Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
02:59:25 (25269): wrapper (7.7.26015): starting
02:59:25 (25269): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 02:59:25] Arguments: --nthreads 8
[2025-10-23 02:59:25] Threads: 8
[2025-10-23 02:59:25] Checking for CVMFS
[2025-10-23 02:59:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 02:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 02:59:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 02:59:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 02:59:26] 2.11.0.0 4219 16440 73736 152015 0 188 3056747 4096001 1768 130560 0 2337626 99.553 2006113 718 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-23 02:59:26] CVMFS is ok
[2025-10-23 02:59:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 02:59:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 02:59:26] Further information can be found at the LHC@home message board.
[2025-10-23 02:59:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 02:59:26] Checking for apptainer binary...
[2025-10-23 02:59:26] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-23 02:59:26] apptainer is not installed, using version from CVMFS
[2025-10-23 02:59:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 02:59:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_10709265/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node302
[2025-10-23 02:59:26] apptainer works
[2025-10-23 02:59:26] Set ATHENA_PROC_NUMBER=8
[2025-10-23 02:59:26] Set ATHENA_CORE_NUMBER=8
[2025-10-23 02:59:26] Starting ATLAS job with PandaID=6853624478
[2025-10-23 02:59:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10709265/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 03:55:42]  *** The last 200 lines of the pilot log: ***
[2025-10-23 03:55:42]  status=None
[2025-10-23 03:55:42]  status_code=0
[2025-10-23 03:55:42]  storage_token=
[2025-10-23 03:55:42]  surl=/tmp/job_10709265/atlas/pilot/slots/0/PanDA_Pilot-6853624478/log.46771637._088194.job.log.tgz.1
[2025-10-23 03:55:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/b3/log.46771637._088194.job.log.tgz.1
[2025-10-23 03:55:42]  workdir=None
[2025-10-23 03:55:42] ]
[2025-10-23 03:55:42] 2025-10-23 01:55:14,402 | INFO     | transferring file log.46771637._088194.job.log.tgz.1 from /tmp/job_10709265/atlas/pilot/slots/0/PanDA_Pilot-6853624478/log.46771637._088194.job.log.tgz.1 to /tmp/j
[2025-10-23 03:55:42] 2025-10-23 01:55:14,402 | INFO     | executing command: /usr/bin/env mv /tmp/job_10709265/atlas/pilot/slots/0/PanDA_Pilot-6853624478/log.46771637._088194.job.log.tgz.1 /tmp/job_10709265/atlas/pilot/sl
[2025-10-23 03:55:42] 2025-10-23 01:55:14,410 | INFO     | adding to output.list: log.46771637._088194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/b3/log.46771637._088194.job.log.tg
[2025-10-23 03:55:42] 2025-10-23 01:55:14,410 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 03:55:42] 2025-10-23 01:55:14,410 | INFO     | summary of transferred files:
[2025-10-23 03:55:42] 2025-10-23 01:55:14,410 | INFO     |  -- lfn=log.46771637._088194.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 03:55:42] 2025-10-23 01:55:14,411 | INFO     | stage-out finished correctly
[2025-10-23 03:55:42] 2025-10-23 01:55:14,439 | INFO     | time since job start (3343s) is within the limit (172800.0s)
[2025-10-23 03:55:42] 2025-10-23 01:55:15,342 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 03:55:42] 2025-10-23 01:55:16,455 | INFO     | time since job start (3345s) is within the limit (172800.0s)
[2025-10-23 03:55:42] 2025-10-23 01:55:17,256 | WARNING  | process 13330 can no longer be monitored (due to stat problems) - aborting
[2025-10-23 03:55:42] 2025-10-23 01:55:17,256 | INFO     | using path: /tmp/job_10709265/atlas/pilot/slots/0/PanDA_Pilot-6853624478/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 03:55:42] 2025-10-23 01:55:17,348 | INFO     | number of running child processes to parent process 13330: 1
[2025-10-23 03:55:42] 2025-10-23 01:55:17,348 | INFO     | maximum number of monitored processes: 6
[2025-10-23 03:55:42] 2025-10-23 01:55:17,987 | INFO     | job 6853624478 has state=finished
[2025-10-23 03:55:42] 2025-10-23 01:55:17,987 | INFO     | preparing for final server update for job 6853624478 in state='finished'
[2025-10-23 03:55:42] 2025-10-23 01:55:18,460 | INFO     | time since job start (3347s) is within the limit (172800.0s)
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | this job has now completed (state=finished)
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | log transfer has been attempted: DONE
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | job 6853624478 has finished - writing final server update
[2025-10-23 03:55:42] 2025-10-23 01:55:18,569 | INFO     | total number of processed events: 400 (read)
[2025-10-23 03:55:42] 2025-10-23 01:55:18,570 | INFO     | executing command: lscpu
[2025-10-23 03:55:42] 2025-10-23 01:55:18,601 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 03:55:42] 2025-10-23 01:55:19,850 | INFO     | monitor loop #253: job 0:6853624478 is in state 'finished'
[2025-10-23 03:55:42] 2025-10-23 01:55:19,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,465 | INFO     | time since job start (3349s) is within the limit (172800.0s)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,615 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 03:55:42] 2025-10-23 01:55:20,619 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2505.910125
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | INFO     | using path: /tmp/job_10709265/atlas/pilot/slots/0/PanDA_Pilot-6853624478/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | INFO     | extracted standard info from prmon json
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 03:55:42] 2025-10-23 01:55:20,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | fitting pss+swap vs Time
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | sum of square deviations: 34277852.0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | sum of deviations: -688858970.0000001
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | mean x: 1761182928.5
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | mean y: 2550160.8333333335
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | -- intersect: 35395860631.6322
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | intersect: 35395860631.6322
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | chi2: 0.008401272021818396
[2025-10-23 03:55:42] 2025-10-23 01:55:20,626 | INFO     | -- intersect: 35395860631.6322
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | current memory leak: -20.10 B/s (using 48 data points, chi2=0.01)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | could have reported an average CPU frequency of 2596 MHz (5 samples)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | ..............................
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . Timing measurements:
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . get job = 0 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . initial setup = 1 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . payload setup = 2 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . stage-in = 0 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . payload execution = 3323 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . stage-out = 0 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | . log creation = 0 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,627 | INFO     | ..............................
[2025-10-23 03:55:42] 2025-10-23 01:55:20,879 | INFO     | 
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | job summary report
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | --------------------------------------------------
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | PanDA job id: 6853624478
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | task id: 46771637
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | errors: (none)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | pilot state: finished 
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | transexitcode: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | exeerrorcode: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | exeerrordiag: 
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | exitcode: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | exitmsg: OK
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | cpuconsumptiontime: 22094 s
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | nevents: 400
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | neventsw: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | pid: 13330
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | pgrp: 13330
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | corecount: 8
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | event service: False
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | sizes: {0: 2349057, 2: 2349319, 11: 2349347, 3329: 2375080, 3330: 2384108, 3331: 2384164, 3336: 2384518}
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | --------------------------------------------------
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | 
[2025-10-23 03:55:42] 2025-10-23 01:55:20,880 | INFO     | executing command: ls -lF /tmp/job_10709265/atlas/pilot/slots/0
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | job 6853624478 has completed (purged errors)
[2025-10-23 03:55:42] 2025-10-23 01:55:20,890 | INFO     | overall cleanup function is called
[2025-10-23 03:55:42] 2025-10-23 01:55:21,597 | INFO     | PID=29990 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 03:55:42] 2025-10-23 01:55:21,597 | INFO     | .. there are 3 such processes running
[2025-10-23 03:55:42] 2025-10-23 01:55:21,896 | INFO     | --- collectZombieJob: --- 10, [13330]
[2025-10-23 03:55:42] 2025-10-23 01:55:21,896 | INFO     | zombie collector waiting for pid 13330
[2025-10-23 03:55:42] 2025-10-23 01:55:21,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 03:55:42] 2025-10-23 01:55:21,896 | INFO     | collected zombie processes
[2025-10-23 03:55:42] 2025-10-23 01:55:21,896 | INFO     | will attempt to kill all subprocesses of pid=13330
[2025-10-23 03:55:42] 2025-10-23 01:55:21,994 | INFO     | process IDs to be killed: [13330] (in reverse order)
[2025-10-23 03:55:42] 2025-10-23 01:55:22,027 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 03:55:42] 2025-10-23 01:55:22,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 03:55:42] 2025-10-23 01:55:22,031 | INFO     | did not find any defunct processes belonging to 13330
[2025-10-23 03:55:42] 2025-10-23 01:55:22,034 | INFO     | did not find any defunct processes belonging to 13330
[2025-10-23 03:55:42] 2025-10-23 01:55:22,034 | INFO     | ready for new job
[2025-10-23 03:55:42] 2025-10-23 01:55:22,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 03:55:42] 2025-10-23 01:55:22,035 | INFO     | ***************************************
[2025-10-23 03:55:42] 2025-10-23 01:55:22,035 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 03:55:42] 2025-10-23 01:55:22,035 | INFO     | ***************************************
[2025-10-23 03:55:42] 2025-10-23 01:55:22,035 | INFO     | 
[2025-10-23 03:55:42] 2025-10-23 01:55:22,049 | INFO     | architecture information:
[2025-10-23 03:55:42] 2025-10-23 01:55:22,049 | INFO     | executing command: cat /etc/os-release
[2025-10-23 03:55:42] 2025-10-23 01:55:22,055 | INFO     | cat /etc/os-release:
[2025-10-23 03:55:42] NAME="CentOS Linux"
[2025-10-23 03:55:42] VERSION="7 (Core)"
[2025-10-23 03:55:42] ID="centos"
[2025-10-23 03:55:42] ID_LIKE="rhel fedora"
[2025-10-23 03:55:42] VERSION_ID="7"
[2025-10-23 03:55:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 03:55:42] ANSI_COLOR="0;31"
[2025-10-23 03:55:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 03:55:42] HOME_URL="https://www.centos.org/"
[2025-10-23 03:55:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 03:55:42] 
[2025-10-23 03:55:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 03:55:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 03:55:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 03:55:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 03:55:42] 
[2025-10-23 03:55:42] 2025-10-23 01:55:22,055 | INFO     | ***************************************
[2025-10-23 03:55:42] 2025-10-23 01:55:22,558 | INFO     | executing command: df -mP /tmp/job_10709265/atlas/pilot/slots/0
[2025-10-23 03:55:42] 2025-10-23 01:55:22,564 | INFO     | sufficient remaining disk space (227010412544 B)
[2025-10-23 03:55:42] 2025-10-23 01:55:22,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 03:55:42] 2025-10-23 01:55:22,564 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | INFO     | update_server=False
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 03:55:42] 2025-10-23 01:55:22,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 03:55:42] 2025-10-23 01:55:22,578 | INFO     | all payload control threads have been joined
[2025-10-23 03:55:42] 2025-10-23 01:55:22,903 | INFO     | all job control threads have been joined
[2025-10-23 03:55:42] 2025-10-23 01:55:23,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 03:55:42] 2025-10-23 01:55:23,358 | INFO     | aborting loop
[2025-10-23 03:55:42] 2025-10-23 01:55:23,565 | INFO     | [job] retrieve thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,570 | INFO     | [job] queue monitor thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,583 | INFO     | [payload] control thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,649 | INFO     | all data control threads have been joined
[2025-10-23 03:55:42] 2025-10-23 01:55:23,682 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,684 | INFO     | [job] validate thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,723 | INFO     | [payload] validate_post thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:23,908 | INFO     | [job] control thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,276 | INFO     | [data] copytool_in thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,363 | INFO     | [job] job monitor thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,570 | INFO     | [data] copytool_out thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,654 | INFO     | [data] control thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:24,737 | INFO     | [payload] failed_post thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:25,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 03:55:42] 2025-10-23 01:55:29,906 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 03:55:42] 2025-10-23 01:55:36,243 | INFO     | [monitor] cgroup control has ended
[2025-10-23 03:55:42] 2025-10-23 01:55:36,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064669440)>']
[2025-10-23 03:55:42] 2025-10-23 01:55:37,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 03:55:42] 2025-10-23 01:55:37,640 | INFO     | [monitor] control thread has ended
[2025-10-23 03:55:42] 2025-10-23 01:55:41,935 | INFO     | all workflow threads have been joined
[2025-10-23 03:55:42] 2025-10-23 01:55:41,935 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 03:55:42] 2025-10-23 01:55:41,935 | INFO     | traces error code: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:41,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 03:55:42] 2025-10-23 01:55:41,988 [wrapper] ==== pilot stdout END ====
[2025-10-23 03:55:42] 2025-10-23 01:55:41,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 03:55:42] 2025-10-23 01:55:41,990 [wrapper] pilotpid: 29990
[2025-10-23 03:55:42] 2025-10-23 01:55:41,992 [wrapper] Pilot exit status: 0
[2025-10-23 03:55:42] 2025-10-23 01:55:41,996 [wrapper] pandaids: 6853624478
[2025-10-23 03:55:42] 2025-10-23 01:55:42,018 [wrapper] cleanup supervisor_pilot 27512 29991
[2025-10-23 03:55:42] 2025-10-23 01:55:42,019 [wrapper] Test setup, not cleaning
[2025-10-23 03:55:42] 2025-10-23 01:55:42,021 [wrapper] apfmon messages muted
[2025-10-23 03:55:42] 2025-10-23 01:55:42,022 [wrapper] ==== wrapper stdout END ====
[2025-10-23 03:55:42] 2025-10-23 01:55:42,023 [wrapper] ==== wrapper stderr END ====
[2025-10-23 03:55:42]  *** Error codes and diagnostics ***
[2025-10-23 03:55:42]     "exeErrorCode": 0,
[2025-10-23 03:55:42]     "exeErrorDiag": "",
[2025-10-23 03:55:42]     "pilotErrorCode": 0,
[2025-10-23 03:55:42]     "pilotErrorDiag": "",
[2025-10-23 03:55:42]  *** Listing of results directory ***
[2025-10-23 03:55:42] total 431164
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    557409 Oct 22 15:50 pilot3.tar.gz
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      5112 Oct 22 16:06 queuedata.json
[2025-10-23 03:55:42] -rwx------ 1 mf493845 unix-user     36292 Oct 22 16:10 runpilot2-wrapper.sh
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user       100 Oct 23 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 03:55:42] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 23 02:01 run_atlas
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user       105 Oct 23 02:01 job.xml
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user 227413368 Oct 23 02:59 EVNT.46771634._003600.pool.root.1
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 23 02:59 start_atlas.sh
[2025-10-23 03:55:42] drwxrwx--x 2 mf493845 unix-user       100 Oct 23 02:59 shared
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user    569678 Oct 23 02:59 input.tar.gz
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      6393 Oct 23 02:59 init_data.xml
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user         0 Oct 23 02:59 boinc_setup_complete
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      8192 Oct 23 02:59 boinc_mmap_file
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user         0 Oct 23 02:59 boinc_lockfile
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      2560 Oct 23 02:59 pandaJob.out
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    978092 Oct 23 02:59 agis_schedconf.cvmfs.json
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user   1560740 Oct 23 02:59 agis_ddmendpoints.agis.ALL.json
[2025-10-23 03:55:42] drwx------ 5 mf493845 unix-user       440 Oct 23 02:59 pilot3
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user 208539143 Oct 23 03:54 HITS.46771637._088194.pool.root.1
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user        95 Oct 23 03:54 pilot_heartbeat.json
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      1011 Oct 23 03:55 memory_monitor_summary.json
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    319107 Oct 23 03:55 log.46771637._088194.job.log.tgz.1
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      7765 Oct 23 03:55 heartbeat.json
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      4566 Oct 23 03:55 pilotlog.txt
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    524906 Oct 23 03:55 log.46771637._088194.job.log.1
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user       357 Oct 23 03:55 output.list
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user       620 Oct 23 03:55 runtime_log
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    860160 Oct 23 03:55 result.tar.gz
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user      9076 Oct 23 03:55 runtime_log.err
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user       641 Oct 23 03:55 MDbMDmXioV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmhhMDmUi6oem.diag
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user     22518 Oct 23 03:55 stderr.txt
[2025-10-23 03:55:42] HITS file was successfully produced:
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user 208539143 Oct 23 03:54 shared/HITS.pool.root.1
[2025-10-23 03:55:42]  *** Contents of shared directory: ***
[2025-10-23 03:55:42] total 427152
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user 227413368 Oct 23 02:59 ATLAS.root_0
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 23 02:59 start_atlas.sh
[2025-10-23 03:55:42] -rw-r--r-- 2 mf493845 unix-user    569678 Oct 23 02:59 input.tar.gz
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user 208539143 Oct 23 03:54 HITS.pool.root.1
[2025-10-23 03:55:42] -rw------- 1 mf493845 unix-user    860160 Oct 23 03:55 result.tar.gz
03:55:43 (25269): run_atlas exited; CPU time 22139.446073
03:55:43 (25269): called boinc_finish(0)

</stderr_txt>
]]>

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