Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 22:30:21 (15244): vboxwrapper version 26210
2025-10-22 22:30:21 (15244): BOINC client version: 8.2.4
2025-10-22 22:30:21 (15244): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-10-22 22:30:21 (15244): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 22:30:22 (15244): Create VM. (boinc_195c1c0fd81812dc, slot#1)
2025-10-22 22:30:22 (15244): Setting Memory Size for VM. (4400MB)
2025-10-22 22:30:22 (15244): Setting CPU Count for VM. (4)
2025-10-22 22:30:23 (15244): Setting Chipset Options for VM.
2025-10-22 22:30:23 (15244): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 22:30:23 (15244): Setting Boot Options for VM.
2025-10-22 22:30:24 (15244): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 22:30:24 (15244): Enabling VM Network Access.
2025-10-22 22:30:24 (15244): Disabling USB Support for VM.
2025-10-22 22:30:24 (15244): Disabling COM Port Support for VM.
2025-10-22 22:30:25 (15244): Disabling LPT Port Support for VM.
2025-10-22 22:30:25 (15244): Disabling Audio Support for VM.
2025-10-22 22:30:25 (15244): Disabling Clipboard Support for VM.
2025-10-22 22:30:25 (15244): Disabling Drag and Drop Support for VM.
2025-10-22 22:30:26 (15244): Adding storage controller(s) to VM.
2025-10-22 22:30:26 (15244): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 22:30:26 (15244): Adding VirtualBox Guest Additions to VM.
2025-10-22 22:30:27 (15244): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 22:30:27 (15244): forwarding host port 54952 to guest port 80
2025-10-22 22:30:27 (15244): Enabling remote desktop for VM.
2025-10-22 22:30:27 (15244): Required extension pack not installed, remote desktop not enabled.
2025-10-22 22:30:27 (15244): Enabling shared directory for VM.
2025-10-22 22:30:28 (15244): Starting VM using VBoxManage interface. (boinc_195c1c0fd81812dc, slot#1)
2025-10-22 22:30:33 (15244): Successfully started VM. (PID = '14504')
2025-10-22 22:30:33 (15244): Reporting VM Process ID to BOINC.
2025-10-22 22:30:33 (15244): Guest Log: BIOS: VirtualBox 7.2.0
2025-10-22 22:30:33 (15244): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 22:30:33 (15244): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 22:30:33 (15244): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 22:30:33 (15244): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 22:30:33 (15244): Detected: Web Application Enabled (http://localhost:54952)
2025-10-22 22:30:33 (15244): Preference change detected
2025-10-22 22:30:33 (15244): Setting CPU throttle for VM. (80%)
2025-10-22 22:30:33 (15244): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 22:30:35 (15244): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 22:30:35 (15244): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 22:30:38 (15244): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 22:30:38 (15244): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 22:30:38 (15244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 22:30:46 (15244): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 22:30:46 (15244): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 22:30:56 (15244): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000190 main     Log opened 2025-10-22T22:30:54.336044000Z
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000330 main     OS Product: Linux
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000392 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000426 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000457 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000458 main     Process ID: 1308
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.000459 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 22:30:56 (15244): Guest Log: 00:00:00.002322 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 22:30:56 (15244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 22:30:56 (15244): Guest Log: [INFO] Mounting shared directory
2025-10-22 22:30:56 (15244): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 22:30:59 (15244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 22:30:59 (15244): Guest Log: [INFO] Detected branch: prod
2025-10-22 22:31:00 (15244): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 22:31:00 (15244): Guest Log: Copying input files
2025-10-22 22:31:01 (15244): Guest Log: Copied input files into RunAtlas.
2025-10-22 22:31:01 (15244): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 22:31:01 (15244): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 22:31:01 (15244): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 22:31:01 (15244): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 22:31:06 (15244): Guest Log: 00:00:10.016174 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 546 719 000ns (GuestNow=1 761 186 665 890 349 000 ns GuestLast=1 761 172 254 343 630 000 ns fSetTimeLastLoop=true )
2025-10-22 22:31:38 (15244): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 22:31:38 (15244): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 22:31:38 (15244): Guest Log: 2.6.3.0 1586 0 32076 152018 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 22:31:39 (15244): Guest Log: copied the webapp to /var/www
2025-10-22 22:31:39 (15244): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-22 22:31:39 (15244): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-22 22:31:39 (15244): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 22:31:39 (15244): Guest Log:  *** Starting ATLAS job. (PandaID=6853859634 taskID=46771637) ***
2025-10-23 00:10:35 (15244): Status Report: Elapsed Time: '6000.000000'
2025-10-23 00:10:35 (15244): Status Report: CPU Time: '11461.484375'
2025-10-23 01:50:37 (15244): Status Report: Elapsed Time: '12000.000000'
2025-10-23 01:50:37 (15244): Status Report: CPU Time: '24044.093750'
2025-10-23 03:30:39 (15244): Status Report: Elapsed Time: '18000.000000'
2025-10-23 03:30:39 (15244): Status Report: CPU Time: '36126.093750'
2025-10-23 04:57:32 (15244): Guest Log:  *** Job finished ***
2025-10-23 04:57:32 (15244): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:05,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:05,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:24,670 | INFO     | [monitor] cgroup control has ended
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:25,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710375884608)>', '<ExcThread(monitor, started 139709682530048)>']
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:25,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:25,667 | INFO     | [monitor] control thread has ended
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,443 | INFO     | all workflow threads have been joined
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,443 | INFO     | end of generic workflow (traces error code: 0)
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,443 | INFO     | traces error code: 0
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,586 [wrapper] ==== pilot stdout END ====
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,610 [wrapper] ==== wrapper stdout RESUME ====
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,635 [wrapper] pilotpid: 6001
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,666 [wrapper] Pilot exit status: 0
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:30,942 [wrapper] pandaids: 6853859634
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:31,124 [wrapper] cleanup supervisor_pilot 26410 6002
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:31,152 [wrapper] Test setup, not cleaning
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:31,181 [wrapper] apfmon messages muted
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:31,213 [wrapper] ==== wrapper stdout END ====
2025-10-23 04:57:32 (15244): Guest Log: 2025-10-23 08:57:31,229 [wrapper] ==== wrapper stderr END ====
2025-10-23 04:57:32 (15244): Guest Log:  *** Error codes and diagnostics ***
2025-10-23 04:57:32 (15244): Guest Log:     "exeErrorCode": 0,
2025-10-23 04:57:32 (15244): Guest Log:     "exeErrorDiag": "",
2025-10-23 04:57:32 (15244): Guest Log:     "pilotErrorCode": 0,
2025-10-23 04:57:32 (15244): Guest Log:     "pilotErrorDiag": "",
2025-10-23 04:57:32 (15244): Guest Log:  *** Listing of results directory ***
2025-10-23 04:57:32 (15244): Guest Log: total 219584
2025-10-23 04:57:32 (15244): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 21:01 pilot3.tar.gz
2025-10-23 04:57:32 (15244): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 21:21 runpilot2-wrapper.sh
2025-10-23 04:57:32 (15244): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 21:21 queuedata.json
2025-10-23 04:57:32 (15244): Guest Log: -rwxr-xr-x. 1 atlas atlas      9005 Oct 23 02:31 init_data.xml
2025-10-23 04:57:32 (15244): Guest Log: -rwxr-xr-x. 1 atlas atlas    569670 Oct 23 02:31 input.tar.gz
2025-10-23 04:57:32 (15244): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 23 02:31 start_atlas.sh
2025-10-23 04:57:32 (15244): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 23 02:31 EVNT.46771634._003818.pool.root.1 -> /data/./ATLAS.root_0
2025-10-23 04:57:32 (15244): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 23 02:31 pandaJob.out
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas    978108 Oct 23 02:32 agis_schedconf.cvmfs.json
2025-10-23 04:57:32 (15244): Guest Log: drwx------. 5 atlas atlas      4096 Oct 23 02:33 pilot3
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas 214106863 Oct 23 08:55 HITS.46771637._093847.pool.root.1
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas      1025 Oct 23 08:56 memory_monitor_summary.json
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 23 08:56 agis_ddmendpoints.agis.ALL.json
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas    496590 Oct 23 08:56 log.46771637._093847.job.log.tgz.1
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas        95 Oct 23 08:56 pilot_heartbeat.json
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas      7813 Oct 23 08:56 heartbeat.json
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas      5063 Oct 23 08:57 pilotlog.txt
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas   2958915 Oct 23 08:57 log.46771637._093847.job.log.1
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas       357 Oct 23 08:57 output.list
2025-10-23 04:57:32 (15244): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 23 08:57 runtime_log
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas   3471360 Oct 23 08:57 result.tar.gz
2025-10-23 04:57:32 (15244): Guest Log: -rw-r--r--. 1 atlas atlas      8604 Oct 23 08:57 runtime_log.err
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas       647 Oct 23 08:57 5keKDmnRvV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVo6NDmZdrtOo.diag
2025-10-23 04:57:32 (15244): Guest Log: Looking for outputfile HITS.46771637._093847.pool.root.1
2025-10-23 04:57:32 (15244): Guest Log: HITS file was successfully produced
2025-10-23 04:57:32 (15244): Guest Log: -rw-------. 1 atlas atlas 214106863 Oct 23 08:55 /home/atlas/RunAtlas/HITS.46771637._093847.pool.root.1
2025-10-23 04:57:36 (15244): Guest Log: Successfully finished the ATLAS job!
2025-10-23 04:57:36 (15244): Guest Log: Copying the results back to the shared directory!
2025-10-23 04:57:36 (15244): Guest Log:  *** Contents of shared directory: ***
2025-10-23 04:57:36 (15244): Guest Log: total 434952
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root 227202051 Oct 23 02:30 ATLAS.root_0
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root 214106863 Oct 23 08:57 HITS.pool.root.1
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root      9005 Oct 23 02:30 init_data.xml
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root    569670 Oct 23 02:30 input.tar.gz
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root   3471360 Oct 23 08:57 result.tar.gz
2025-10-23 04:57:36 (15244): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 23 02:30 start_atlas.sh
2025-10-23 04:57:36 (15244): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-23 04:57:36 (15244): VM Completion File Detected.
2025-10-23 04:57:36 (15244): Powering off VM.
2025-10-23 04:57:36 (15244): Successfully stopped VM.
2025-10-23 04:57:36 (15244): Deregistering VM. (boinc_195c1c0fd81812dc, slot#1)
2025-10-23 04:57:36 (15244): Removing network bandwidth throttle group from VM.
2025-10-23 04:57:37 (15244): Removing VM from VirtualBox.
2025-10-23 04:57:42 (15244): called boinc_finish(0)

</stderr_txt>
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