Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:47 (32705): wrapper (7.7.26015): starting
09:50:47 (32705): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 09:50:47] Arguments: --nthreads 8
[2025-10-23 09:50:47] Threads: 8
[2025-10-23 09:50:47] Checking for CVMFS
[2025-10-23 09:50:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 09:50:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 09:50:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 09:50:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 09:50:50] 2.11.2.0 4554 236137 143352 152029 0 60 18848153 25165824 4632 130560 0 110548626 99.850 74714105 3348 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-23 09:50:50] CVMFS is ok
[2025-10-23 09:50:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 09:50:50] Checking for apptainer binary...
[2025-10-23 09:50:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 09:50:50] Running /usr/bin/apptainer --version
[2025-10-23 09:50:50] apptainer version 1.3.2-1.el7
[2025-10-23 09:50:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 09:50:55] cg-vwn316.simple-grid.lan
[2025-10-23 09:50:55] apptainer works
[2025-10-23 09:50:55] Set ATHENA_PROC_NUMBER=8
[2025-10-23 09:50:55] Set ATHENA_CORE_NUMBER=8
[2025-10-23 09:50:55] Starting ATLAS job with PandaID=6853624847
[2025-10-23 09:50:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 14:39:20]  *** The last 200 lines of the pilot log: ***
[2025-10-23 14:39:20] 2025-10-23 12:38:41,001 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 14:39:20] 2025-10-23 12:38:41,007 | INFO     | fitting pss+swap vs Time
[2025-10-23 14:39:20] 2025-10-23 12:38:41,008 | INFO     | sum of square deviations: 6103286527.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,010 | INFO     | sum of deviations: 130094735197.00002
[2025-10-23 14:39:20] 2025-10-23 12:38:41,010 | INFO     | mean x: 1761214761.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,011 | INFO     | mean y: 2435762.3407407408
[2025-10-23 14:39:20] 2025-10-23 12:38:41,011 | INFO     | -- intersect: -37538775352.36061
[2025-10-23 14:39:20] 2025-10-23 12:38:41,011 | INFO     | intersect: -37538775352.36061
[2025-10-23 14:39:20] 2025-10-23 12:38:41,011 | INFO     | chi2: 6.506696786063706
[2025-10-23 14:39:20] 2025-10-23 12:38:41,012 | INFO     | sum of square deviations: 5770452380.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,014 | INFO     | sum of deviations: 145417728101.99997
[2025-10-23 14:39:20] 2025-10-23 12:38:41,015 | INFO     | mean x: 1761214609.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,015 | INFO     | mean y: 2442659.7924528304
[2025-10-23 14:39:20] 2025-10-23 12:38:41,015 | INFO     | -- intersect: -44380876060.33053
[2025-10-23 14:39:20] 2025-10-23 12:38:41,015 | INFO     | intersect: -44380876060.33053
[2025-10-23 14:39:20] 2025-10-23 12:38:41,015 | INFO     | chi2: 5.773782277767393
[2025-10-23 14:39:20] 2025-10-23 12:38:41,016 | INFO     | current chi2=5.773782277767393 (change=11.264002801945498 %)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,016 | INFO     | right removable region: 264
[2025-10-23 14:39:20] 2025-10-23 12:38:41,016 | INFO     | sum of square deviations: 5770452380.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,019 | INFO     | sum of deviations: 38202401009.00001
[2025-10-23 14:39:20] 2025-10-23 12:38:41,019 | INFO     | mean x: 1761214914.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,019 | INFO     | mean y: 2477830.403773585
[2025-10-23 14:39:20] 2025-10-23 12:38:41,019 | INFO     | -- intersect: -11657377234.141348
[2025-10-23 14:39:20] 2025-10-23 12:38:41,019 | INFO     | intersect: -11657377234.141348
[2025-10-23 14:39:20] 2025-10-23 12:38:41,020 | INFO     | chi2: 1.9497624485536567
[2025-10-23 14:39:20] 2025-10-23 12:38:41,020 | INFO     | current chi2=1.9497624485536567 (change=70.03452730839199 %)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,020 | INFO     | sum of square deviations: 5449944045.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,023 | INFO     | sum of deviations: -4561936667.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,023 | INFO     | mean x: 1761215066.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,023 | INFO     | mean y: 2498071.207692308
[2025-10-23 14:39:20] 2025-10-23 12:38:41,023 | INFO     | -- intersect: 1476742856.8418527
[2025-10-23 14:39:20] 2025-10-23 12:38:41,023 | INFO     | intersect: 1476742856.8418527
[2025-10-23 14:39:20] 2025-10-23 12:38:41,024 | INFO     | chi2: 0.8033682260068242
[2025-10-23 14:39:20] 2025-10-23 12:38:41,024 | INFO     | current chi2=0.8033682260068242 (change=58.79660998688499 %)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,024 | INFO     | sum of square deviations: 5141528960.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,027 | INFO     | sum of deviations: -7069273042.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,027 | INFO     | mean x: 1761215219.0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,027 | INFO     | mean y: 2499312.2392156865
[2025-10-23 14:39:20] 2025-10-23 12:38:41,027 | INFO     | -- intersect: 2424057445.1796603
[2025-10-23 14:39:20] 2025-10-23 12:38:41,027 | INFO     | intersect: 2424057445.1796603
[2025-10-23 14:39:20] 2025-10-23 12:38:41,028 | INFO     | chi2: 0.7962243456736743
[2025-10-23 14:39:20] 2025-10-23 12:38:41,028 | INFO     | current chi2=0.7962243456736743 (change=0.8892410854557821 %)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,028 | INFO     | left removable region: 30
[2025-10-23 14:39:20] 2025-10-23 12:38:41,028 | INFO     | sum of square deviations: 3972995422.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,030 | INFO     | sum of deviations: 3647609832.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,030 | INFO     | mean x: 1761215493.5
[2025-10-23 14:39:20] 2025-10-23 12:38:41,030 | INFO     | mean y: 2511304.9017094015
[2025-10-23 14:39:20] 2025-10-23 12:38:41,031 | INFO     | -- intersect: -1614461852.1424806
[2025-10-23 14:39:20] 2025-10-23 12:38:41,031 | INFO     | intersect: -1614461852.1424806
[2025-10-23 14:39:20] 2025-10-23 12:38:41,031 | INFO     | chi2: 0.0004601402597998588
[2025-10-23 14:39:20] 2025-10-23 12:38:41,031 | INFO     | -- intersect: -1614461852.1424806
[2025-10-23 14:39:20] 2025-10-23 12:38:41,031 | INFO     | current memory leak: 0.92 B/s (using 234 data points, chi2=0.00)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,032 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,032 | INFO     | ..............................
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . Timing measurements:
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . get job = 0 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . initial setup = 7 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . payload setup = 117 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . stage-in = 0 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . payload execution = 16616 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . stage-out = 3 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | . log creation = 1 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,033 | INFO     | ..............................
[2025-10-23 14:39:20] 2025-10-23 12:38:41,065 | INFO     | time since job start (17040s) is within the limit (172800.0s)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,198 | INFO     | 
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | job summary report
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | --------------------------------------------------
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | PanDA job id: 6853624847
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | task id: 46771637
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | errors: (none)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | pilot state: finished 
[2025-10-23 14:39:20] 2025-10-23 12:38:41,199 | INFO     | transexitcode: 0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | exeerrorcode: 0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | exeerrordiag: 
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | exitcode: 0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | exitmsg: OK
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | cpuconsumptiontime: 62118 s
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | nevents: 400
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | neventsw: 0
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | pid: 10681
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | pgrp: 10681
[2025-10-23 14:39:20] 2025-10-23 12:38:41,200 | INFO     | corecount: 8
[2025-10-23 14:39:20] 2025-10-23 12:38:41,201 | INFO     | event service: False
[2025-10-23 14:39:20] 2025-10-23 12:38:41,201 | INFO     | sizes: {0: 2348103, 1: 2348960, 2: 2348988, 12: 2348988, 23: 2349016, 34: 2349044, 45: 2349200, 55: 2349228, 66: 2349256, 77: 2349284, 88: 2349340, 91: 2349910, 98
[2025-10-23 14:39:20] 2025-10-23 12:38:41,201 | INFO     | --------------------------------------------------
[2025-10-23 14:39:20] 2025-10-23 12:38:41,201 | INFO     | 
[2025-10-23 14:39:20] 2025-10-23 12:38:41,201 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 14:39:20] 2025-10-23 12:38:41,261 | INFO     | job 6853624847 has completed (purged errors)
[2025-10-23 14:39:20] 2025-10-23 12:38:41,261 | INFO     | overall cleanup function is called
[2025-10-23 14:39:20] 2025-10-23 12:38:42,270 | INFO     | --- collectZombieJob: --- 10, [10681]
[2025-10-23 14:39:20] 2025-10-23 12:38:42,271 | INFO     | zombie collector waiting for pid 10681
[2025-10-23 14:39:20] 2025-10-23 12:38:42,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 14:39:20] 2025-10-23 12:38:42,271 | INFO     | collected zombie processes
[2025-10-23 14:39:20] 2025-10-23 12:38:42,271 | INFO     | will attempt to kill all subprocesses of pid=10681
[2025-10-23 14:39:20] 2025-10-23 12:38:42,374 | INFO     | process IDs to be killed: [10681] (in reverse order)
[2025-10-23 14:39:20] 2025-10-23 12:38:43,081 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 14:39:20] 2025-10-23 12:38:43,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 14:39:20] 2025-10-23 12:38:43,085 | INFO     | did not find any defunct processes belonging to 10681
[2025-10-23 14:39:20] 2025-10-23 12:38:43,089 | INFO     | did not find any defunct processes belonging to 10681
[2025-10-23 14:39:20] 2025-10-23 12:38:43,089 | INFO     | ready for new job
[2025-10-23 14:39:20] 2025-10-23 12:38:43,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 14:39:20] 2025-10-23 12:38:43,092 | INFO     | ***************************************
[2025-10-23 14:39:20] 2025-10-23 12:38:43,092 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 14:39:20] 2025-10-23 12:38:43,092 | INFO     | ***************************************
[2025-10-23 14:39:20] 2025-10-23 12:38:43,092 | INFO     | 
[2025-10-23 14:39:20] 2025-10-23 12:38:43,093 | INFO     | pilot is running in a VM
[2025-10-23 14:39:20] 2025-10-23 12:38:43,093 | INFO     | architecture information:
[2025-10-23 14:39:20] 2025-10-23 12:38:43,094 | INFO     | executing command: cat /etc/os-release
[2025-10-23 14:39:20] 2025-10-23 12:38:43,221 | INFO     | cat /etc/os-release:
[2025-10-23 14:39:20] NAME="CentOS Linux"
[2025-10-23 14:39:20] VERSION="7 (Core)"
[2025-10-23 14:39:20] ID="centos"
[2025-10-23 14:39:20] ID_LIKE="rhel fedora"
[2025-10-23 14:39:20] VERSION_ID="7"
[2025-10-23 14:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 14:39:20] ANSI_COLOR="0;31"
[2025-10-23 14:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 14:39:20] HOME_URL="https://www.centos.org/"
[2025-10-23 14:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 14:39:20] 
[2025-10-23 14:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 14:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 14:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 14:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 14:39:20] 
[2025-10-23 14:39:20] 2025-10-23 12:38:43,222 | INFO     | ***************************************
[2025-10-23 14:39:20] 2025-10-23 12:38:43,725 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-23 14:39:20] 2025-10-23 12:38:43,920 | INFO     | sufficient remaining disk space (496453550080 B)
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | INFO     | update_server=False
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 14:39:20] 2025-10-23 12:38:43,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 14:39:20] 2025-10-23 12:38:43,922 | INFO     | aborting loop
[2025-10-23 14:39:20] 2025-10-23 12:38:43,943 | INFO     | all job control threads have been joined
[2025-10-23 14:39:20] 2025-10-23 12:38:44,336 | INFO     | all payload control threads have been joined
[2025-10-23 14:39:20] 2025-10-23 12:38:44,453 | INFO     | all data control threads have been joined
[2025-10-23 14:39:20] 2025-10-23 12:38:44,928 | INFO     | [job] retrieve thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:44,928 | INFO     | [job] job monitor thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:44,950 | INFO     | [job] control thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 14:39:20] 2025-10-23 12:38:45,342 | INFO     | [payload] control thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,460 | INFO     | [data] control thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,538 | INFO     | [payload] validate_post thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,586 | INFO     | [data] copytool_in thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,928 | INFO     | [data] copytool_out thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,944 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:45,971 | INFO     | [payload] failed_post thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:46,028 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:46,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 14:39:20] 2025-10-23 12:38:46,241 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:46,242 | INFO     | [job] validate thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:47,218 | INFO     | [job] queue monitor thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:38:49,093 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 14:39:20] 2025-10-23 12:39:09,705 | INFO     | [monitor] cgroup control has ended
[2025-10-23 14:39:20] 2025-10-23 12:39:11,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748562323264)>', '<ExcThread(monitor, started 139747758434048)>']
[2025-10-23 14:39:20] 2025-10-23 12:39:14,246 | INFO     | PID=4095 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | INFO     | .. there are 9 such processes running
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 14:39:20] 2025-10-23 12:39:14,247 | INFO     | [monitor] control thread has ended
[2025-10-23 14:39:20] 2025-10-23 12:39:16,693 | INFO     | all workflow threads have been joined
[2025-10-23 14:39:20] 2025-10-23 12:39:16,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 14:39:20] 2025-10-23 12:39:16,694 | INFO     | traces error code: 0
[2025-10-23 14:39:20] 2025-10-23 12:39:16,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 14:39:20] 2025-10-23 12:39:17,037 [wrapper] ==== pilot stdout END ====
[2025-10-23 14:39:20] 2025-10-23 12:39:17,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 14:39:20] 2025-10-23 12:39:17,163 [wrapper] pilotpid: 4095
[2025-10-23 14:39:20] 2025-10-23 12:39:17,193 [wrapper] Pilot exit status: 0
[2025-10-23 14:39:20] 2025-10-23 12:39:17,638 [wrapper] pandaids: 6853624847
[2025-10-23 14:39:20] 2025-10-23 12:39:18,484 [wrapper] cleanup supervisor_pilot 27384 4096
[2025-10-23 14:39:20] 2025-10-23 12:39:18,595 [wrapper] Test setup, not cleaning
[2025-10-23 14:39:20] 2025-10-23 12:39:18,703 [wrapper] apfmon messages muted
[2025-10-23 14:39:20] 2025-10-23 12:39:18,796 [wrapper] ==== wrapper stdout END ====
[2025-10-23 14:39:20] 2025-10-23 12:39:18,897 [wrapper] ==== wrapper stderr END ====
[2025-10-23 14:39:20]  *** Error codes and diagnostics ***
[2025-10-23 14:39:20]     "exeErrorCode": 0,
[2025-10-23 14:39:20]     "exeErrorDiag": "",
[2025-10-23 14:39:20]     "pilotErrorCode": 0,
[2025-10-23 14:39:20]     "pilotErrorDiag": "",
[2025-10-23 14:39:20]  *** Listing of results directory ***
[2025-10-23 14:39:20] total 439656
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc    557409 Oct 22 15:50 pilot3.tar.gz
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc      5112 Oct 22 16:15 queuedata.json
[2025-10-23 14:39:20] -rwx------. 1 boinc boinc     36292 Oct 22 16:16 runpilot2-wrapper.sh
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc       100 Oct 23 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 14:39:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct 23 09:50 run_atlas
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc       105 Oct 23 09:50 job.xml
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc 230588744 Oct 23 09:50 EVNT.46771634._003604.pool.root.1
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc      6392 Oct 23 09:50 init_data.xml
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc     15120 Oct 23 09:50 start_atlas.sh
[2025-10-23 14:39:20] drwxrwx--x. 2 boinc boinc        68 Oct 23 09:50 shared
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc    569674 Oct 23 09:50 input.tar.gz
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc         0 Oct 23 09:50 boinc_lockfile
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc      2560 Oct 23 09:50 pandaJob.out
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc    978111 Oct 23 09:54 agis_schedconf.cvmfs.json
[2025-10-23 14:39:20] drwx------. 5 boinc boinc      4096 Oct 23 09:54 pilot3
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc 210168739 Oct 23 14:35 HITS.46771637._088253.pool.root.1
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc       531 Oct 23 14:35 boinc_task_state.xml
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc      1017 Oct 23 14:36 memory_monitor_summary.json
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc   1560740 Oct 23 14:36 agis_ddmendpoints.agis.ALL.json
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc    488649 Oct 23 14:36 log.46771637._088253.job.log.tgz.1
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc        95 Oct 23 14:38 pilot_heartbeat.json
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc      7778 Oct 23 14:38 heartbeat.json
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc      4884 Oct 23 14:39 pilotlog.txt
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc      8192 Oct 23 14:39 boinc_mmap_file
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc        28 Oct 23 14:39 wrapper_checkpoint.txt
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc   2290490 Oct 23 14:39 log.46771637._088253.job.log.1
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc       357 Oct 23 14:39 output.list
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc       620 Oct 23 14:39 runtime_log
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc   2795520 Oct 23 14:39 result.tar.gz
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc      8717 Oct 23 14:39 runtime_log.err
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc       657 Oct 23 14:39 GbAMDmbooV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCv5NDmwVdAun.diag
[2025-10-23 14:39:20] -rw-r--r--. 1 boinc boinc     20634 Oct 23 14:39 stderr.txt
[2025-10-23 14:39:20] HITS file was successfully produced:
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc 210168739 Oct 23 14:35 shared/HITS.pool.root.1
[2025-10-23 14:39:20]  *** Contents of shared directory: ***
[2025-10-23 14:39:20] total 433740
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc 230588744 Oct 23 09:50 ATLAS.root_0
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc     15120 Oct 23 09:50 start_atlas.sh
[2025-10-23 14:39:20] -rw-r--r--. 2 boinc boinc    569674 Oct 23 09:50 input.tar.gz
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc 210168739 Oct 23 14:35 HITS.pool.root.1
[2025-10-23 14:39:20] -rw-------. 1 boinc boinc   2795520 Oct 23 14:39 result.tar.gz
14:39:22 (32705): run_atlas exited; CPU time 62357.183878
14:39:22 (32705): called boinc_finish(0)

</stderr_txt>
]]>

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