Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:50 (2480362): wrapper (7.7.26015): starting
19:00:50 (2480362): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 19:00:50] Arguments: --nthreads 8
[2025-10-22 19:00:50] Threads: 8
[2025-10-22 19:00:50] Checking for CVMFS
[2025-10-22 19:00:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 19:00:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 19:00:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 19:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 19:00:51] 2.13.2.0 7534 92369 143144 152013 0 686 37970830 40960001 29377 16776704 0 581975858 99.781 320808768 44678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 19:00:51] CVMFS is ok
[2025-10-22 19:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 19:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 19:00:51] Further information can be found at the LHC@home message board.
[2025-10-22 19:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 19:00:51] Checking for apptainer binary...
[2025-10-22 19:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 19:00:51] Running /usr/bin/apptainer --version
[2025-10-22 19:00:51] apptainer version 1.4.3-1.el9
[2025-10-22 19:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 19:00:52] c-208-39.aglt2.org
[2025-10-22 19:00:52] apptainer works
[2025-10-22 19:00:52] Set ATHENA_PROC_NUMBER=8
[2025-10-22 19:00:52] Set ATHENA_CORE_NUMBER=8
[2025-10-22 19:00:52] Starting ATLAS job with PandaID=6853699555
[2025-10-22 19:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 20:41:00]  *** The last 200 lines of the pilot log: ***
[2025-10-22 20:41:00] 2025-10-23 00:39:56,578 | INFO     | monitor loop #387: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:39:56,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:39:58,280 | INFO     | time since job start (5895s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:39:59,086 | INFO     | monitor loop #388: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:39:59,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:00,287 | INFO     | time since job start (5897s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:01,595 | INFO     | monitor loop #389: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:01,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:02,293 | INFO     | time since job start (5899s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:04,118 | INFO     | monitor loop #390: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:04,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:04,302 | INFO     | time since job start (5901s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:06,263 | INFO     | PID=2506470 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 20:41:00] 2025-10-23 00:40:06,263 | INFO     | .. there are 25 such processes running
[2025-10-22 20:41:00] 2025-10-23 00:40:06,623 | INFO     | monitor loop #391: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:06,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:07,274 | INFO     | time since job start (5904s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:09,129 | INFO     | monitor loop #392: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:09,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:09,282 | INFO     | time since job start (5906s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:11,289 | INFO     | time since job start (5908s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:11,642 | INFO     | monitor loop #393: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:11,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:13,296 | INFO     | time since job start (5910s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:14,152 | INFO     | monitor loop #394: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:14,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:15,309 | INFO     | time since job start (5912s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:16,659 | INFO     | monitor loop #395: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:16,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:17,317 | INFO     | time since job start (5914s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:19,173 | INFO     | monitor loop #396: job 0:6853699555 is in state 'finished'
[2025-10-22 20:41:00] 2025-10-23 00:40:19,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 20:41:00] 2025-10-23 00:40:19,325 | INFO     | time since job start (5916s) is within the limit (172800.0s)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,657 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-22 20:41:00] 2025-10-23 00:40:20,666 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3712.616453125
[2025-10-22 20:41:00] 2025-10-23 00:40:20,691 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6853699555/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,692 | INFO     | extracted standard info from prmon json
[2025-10-22 20:41:00] 2025-10-23 00:40:20,692 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 20:41:00] 2025-10-23 00:40:20,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 20:41:00] 2025-10-23 00:40:20,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 20:41:00] 2025-10-23 00:40:20,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 20:41:00] 2025-10-23 00:40:20,697 | INFO     | fitting pss+swap vs Time
[2025-10-22 20:41:00] 2025-10-23 00:40:20,697 | INFO     | sum of square deviations: 211278873.59090862
[2025-10-22 20:41:00] 2025-10-23 00:40:20,697 | INFO     | sum of deviations: 2107235220.2499974
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | mean x: 1761177179.5681818
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | mean y: 2487593.875
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | -- intersect: -17562991238.96142
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | intersect: -17562991238.96142
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | chi2: 0.014034295843918167
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | -- intersect: -17562991238.96142
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | current memory leak: 9.97 B/s (using 88 data points, chi2=0.01)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | could have reported an average CPU frequency of 3692 MHz (7 samples)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | ..............................
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . Timing measurements:
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . get job = 0 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . initial setup = 3 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . payload setup = 34 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . stage-in = 0 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . payload execution = 5794 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . stage-out = 3 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | . log creation = 0 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,698 | INFO     | ..............................
[2025-10-22 20:41:00] 2025-10-23 00:40:20,825 | INFO     | 
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | job summary report
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | --------------------------------------------------
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | PanDA job id: 6853699555
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | task id: 46771637
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | errors: (none)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | pilot state: finished 
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | transexitcode: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | exeerrorcode: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | exeerrordiag: 
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | exitcode: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | exitmsg: OK
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | cpuconsumptiontime: 26712 s
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | nevents: 400
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | neventsw: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | pid: 2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | pgrp: 2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | corecount: 8
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | event service: False
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | sizes: {0: 2348931, 11: 2348931, 22: 2348959, 23: 2349249, 33: 2349277, 5829: 2376065, 5830: 2376192, 5834: 2385246, 5835: 2385302, 5864: 2385496}
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | --------------------------------------------------
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | 
[2025-10-22 20:41:00] 2025-10-23 00:40:20,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | job 6853699555 has completed (purged errors)
[2025-10-22 20:41:00] 2025-10-23 00:40:20,889 | INFO     | overall cleanup function is called
[2025-10-22 20:41:00] 2025-10-23 00:40:21,901 | INFO     | --- collectZombieJob: --- 10, [2533352]
[2025-10-22 20:41:00] 2025-10-23 00:40:21,901 | INFO     | zombie collector waiting for pid 2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:21,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 20:41:00] 2025-10-23 00:40:21,901 | INFO     | collected zombie processes
[2025-10-22 20:41:00] 2025-10-23 00:40:21,901 | INFO     | will attempt to kill all subprocesses of pid=2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:22,748 | INFO     | process IDs to be killed: [2533352] (in reverse order)
[2025-10-22 20:41:00] 2025-10-23 00:40:23,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 20:41:00] 2025-10-23 00:40:23,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 20:41:00] 2025-10-23 00:40:23,435 | INFO     | did not find any defunct processes belonging to 2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:23,456 | INFO     | did not find any defunct processes belonging to 2533352
[2025-10-22 20:41:00] 2025-10-23 00:40:23,456 | INFO     | ready for new job
[2025-10-22 20:41:00] 2025-10-23 00:40:23,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 20:41:00] 2025-10-23 00:40:23,457 | INFO     | ***************************************
[2025-10-22 20:41:00] 2025-10-23 00:40:23,458 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 20:41:00] 2025-10-23 00:40:23,458 | INFO     | ***************************************
[2025-10-22 20:41:00] 2025-10-23 00:40:23,458 | INFO     | 
[2025-10-22 20:41:00] 2025-10-23 00:40:23,462 | INFO     | architecture information:
[2025-10-22 20:41:00] 2025-10-23 00:40:23,462 | INFO     | executing command: cat /etc/os-release
[2025-10-22 20:41:00] 2025-10-23 00:40:23,477 | INFO     | cat /etc/os-release:
[2025-10-22 20:41:00] NAME="CentOS Linux"
[2025-10-22 20:41:00] VERSION="7 (Core)"
[2025-10-22 20:41:00] ID="centos"
[2025-10-22 20:41:00] ID_LIKE="rhel fedora"
[2025-10-22 20:41:00] VERSION_ID="7"
[2025-10-22 20:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 20:41:00] ANSI_COLOR="0;31"
[2025-10-22 20:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 20:41:00] HOME_URL="https://www.centos.org/"
[2025-10-22 20:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 20:41:00] 
[2025-10-22 20:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 20:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 20:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 20:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 20:41:00] 
[2025-10-22 20:41:00] 2025-10-23 00:40:23,477 | INFO     | ***************************************
[2025-10-22 20:41:00] 2025-10-23 00:40:23,980 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-22 20:41:00] 2025-10-23 00:40:24,194 | INFO     | sufficient remaining disk space (169669033984 B)
[2025-10-22 20:41:00] 2025-10-23 00:40:24,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 20:41:00] 2025-10-23 00:40:24,194 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 20:41:00] 2025-10-23 00:40:24,195 | INFO     | update_server=False
[2025-10-22 20:41:00] 2025-10-23 00:40:24,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 20:41:00] 2025-10-23 00:40:24,197 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 20:41:00] 2025-10-23 00:40:24,197 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 20:41:00] 2025-10-23 00:40:24,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 20:41:00] 2025-10-23 00:40:24,197 | INFO     | will abort loop
[2025-10-22 20:41:00] 2025-10-23 00:40:24,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 20:41:00] 2025-10-23 00:40:24,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 20:41:00] 2025-10-23 00:40:24,576 | INFO     | all data control threads have been joined
[2025-10-22 20:41:00] 2025-10-23 00:40:25,201 | INFO     | [job] retrieve thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,203 | INFO     | [job] job monitor thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,392 | INFO     | all job control threads have been joined
[2025-10-22 20:41:00] 2025-10-23 00:40:25,582 | INFO     | [data] control thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,598 | INFO     | [job] validate thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,602 | INFO     | [data] copytool_in thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,610 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,612 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,700 | INFO     | all payload control threads have been joined
[2025-10-22 20:41:00] 2025-10-23 00:40:25,815 | INFO     | [payload] failed_post thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,822 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:25,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 20:41:00] 2025-10-23 00:40:26,379 | INFO     | [data] copytool_out thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:26,398 | INFO     | [job] control thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:26,449 | INFO     | [payload] validate_post thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:26,706 | INFO     | [payload] control thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:26,848 | INFO     | [job] queue monitor thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:28,518 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:34,592 | INFO     | job.realtimelogging is not enabled
[2025-10-22 20:41:00] 2025-10-23 00:40:35,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 20:41:00] 2025-10-23 00:40:53,022 | INFO     | PID=2506470 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 20:41:00] 2025-10-23 00:40:53,023 | INFO     | .. there are 25 such processes running
[2025-10-22 20:41:00] 2025-10-23 00:40:53,024 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 20:41:00] 2025-10-23 00:40:53,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 20:41:00] 2025-10-23 00:40:53,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 20:41:00] 2025-10-23 00:40:53,301 | INFO     | [monitor] cgroup control has ended
[2025-10-22 20:41:00] 2025-10-23 00:40:53,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702734931776)>', '<ExcThread(monitor, started 139702225053440)>']
[2025-10-22 20:41:00] 2025-10-23 00:40:54,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 20:41:00] 2025-10-23 00:40:54,031 | INFO     | [monitor] control thread has ended
[2025-10-22 20:41:00] 2025-10-23 00:40:58,500 | INFO     | all workflow threads have been joined
[2025-10-22 20:41:00] 2025-10-23 00:40:58,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 20:41:00] 2025-10-23 00:40:58,508 | INFO     | traces error code: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:58,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 20:41:00] 2025-10-23 00:40:58,912 [wrapper] ==== pilot stdout END ====
[2025-10-22 20:41:00] 2025-10-23 00:40:58,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 20:41:00] 2025-10-23 00:40:58,954 [wrapper] pilotpid: 2506470
[2025-10-22 20:41:00] 2025-10-23 00:40:58,969 [wrapper] Pilot exit status: 0
[2025-10-22 20:41:00] 2025-10-23 00:40:59,099 [wrapper] pandaids: 6853699555
[2025-10-22 20:41:00] 2025-10-23 00:40:59,632 [wrapper] cleanup supervisor_pilot 3019080 2506472
[2025-10-22 20:41:00] 2025-10-23 00:40:59,648 [wrapper] Test setup, not cleaning
[2025-10-22 20:41:00] 2025-10-23 00:40:59,671 [wrapper] apfmon messages muted
[2025-10-22 20:41:00] 2025-10-23 00:40:59,706 [wrapper] ==== wrapper stdout END ====
[2025-10-22 20:41:00] 2025-10-23 00:40:59,749 [wrapper] ==== wrapper stderr END ====
[2025-10-22 20:41:00]  *** Error codes and diagnostics ***
[2025-10-22 20:41:00]     "exeErrorCode": 0,
[2025-10-22 20:41:00]     "exeErrorDiag": "",
[2025-10-22 20:41:00]     "pilotErrorCode": 0,
[2025-10-22 20:41:00]     "pilotErrorDiag": "",
[2025-10-22 20:41:00]  *** Listing of results directory ***
[2025-10-22 20:41:00] total 430756
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 11:53 pilot3.tar.gz
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 11:55 queuedata.json
[2025-10-22 20:41:00] -rwx------. 1 boincer umatlas     36292 Oct 22 11:56 runpilot2-wrapper.sh
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas       100 Oct 22 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 20:41:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 22 19:00 run_atlas
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas       105 Oct 22 19:00 job.xml
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas 227042668 Oct 22 19:00 EVNT.46771634._003653.pool.root.1
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 19:00 start_atlas.sh
[2025-10-22 20:41:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 22 19:00 shared
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas    569679 Oct 22 19:00 input.tar.gz
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas         0 Oct 22 19:00 boinc_lockfile
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas      2560 Oct 22 19:00 pandaJob.out
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas    978084 Oct 22 19:01 agis_schedconf.cvmfs.json
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas   1560740 Oct 22 19:01 agis_ddmendpoints.agis.ALL.json
[2025-10-22 20:41:00] drwx------. 5 boincer umatlas      4096 Oct 22 19:01 pilot3
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas      7174 Oct 22 20:36 init_data.xml
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas 207867201 Oct 22 20:38 HITS.46771637._089513.pool.root.1
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas       530 Oct 22 20:39 boinc_task_state.xml
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas      1047 Oct 22 20:39 memory_monitor_summary.json
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas    345720 Oct 22 20:39 log.46771637._089513.job.log.tgz.1
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas      7803 Oct 22 20:40 heartbeat.json
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas        95 Oct 22 20:40 pilot_heartbeat.json
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 22 20:40 boinc_mmap_file
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas        27 Oct 22 20:40 wrapper_checkpoint.txt
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas      5083 Oct 22 20:40 pilotlog.txt
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas    796160 Oct 22 20:40 log.46771637._089513.job.log.1
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas       357 Oct 22 20:41 output.list
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas       620 Oct 22 20:41 runtime_log
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas   1157120 Oct 22 20:41 result.tar.gz
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas      8703 Oct 22 20:41 runtime_log.err
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas       656 Oct 22 20:41 k7UMDmSNqV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml75NDmG0iYCn.diag
[2025-10-22 20:41:00] -rw-r--r--. 1 boincer umatlas     22305 Oct 22 20:41 stderr.txt
[2025-10-22 20:41:00] HITS file was successfully produced:
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas 207867201 Oct 22 20:38 shared/HITS.pool.root.1
[2025-10-22 20:41:00]  *** Contents of shared directory: ***
[2025-10-22 20:41:00] total 426432
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas 227042668 Oct 22 19:00 ATLAS.root_0
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 19:00 start_atlas.sh
[2025-10-22 20:41:00] -rw-r--r--. 2 boincer umatlas    569679 Oct 22 19:00 input.tar.gz
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas 207867201 Oct 22 20:38 HITS.pool.root.1
[2025-10-22 20:41:00] -rw-------. 1 boincer umatlas   1157120 Oct 22 20:41 result.tar.gz
20:41:01 (2480362): run_atlas exited; CPU time 26867.838063
20:41:01 (2480362): called boinc_finish(0)

</stderr_txt>
]]>

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