14:14,050 | INFO     | executing command: cat /etc/os-release
[2025-10-23 07:15:06] 2025-10-23 11:14:14,064 | INFO     | cat /etc/os-release:
[2025-10-23 07:15:06] NAME="CentOS Linux"
[2025-10-23 07:15:06] VERSION="7 (Core)"
[2025-10-23 07:15:06] ID="centos"
[2025-10-23 07:15:06] ID_LIKE="rhel fedora"
[2025-10-23 07:15:06] VERSION_ID="7"
[2025-10-23 07:15:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 07:15:06] ANSI_COLOR="0;31"
[2025-10-23 07:15:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 07:15:06] HOME_URL="https://www.centos.org/"
[2025-10-23 07:15:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 07:15:06] 
[2025-10-23 07:15:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 07:15:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 07:15:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 07:15:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 07:15:06] 
[2025-10-23 07:15:06] 2025-10-23 11:14:14,064 | INFO     | ***************************************
[2025-10-23 07:15:06] 2025-10-23 11:14:14,567 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/3
[2025-10-23 07:15:06] 2025-10-23 11:14:14,579 | INFO     | sufficient remaining disk space (1823485198336 B)
[2025-10-23 07:15:06] 2025-10-23 11:14:14,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 07:15:06] 2025-10-23 11:14:14,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 07:15:06] 2025-10-23 11:14:14,580 | INFO     | update_server=False
[2025-10-23 07:15:06] 2025-10-23 11:14:14,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 07:15:06] 2025-10-23 11:14:14,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 07:15:06] 2025-10-23 11:14:14,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 07:15:06] 2025-10-23 11:14:14,581 | INFO     | aborting loop
[2025-10-23 07:15:06] 2025-10-23 11:14:15,131 | INFO     | all job control threads have been joined
[2025-10-23 07:15:06] 2025-10-23 11:14:15,519 | INFO     | all data control threads have been joined
[2025-10-23 07:15:06] 2025-10-23 11:14:15,585 | INFO     | [job] retrieve thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:15,586 | INFO     | [job] job monitor thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:15,587 | INFO     | [payload] failed_post thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,024 | INFO     | all payload control threads have been joined
[2025-10-23 07:15:06] 2025-10-23 11:14:16,136 | INFO     | [job] control thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,284 | INFO     | [job] validate thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,310 | INFO     | [payload] validate_post thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,366 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,385 | INFO     | [data] copytool_in thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,525 | INFO     | [data] control thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,586 | INFO     | [data] copytool_out thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 07:15:06] 2025-10-23 11:14:16,739 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:16,864 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:17,030 | INFO     | [payload] control thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:17,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 07:15:06] 2025-10-23 11:14:18,490 | INFO     | [job] queue monitor thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:20,715 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 07:15:06] 2025-10-23 11:14:44,313 | INFO     | PID=2050576 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 07:15:06] 2025-10-23 11:14:44,313 | INFO     | .. there are 19 such processes running
[2025-10-23 07:15:06] 2025-10-23 11:14:44,314 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 07:15:06] 2025-10-23 11:14:44,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 07:15:06] 2025-10-23 11:14:44,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 07:15:06] 2025-10-23 11:14:58,587 | INFO     | [monitor] cgroup control has ended
[2025-10-23 07:15:06] 2025-10-23 11:15:00,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127524603712)>', '<ExcThread(monitor, started 140127024162560)>']
[2025-10-23 07:15:06] 2025-10-23 11:15:00,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 07:15:06] 2025-10-23 11:15:00,405 | INFO     | [monitor] control thread has ended
[2025-10-23 07:15:06] 2025-10-23 11:15:05,389 | INFO     | all workflow threads have been joined
[2025-10-23 07:15:06] 2025-10-23 11:15:05,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 07:15:06] 2025-10-23 11:15:05,390 | INFO     | traces error code: 0
[2025-10-23 07:15:06] 2025-10-23 11:15:05,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 07:15:06] 2025-10-23 11:15:05,639 [wrapper] ==== pilot stdout END ====
[2025-10-23 07:15:06] 2025-10-23 11:15:05,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 07:15:06] 2025-10-23 11:15:05,659 [wrapper] pilotpid: 2050576
[2025-10-23 07:15:06] 2025-10-23 11:15:05,665 [wrapper] Pilot exit status: 0
[2025-10-23 07:15:06] 2025-10-23 11:15:05,686 [wrapper] pandaids: 6853810868
[2025-10-23 07:15:06] 2025-10-23 11:15:05,792 [wrapper] cleanup supervisor_pilot 3167077 2050577
[2025-10-23 07:15:06] 2025-10-23 11:15:05,802 [wrapper] Test setup, not cleaning
[2025-10-23 07:15:06] 2025-10-23 11:15:05,840 [wrapper] apfmon messages muted
[2025-10-23 07:15:06] 2025-10-23 11:15:05,855 [wrapper] ==== wrapper stdout END ====
[2025-10-23 07:15:06] 2025-10-23 11:15:05,871 [wrapper] ==== wrapper stderr END ====
[2025-10-23 07:15:06]  *** Error codes and diagnostics ***
[2025-10-23 07:15:06]     "exeErrorCode": 0,
[2025-10-23 07:15:06]     "exeErrorDiag": "",
[2025-10-23 07:15:06]     "pilotErrorCode": 0,
[2025-10-23 07:15:06]     "pilotErrorDiag": "",
[2025-10-23 07:15:06]  *** Listing of results directory ***
[2025-10-23 07:15:06] total 446848
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 14:48 pilot3.tar.gz
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 15:25 queuedata.json
[2025-10-23 07:15:06] -rwx------. 1 boincer umatlas     36292 Oct 22 15:27 runpilot2-wrapper.sh
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas       100 Oct 23 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 07:15:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 23 00:01 run_atlas
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas       105 Oct 23 00:01 job.xml
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas 231012616 Oct 23 00:01 EVNT.46771634._003758.pool.root.1
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 00:01 start_atlas.sh
[2025-10-23 07:15:06] drwxrwx--x. 2 boincer umatlas        68 Oct 23 00:01 shared
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas    569676 Oct 23 00:01 input.tar.gz
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas         0 Oct 23 00:01 boinc_lockfile
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas      2559 Oct 23 00:01 pandaJob.out
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas    978108 Oct 23 00:03 agis_schedconf.cvmfs.json
[2025-10-23 07:15:06] drwx------. 5 boincer umatlas      4096 Oct 23 00:03 pilot3
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas 214818609 Oct 23 07:13 HITS.46771637._092386.pool.root.1
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas       531 Oct 23 07:13 boinc_task_state.xml
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas      6549 Oct 23 07:13 init_data.xml
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas        95 Oct 23 07:13 pilot_heartbeat.json
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas      1035 Oct 23 07:13 memory_monitor_summary.json
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas   1560740 Oct 23 07:14 agis_ddmendpoints.agis.ALL.json
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas    623858 Oct 23 07:14 log.46771637._092386.job.log.tgz.1
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas      7815 Oct 23 07:14 heartbeat.json
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas        28 Oct 23 07:14 wrapper_checkpoint.txt
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas      4837 Oct 23 07:15 pilotlog.txt
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 07:15 boinc_mmap_file
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas   3301323 Oct 23 07:15 log.46771637._092386.job.log.1
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas       357 Oct 23 07:15 output.list
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas       620 Oct 23 07:15 runtime_log
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas   3942400 Oct 23 07:15 result.tar.gz
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas       657 Oct 23 07:15 uk1NDm3ftV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4c6NDmKz792n.diag
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas      8853 Oct 23 07:15 runtime_log.err
[2025-10-23 07:15:06] -rw-r--r--. 1 boincer umatlas     21282 Oct 23 07:15 stderr.txt
[2025-10-23 07:15:06] HITS file was successfully produced:
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas 214818609 Oct 23 07:13 shared/HITS.pool.root.1
[2025-10-23 07:15:06]  *** Contents of shared directory: ***
[2025-10-23 07:15:06] total 439816
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas 231012616 Oct 23 00:01 ATLAS.root_0
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 23 00:01 start_atlas.sh
[2025-10-23 07:15:06] -rw-r--r--. 2 boincer umatlas    569676 Oct 23 00:01 input.tar.gz
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas 214818609 Oct 23 07:13 HITS.pool.root.1
[2025-10-23 07:15:06] -rw-------. 1 boincer umatlas   3942400 Oct 23 07:15 result.tar.gz
07:15:08 (2034632): run_atlas exited; CPU time 93089.453391
07:15:08 (2034632): called boinc_finish(0)

</stderr_txt>
]]>

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