Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:00:56 (2227409): wrapper (7.7.26015): starting
14:00:56 (2227409): wrapper: running run_atlas (--nthreads 12)
[2025-10-23 14:00:56] Arguments: --nthreads 12
[2025-10-23 14:00:56] Threads: 12
[2025-10-23 14:00:56] Checking for CVMFS
[2025-10-23 14:00:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 14:00:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 14:00:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 14:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 14:00:56] 2.13.2.0 8705 49086 137008 152036 0 188 45041461 46080000 922 130560 0 88642408 99.997 1646321 800 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-23 14:00:56] CVMFS is ok
[2025-10-23 14:00:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 14:00:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 14:00:56] Further information can be found at the LHC@home message board.
[2025-10-23 14:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 14:00:56] Checking for apptainer binary...
[2025-10-23 14:00:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 14:00:56] Running /usr/bin/apptainer --version
[2025-10-23 14:00:56] apptainer version 1.4.2-1.el9
[2025-10-23 14:00:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 14:00:56] gpu01.farm.particle.cz
[2025-10-23 14:00:56] apptainer works
[2025-10-23 14:00:56] Set ATHENA_PROC_NUMBER=12
[2025-10-23 14:00:56] Set ATHENA_CORE_NUMBER=12
[2025-10-23 14:00:56] Starting ATLAS job with PandaID=6853700301
[2025-10-23 14:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 14:45:19]  *** The last 200 lines of the pilot log: ***
[2025-10-23 14:45:19]  storage_token=
[2025-10-23 14:45:19]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6853700301/log.46771637._089785.job.log.tgz.1
[2025-10-23 14:45:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/a3/log.46771637._089785.job.log.tgz.1
[2025-10-23 14:45:19]  workdir=None
[2025-10-23 14:45:19] ]
[2025-10-23 14:45:19] 2025-10-23 12:44:41,379 | INFO     | transferring file log.46771637._089785.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6853700301/log.46771637._089785.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-23 14:45:19] 2025-10-23 12:44:41,379 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6853700301/log.46771637._089785.job.log.tgz.1 /var/lib/boinc/slots/1/log.46771637._089785.job
[2025-10-23 14:45:19] 2025-10-23 12:44:41,393 | INFO     | adding to output.list: log.46771637._089785.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/a3/log.46771637._089785.job.log.tg
[2025-10-23 14:45:19] 2025-10-23 12:44:41,393 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 14:45:19] 2025-10-23 12:44:41,393 | INFO     | summary of transferred files:
[2025-10-23 14:45:19] 2025-10-23 12:44:41,393 | INFO     |  -- lfn=log.46771637._089785.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 14:45:19] 2025-10-23 12:44:41,393 | INFO     | stage-out finished correctly
[2025-10-23 14:45:19] 2025-10-23 12:44:41,789 | INFO     | time since job start (2615s) is within the limit (172800.0s)
[2025-10-23 14:45:19] 2025-10-23 12:44:41,908 | INFO     | monitor loop #202: job 0:6853700301 is in state 'finished'
[2025-10-23 14:45:19] 2025-10-23 12:44:41,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 14:45:19] 2025-10-23 12:44:43,792 | INFO     | time since job start (2617s) is within the limit (172800.0s)
[2025-10-23 14:45:19] 2025-10-23 12:44:44,411 | INFO     | monitor loop #203: job 0:6853700301 is in state 'finished'
[2025-10-23 14:45:19] 2025-10-23 12:44:44,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 14:45:19] 2025-10-23 12:44:44,433 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 14:45:19] 2025-10-23 12:44:44,482 | INFO     | job 6853700301 has state=finished
[2025-10-23 14:45:19] 2025-10-23 12:44:44,482 | INFO     | preparing for final server update for job 6853700301 in state='finished'
[2025-10-23 14:45:19] 2025-10-23 12:44:44,483 | INFO     | this job has now completed (state=finished)
[2025-10-23 14:45:19] 2025-10-23 12:44:44,483 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 14:45:19] 2025-10-23 12:44:44,483 | INFO     | log transfer has been attempted: DONE
[2025-10-23 14:45:19] 2025-10-23 12:44:44,483 | INFO     | job 6853700301 has finished - writing final server update
[2025-10-23 14:45:19] 2025-10-23 12:44:44,483 | INFO     | total number of processed events: 400 (read)
[2025-10-23 14:45:19] 2025-10-23 12:44:44,484 | INFO     | executing command: lscpu
[2025-10-23 14:45:19] 2025-10-23 12:44:44,511 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 14:45:19] 2025-10-23 12:44:45,800 | INFO     | time since job start (2619s) is within the limit (172800.0s)
[2025-10-23 14:45:19] 2025-10-23 12:44:46,915 | INFO     | monitor loop #204: job 0:6853700301 is in state 'finished'
[2025-10-23 14:45:19] 2025-10-23 12:44:46,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 14:45:19] 2025-10-23 12:44:46,921 | INFO     | PID=2231310 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 14:45:19] 2025-10-23 12:44:46,921 | INFO     | .. there are 2 such processes running
[2025-10-23 14:45:19] 2025-10-23 12:44:47,163 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 14:45:19] 2025-10-23 12:44:47,168 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3224.1756874999996
[2025-10-23 14:45:19] 2025-10-23 12:44:47,173 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6853700301/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,174 | INFO     | extracted standard info from prmon json
[2025-10-23 14:45:19] 2025-10-23 12:44:47,174 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 14:45:19] 2025-10-23 12:44:47,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 14:45:19] 2025-10-23 12:44:47,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 14:45:19] 2025-10-23 12:44:47,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 14:45:19] 2025-10-23 12:44:47,175 | INFO     | fitting pss+swap vs Time
[2025-10-23 14:45:19] 2025-10-23 12:44:47,175 | INFO     | sum of square deviations: 14456085.0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,175 | INFO     | sum of deviations: -860250121.0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | mean x: 1761222259.5
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | mean y: 2769856.5
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | -- intersect: 104809269115.65408
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | intersect: 104809269115.65408
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | chi2: 0.018027462363147496
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | -- intersect: 104809269115.65408
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | current memory leak: -59.51 B/s (using 36 data points, chi2=0.02)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | could have reported an average CPU frequency of 3226 MHz (5 samples)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | ..............................
[2025-10-23 14:45:19] 2025-10-23 12:44:47,176 | INFO     | . Timing measurements:
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . get job = 0 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . initial setup = 2 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . payload setup = 3 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . stage-in = 0 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . payload execution = 2593 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . stage-out = 0 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | . log creation = 0 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,177 | INFO     | ..............................
[2025-10-23 14:45:19] 2025-10-23 12:44:47,253 | INFO     | 
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | job summary report
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | --------------------------------------------------
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | PanDA job id: 6853700301
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | task id: 46771637
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | errors: (none)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | pilot state: finished 
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | transexitcode: 0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | exeerrorcode: 0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | exeerrordiag: 
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | exitcode: 0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | exitmsg: OK
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | cpuconsumptiontime: 28347 s
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | nevents: 400
[2025-10-23 14:45:19] 2025-10-23 12:44:47,254 | INFO     | neventsw: 0
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | pid: 2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | pgrp: 2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | corecount: 12
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | event service: False
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | sizes: {0: 2348931, 3: 2349193, 11: 2349221, 2600: 2374484, 2601: 2383537, 2604: 2383537, 2607: 2383891}
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | --------------------------------------------------
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | 
[2025-10-23 14:45:19] 2025-10-23 12:44:47,255 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-23 14:45:19] 2025-10-23 12:44:47,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,271 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | job 6853700301 has completed (purged errors)
[2025-10-23 14:45:19] 2025-10-23 12:44:47,273 | INFO     | overall cleanup function is called
[2025-10-23 14:45:19] 2025-10-23 12:44:48,281 | INFO     | --- collectZombieJob: --- 10, [2238291]
[2025-10-23 14:45:19] 2025-10-23 12:44:48,282 | INFO     | zombie collector waiting for pid 2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:48,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 14:45:19] 2025-10-23 12:44:48,282 | INFO     | collected zombie processes
[2025-10-23 14:45:19] 2025-10-23 12:44:48,282 | INFO     | will attempt to kill all subprocesses of pid=2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:48,409 | INFO     | process IDs to be killed: [2238291] (in reverse order)
[2025-10-23 14:45:19] 2025-10-23 12:44:48,447 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 14:45:19] 2025-10-23 12:44:48,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 14:45:19] 2025-10-23 12:44:48,451 | INFO     | did not find any defunct processes belonging to 2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:48,453 | INFO     | did not find any defunct processes belonging to 2238291
[2025-10-23 14:45:19] 2025-10-23 12:44:48,454 | INFO     | ready for new job
[2025-10-23 14:45:19] 2025-10-23 12:44:48,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 14:45:19] 2025-10-23 12:44:48,454 | INFO     | ***************************************
[2025-10-23 14:45:19] 2025-10-23 12:44:48,455 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 14:45:19] 2025-10-23 12:44:48,455 | INFO     | ***************************************
[2025-10-23 14:45:19] 2025-10-23 12:44:48,455 | INFO     | 
[2025-10-23 14:45:19] 2025-10-23 12:44:48,456 | INFO     | architecture information:
[2025-10-23 14:45:19] 2025-10-23 12:44:48,456 | INFO     | executing command: cat /etc/os-release
[2025-10-23 14:45:19] 2025-10-23 12:44:48,467 | INFO     | cat /etc/os-release:
[2025-10-23 14:45:19] NAME="CentOS Linux"
[2025-10-23 14:45:19] VERSION="7 (Core)"
[2025-10-23 14:45:19] ID="centos"
[2025-10-23 14:45:19] ID_LIKE="rhel fedora"
[2025-10-23 14:45:19] VERSION_ID="7"
[2025-10-23 14:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 14:45:19] ANSI_COLOR="0;31"
[2025-10-23 14:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 14:45:19] HOME_URL="https://www.centos.org/"
[2025-10-23 14:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 14:45:19] 
[2025-10-23 14:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 14:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 14:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 14:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 14:45:19] 
[2025-10-23 14:45:19] 2025-10-23 12:44:48,468 | INFO     | ***************************************
[2025-10-23 14:45:19] 2025-10-23 12:44:48,970 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | INFO     | sufficient remaining disk space (52048166912 B)
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | INFO     | update_server=False
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 14:45:19] 2025-10-23 12:44:48,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 14:45:19] 2025-10-23 12:44:49,124 | INFO     | all payload control threads have been joined
[2025-10-23 14:45:19] 2025-10-23 12:44:49,418 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-23 14:45:19] 2025-10-23 12:44:49,418 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-23 14:45:19] 2025-10-23 12:44:49,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 14:45:19] 2025-10-23 12:44:49,418 | INFO     | will abort loop
[2025-10-23 14:45:19] 2025-10-23 12:44:49,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 14:45:19] 2025-10-23 12:44:49,513 | INFO     | all job control threads have been joined
[2025-10-23 14:45:19] 2025-10-23 12:44:49,989 | INFO     | [job] retrieve thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:49,990 | INFO     | [job] queue monitor thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,015 | INFO     | all data control threads have been joined
[2025-10-23 14:45:19] 2025-10-23 12:44:50,129 | INFO     | [payload] control thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,424 | INFO     | [job] job monitor thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,424 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 14:45:19] 2025-10-23 12:44:50,518 | INFO     | [job] control thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,784 | INFO     | [job] validate thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:50,832 | INFO     | [data] copytool_in thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,001 | INFO     | [payload] failed_post thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,021 | INFO     | [data] control thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,048 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,121 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,466 | INFO     | [data] copytool_out thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:51,567 | INFO     | [payload] validate_post thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:54,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:44:59,247 | INFO     | job.realtimelogging is not enabled
[2025-10-23 14:45:19] 2025-10-23 12:45:00,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 14:45:19] 2025-10-23 12:45:08,806 | INFO     | [monitor] cgroup control has ended
[2025-10-23 14:45:19] 2025-10-23 12:45:10,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946530228032)>', '<ExcThread(monitor, started 139946039949056)>']
[2025-10-23 14:45:19] 2025-10-23 12:45:15,177 | INFO     | all workflow threads have been joined
[2025-10-23 14:45:19] 2025-10-23 12:45:15,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 14:45:19] 2025-10-23 12:45:15,178 | INFO     | traces error code: 0
[2025-10-23 14:45:19] 2025-10-23 12:45:15,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | INFO     | PID=2231310 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | INFO     | .. there are 2 such processes running
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 14:45:19] 2025-10-23 12:45:19,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 14:45:19] 2025-10-23 12:45:19,098 | INFO     | [monitor] control thread has ended
[2025-10-23 14:45:19] 2025-10-23 12:45:19,190 [wrapper] ==== pilot stdout END ====
[2025-10-23 14:45:19] 2025-10-23 12:45:19,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 14:45:19] 2025-10-23 12:45:19,194 [wrapper] pilotpid: 2231310
[2025-10-23 14:45:19] 2025-10-23 12:45:19,196 [wrapper] Pilot exit status: 0
[2025-10-23 14:45:19] 2025-10-23 12:45:19,204 [wrapper] pandaids: 6853700301
[2025-10-23 14:45:19] 2025-10-23 12:45:19,229 [wrapper] cleanup supervisor_pilot 2260178 2231311
[2025-10-23 14:45:19] 2025-10-23 12:45:19,231 [wrapper] Test setup, not cleaning
[2025-10-23 14:45:19] 2025-10-23 12:45:19,233 [wrapper] apfmon messages muted
[2025-10-23 14:45:19] 2025-10-23 12:45:19,235 [wrapper] ==== wrapper stdout END ====
[2025-10-23 14:45:19] 2025-10-23 12:45:19,237 [wrapper] ==== wrapper stderr END ====
[2025-10-23 14:45:19]  *** Error codes and diagnostics ***
[2025-10-23 14:45:19]     "exeErrorCode": 0,
[2025-10-23 14:45:19]     "exeErrorDiag": "",
[2025-10-23 14:45:19]     "pilotErrorCode": 0,
[2025-10-23 14:45:19]     "pilotErrorDiag": "",
[2025-10-23 14:45:19]  *** Listing of results directory ***
[2025-10-23 14:45:19] total 431408
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc    557409 Oct 22 17:53 pilot3.tar.gz
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc      5112 Oct 22 18:06 queuedata.json
[2025-10-23 14:45:19] -rwx------ 1 boinc boinc     36292 Oct 22 18:07 runpilot2-wrapper.sh
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc       100 Oct 23 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 14:45:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 23 14:00 run_atlas
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc       105 Oct 23 14:00 job.xml
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc      9445 Oct 23 14:00 init_data.xml
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc 230318471 Oct 23 14:00 EVNT.46771634._003665.pool.root.1
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc     15120 Oct 23 14:00 start_atlas.sh
[2025-10-23 14:45:19] drwxrwx--x 2 boinc boinc      4096 Oct 23 14:00 shared
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc    569675 Oct 23 14:00 input.tar.gz
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc         0 Oct 23 14:00 boinc_lockfile
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc      2560 Oct 23 14:00 pandaJob.out
[2025-10-23 14:45:19] -rw------- 1 boinc boinc    978095 Oct 23 14:01 agis_schedconf.cvmfs.json
[2025-10-23 14:45:19] -rw------- 1 boinc boinc   1560740 Oct 23 14:01 agis_ddmendpoints.agis.ALL.json
[2025-10-23 14:45:19] drwx------ 5 boinc boinc      4096 Oct 23 14:01 pilot3
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc       530 Oct 23 14:44 boinc_task_state.xml
[2025-10-23 14:45:19] -rw------- 1 boinc boinc 205988731 Oct 23 14:44 HITS.46771637._089785.pool.root.1
[2025-10-23 14:45:19] -rw------- 1 boinc boinc        95 Oct 23 14:44 pilot_heartbeat.json
[2025-10-23 14:45:19] -rw------- 1 boinc boinc      1016 Oct 23 14:44 memory_monitor_summary.json
[2025-10-23 14:45:19] -rw------- 1 boinc boinc    357966 Oct 23 14:44 log.46771637._089785.job.log.tgz.1
[2025-10-23 14:45:19] -rw------- 1 boinc boinc      7770 Oct 23 14:44 heartbeat.json
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc        27 Oct 23 14:45 wrapper_checkpoint.txt
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc      8192 Oct 23 14:45 boinc_mmap_file
[2025-10-23 14:45:19] -rw------- 1 boinc boinc       822 Oct 23 14:45 pilotlog.txt
[2025-10-23 14:45:19] -rw------- 1 boinc boinc    415023 Oct 23 14:45 log.46771637._089785.job.log.1
[2025-10-23 14:45:19] -rw------- 1 boinc boinc       357 Oct 23 14:45 output.list
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc       620 Oct 23 14:45 runtime_log
[2025-10-23 14:45:19] -rw------- 1 boinc boinc    788480 Oct 23 14:45 result.tar.gz
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc      8740 Oct 23 14:45 runtime_log.err
[2025-10-23 14:45:19] -rw------- 1 boinc boinc       658 Oct 23 14:45 P1dLDmdYqV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaqhMDmxvnUDo.diag
[2025-10-23 14:45:19] -rw-r--r-- 1 boinc boinc     22221 Oct 23 14:45 stderr.txt
[2025-10-23 14:45:19] HITS file was successfully produced:
[2025-10-23 14:45:19] -rw------- 1 boinc boinc 205988731 Oct 23 14:44 shared/HITS.pool.root.1
[2025-10-23 14:45:19]  *** Contents of shared directory: ***
[2025-10-23 14:45:19] total 427444
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc 230318471 Oct 23 14:00 ATLAS.root_0
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc     15120 Oct 23 14:00 start_atlas.sh
[2025-10-23 14:45:19] -rw-r--r-- 2 boinc boinc    569675 Oct 23 14:00 input.tar.gz
[2025-10-23 14:45:19] -rw------- 1 boinc boinc 205988731 Oct 23 14:44 HITS.pool.root.1
[2025-10-23 14:45:19] -rw------- 1 boinc boinc    788480 Oct 23 14:45 result.tar.gz
14:45:20 (2227409): run_atlas exited; CPU time 28361.813055
14:45:20 (2227409): called boinc_finish(0)

</stderr_txt>
]]>

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