Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
01:52:41 (6317): wrapper (7.7.26015): starting
01:52:41 (6317): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 01:52:41] Arguments: --nthreads 8
[2025-10-23 01:52:41] Threads: 8
[2025-10-23 01:52:41] Checking for CVMFS
[2025-10-23 01:52:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 01:52:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 01:52:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 01:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 01:52:42] 2.11.0.0 7377 15946 51704 152014 1 188 2868410 4096001 917 130560 0 48185 86.257 1123801 607 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-23 01:52:42] CVMFS is ok
[2025-10-23 01:52:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-23 01:52:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-23 01:52:42] Further information can be found at the LHC@home message board.
[2025-10-23 01:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 01:52:42] Checking for apptainer binary...
[2025-10-23 01:52:42] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-23 01:52:42] apptainer is not installed, using version from CVMFS
[2025-10-23 01:52:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 01:52:42] WARNING: Environment variable TMPDIR already has value [/tmp/job_10709027/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node424
[2025-10-23 01:52:42] apptainer works
[2025-10-23 01:52:42] Set ATHENA_PROC_NUMBER=8
[2025-10-23 01:52:42] Set ATHENA_CORE_NUMBER=8
[2025-10-23 01:52:42] Starting ATLAS job with PandaID=6853626311
[2025-10-23 01:52:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10709027/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 02:45:10]  *** The last 200 lines of the pilot log: ***
[2025-10-23 02:45:10]  mtime=0
[2025-10-23 02:45:10]  protocol_id=None
[2025-10-23 02:45:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-23 02:45:10]  replicas=None
[2025-10-23 02:45:10]  scope=mc23_13p6TeV
[2025-10-23 02:45:10]  status=None
[2025-10-23 02:45:10]  status_code=0
[2025-10-23 02:45:10]  storage_token=
[2025-10-23 02:45:10]  surl=/tmp/job_10709027/atlas/pilot/slots/0/PanDA_Pilot-6853626311/log.46771637._088732.job.log.tgz.1
[2025-10-23 02:45:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/29/log.46771637._088732.job.log.tgz.1
[2025-10-23 02:45:10]  workdir=None
[2025-10-23 02:45:10] ]
[2025-10-23 02:45:10] 2025-10-23 00:44:35,517 | INFO     | transferring file log.46771637._088732.job.log.tgz.1 from /tmp/job_10709027/atlas/pilot/slots/0/PanDA_Pilot-6853626311/log.46771637._088732.job.log.tgz.1 to /tmp/j
[2025-10-23 02:45:10] 2025-10-23 00:44:35,517 | INFO     | executing command: /usr/bin/env mv /tmp/job_10709027/atlas/pilot/slots/0/PanDA_Pilot-6853626311/log.46771637._088732.job.log.tgz.1 /tmp/job_10709027/atlas/pilot/sl
[2025-10-23 02:45:10] 2025-10-23 00:44:35,525 | INFO     | adding to output.list: log.46771637._088732.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/29/log.46771637._088732.job.log.tg
[2025-10-23 02:45:10] 2025-10-23 00:44:35,526 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-23 02:45:10] 2025-10-23 00:44:35,526 | INFO     | summary of transferred files:
[2025-10-23 02:45:10] 2025-10-23 00:44:35,526 | INFO     |  -- lfn=log.46771637._088732.job.log.tgz.1, status_code=0, status=transferred
[2025-10-23 02:45:10] 2025-10-23 00:44:35,526 | INFO     | stage-out finished correctly
[2025-10-23 02:45:10] 2025-10-23 00:44:35,577 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | job 6853626311 has state=finished
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | preparing for final server update for job 6853626311 in state='finished'
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | this job has now completed (state=finished)
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | log transfer has been attempted: DONE
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | job 6853626311 has finished - writing final server update
[2025-10-23 02:45:10] 2025-10-23 00:44:36,611 | INFO     | total number of processed events: 400 (read)
[2025-10-23 02:45:10] 2025-10-23 00:44:36,612 | INFO     | executing command: lscpu
[2025-10-23 02:45:10] 2025-10-23 00:44:36,643 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-23 02:45:10] 2025-10-23 00:44:36,995 | INFO     | time since job start (3109s) is within the limit (172800.0s)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,494 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 02:45:10] 2025-10-23 00:44:38,499 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2864.685140625
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | INFO     | using path: /tmp/job_10709027/atlas/pilot/slots/0/PanDA_Pilot-6853626311/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | INFO     | extracted standard info from prmon json
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 02:45:10] 2025-10-23 00:44:38,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | fitting pss+swap vs Time
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | sum of square deviations: 26400495.0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | sum of deviations: -509011633.0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | mean x: 1761178801.5
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | mean y: 2538918.3181818184
[2025-10-23 02:45:10] 2025-10-23 00:44:38,505 | INFO     | -- intersect: 33958739275.792454
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | intersect: 33958739275.792454
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | chi2: 0.003086153640112784
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | -- intersect: 33958739275.792454
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | current memory leak: -19.28 B/s (using 44 data points, chi2=0.00)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | could have reported an average CPU frequency of 2656 MHz (5 samples)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | ..............................
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . Timing measurements:
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . get job = 0 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . initial setup = 1 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . payload setup = 2 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . stage-in = 0 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . payload execution = 3089 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . stage-out = 0 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | . log creation = 0 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,506 | INFO     | ..............................
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | 
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | job summary report
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | --------------------------------------------------
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | PanDA job id: 6853626311
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | task id: 46771637
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | errors: (none)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | pilot state: finished 
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | transexitcode: 0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | exeerrorcode: 0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,555 | INFO     | exeerrordiag: 
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | exitcode: 0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | exitmsg: OK
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | cpuconsumptiontime: 22330 s
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | nevents: 400
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | neventsw: 0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | pid: 19504
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | pgrp: 19504
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | corecount: 8
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | event service: False
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | sizes: {0: 2349057, 2: 2349319, 11: 2349347, 3094: 2374900, 3095: 2383984, 3098: 2384154}
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | --------------------------------------------------
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | 
[2025-10-23 02:45:10] 2025-10-23 00:44:38,556 | INFO     | executing command: ls -lF /tmp/job_10709027/atlas/pilot/slots/0
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | job 6853626311 has completed (purged errors)
[2025-10-23 02:45:10] 2025-10-23 00:44:38,565 | INFO     | overall cleanup function is called
[2025-10-23 02:45:10] 2025-10-23 00:44:39,571 | INFO     | --- collectZombieJob: --- 10, [19504]
[2025-10-23 02:45:10] 2025-10-23 00:44:39,571 | INFO     | zombie collector waiting for pid 19504
[2025-10-23 02:45:10] 2025-10-23 00:44:39,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 02:45:10] 2025-10-23 00:44:39,571 | INFO     | collected zombie processes
[2025-10-23 02:45:10] 2025-10-23 00:44:39,571 | INFO     | will attempt to kill all subprocesses of pid=19504
[2025-10-23 02:45:10] 2025-10-23 00:44:39,677 | INFO     | process IDs to be killed: [19504] (in reverse order)
[2025-10-23 02:45:10] 2025-10-23 00:44:39,715 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 02:45:10] 2025-10-23 00:44:39,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 02:45:10] 2025-10-23 00:44:39,718 | INFO     | did not find any defunct processes belonging to 19504
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | did not find any defunct processes belonging to 19504
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | ready for new job
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | ***************************************
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | ***************************************
[2025-10-23 02:45:10] 2025-10-23 00:44:39,722 | INFO     | 
[2025-10-23 02:45:10] 2025-10-23 00:44:39,736 | INFO     | architecture information:
[2025-10-23 02:45:10] 2025-10-23 00:44:39,736 | INFO     | executing command: cat /etc/os-release
[2025-10-23 02:45:10] 2025-10-23 00:44:39,741 | INFO     | cat /etc/os-release:
[2025-10-23 02:45:10] NAME="CentOS Linux"
[2025-10-23 02:45:10] VERSION="7 (Core)"
[2025-10-23 02:45:10] ID="centos"
[2025-10-23 02:45:10] ID_LIKE="rhel fedora"
[2025-10-23 02:45:10] VERSION_ID="7"
[2025-10-23 02:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 02:45:10] ANSI_COLOR="0;31"
[2025-10-23 02:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 02:45:10] HOME_URL="https://www.centos.org/"
[2025-10-23 02:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 02:45:10] 
[2025-10-23 02:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 02:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 02:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 02:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 02:45:10] 
[2025-10-23 02:45:10] 2025-10-23 00:44:39,741 | INFO     | ***************************************
[2025-10-23 02:45:10] 2025-10-23 00:44:39,991 | WARNING  | process 19504 can no longer be monitored (due to stat problems) - aborting
[2025-10-23 02:45:10] 2025-10-23 00:44:40,070 | INFO     | using path: /tmp/job_10709027/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 02:45:10] 2025-10-23 00:44:40,168 | INFO     | number of running child processes to parent process 19504: 1
[2025-10-23 02:45:10] 2025-10-23 00:44:40,168 | INFO     | maximum number of monitored processes: 6
[2025-10-23 02:45:10] 2025-10-23 00:44:40,168 | INFO     | aborting job monitoring since job object (job id=6853626311) has expired
[2025-10-23 02:45:10] 2025-10-23 00:44:40,244 | INFO     | executing command: df -mP /tmp/job_10709027/atlas/pilot/slots/0
[2025-10-23 02:45:10] 2025-10-23 00:44:40,251 | INFO     | sufficient remaining disk space (225389314048 B)
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | INFO     | update_server=False
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 02:45:10] 2025-10-23 00:44:40,252 | INFO     | will abort loop
[2025-10-23 02:45:10] 2025-10-23 00:44:40,416 | INFO     | all job control threads have been joined
[2025-10-23 02:45:10] 2025-10-23 00:44:40,543 | INFO     | all data control threads have been joined
[2025-10-23 02:45:10] 2025-10-23 00:44:41,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 02:45:10] 2025-10-23 00:44:41,257 | INFO     | [job] retrieve thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,257 | INFO     | [job] queue monitor thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,257 | INFO     | [job] job monitor thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,421 | INFO     | [job] control thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,493 | INFO     | all payload control threads have been joined
[2025-10-23 02:45:10] 2025-10-23 00:44:41,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,548 | INFO     | [data] control thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:41,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 02:45:10] 2025-10-23 00:44:41,960 | INFO     | [payload] validate_post thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,147 | INFO     | [job] validate thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,168 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,282 | INFO     | [payload] failed_post thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,382 | INFO     | [data] copytool_in thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,447 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:42,498 | INFO     | [payload] control thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:43,090 | INFO     | [data] copytool_out thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:45,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:50,825 | INFO     | job.realtimelogging is not enabled
[2025-10-23 02:45:10] 2025-10-23 00:44:51,594 | INFO     | [monitor] cgroup control has ended
[2025-10-23 02:45:10] 2025-10-23 00:44:51,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 02:45:10] 2025-10-23 00:44:53,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062568192)>']
[2025-10-23 02:45:10] 2025-10-23 00:44:58,676 | INFO     | all workflow threads have been joined
[2025-10-23 02:45:10] 2025-10-23 00:44:58,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 02:45:10] 2025-10-23 00:44:58,676 | INFO     | traces error code: 0
[2025-10-23 02:45:10] 2025-10-23 00:44:58,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | INFO     | PID=11195 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | INFO     | .. there are 5 such processes running
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 02:45:10] 2025-10-23 00:45:10,181 | INFO     | [monitor] control thread has ended
[2025-10-23 02:45:10] 2025-10-23 00:45:10,235 [wrapper] ==== pilot stdout END ====
[2025-10-23 02:45:10] 2025-10-23 00:45:10,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 02:45:10] 2025-10-23 00:45:10,238 [wrapper] pilotpid: 11195
[2025-10-23 02:45:10] 2025-10-23 00:45:10,239 [wrapper] Pilot exit status: 0
[2025-10-23 02:45:10] 2025-10-23 00:45:10,243 [wrapper] pandaids: 6853626311
[2025-10-23 02:45:10] 2025-10-23 00:45:10,267 [wrapper] cleanup supervisor_pilot 21671 11196
[2025-10-23 02:45:10] 2025-10-23 00:45:10,269 [wrapper] Test setup, not cleaning
[2025-10-23 02:45:10] 2025-10-23 00:45:10,270 [wrapper] apfmon messages muted
[2025-10-23 02:45:10] 2025-10-23 00:45:10,270 [wrapper] ==== wrapper stdout END ====
[2025-10-23 02:45:10] 2025-10-23 00:45:10,271 [wrapper] ==== wrapper stderr END ====
[2025-10-23 02:45:10]  *** Error codes and diagnostics ***
[2025-10-23 02:45:10]     "exeErrorCode": 0,
[2025-10-23 02:45:10]     "exeErrorDiag": "",
[2025-10-23 02:45:10]     "pilotErrorCode": 0,
[2025-10-23 02:45:10]     "pilotErrorDiag": "",
[2025-10-23 02:45:10]  *** Listing of results directory ***
[2025-10-23 02:45:10] total 423196
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    557409 Oct 22 15:50 pilot3.tar.gz
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      5112 Oct 22 16:35 queuedata.json
[2025-10-23 02:45:10] -rwx------ 1 mf493845 unix-user     36292 Oct 22 16:37 runpilot2-wrapper.sh
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       100 Oct 23 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 02:45:10] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 23 00:55 run_atlas
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       105 Oct 23 00:55 job.xml
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user 225541657 Oct 23 01:52 EVNT.46771634._003623.pool.root.1
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 23 01:52 start_atlas.sh
[2025-10-23 02:45:10] drwxrwx--x 2 mf493845 unix-user       100 Oct 23 01:52 shared
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user    569679 Oct 23 01:52 input.tar.gz
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      6394 Oct 23 01:52 init_data.xml
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user         0 Oct 23 01:52 boinc_setup_complete
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      8192 Oct 23 01:52 boinc_mmap_file
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user         0 Oct 23 01:52 boinc_lockfile
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      2560 Oct 23 01:52 pandaJob.out
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    978084 Oct 23 01:52 agis_schedconf.cvmfs.json
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user   1560740 Oct 23 01:52 agis_ddmendpoints.agis.ALL.json
[2025-10-23 02:45:10] drwx------ 5 mf493845 unix-user       440 Oct 23 01:52 pilot3
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user 202355176 Oct 23 02:44 HITS.46771637._088732.pool.root.1
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user        95 Oct 23 02:44 pilot_heartbeat.json
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      1014 Oct 23 02:44 memory_monitor_summary.json
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    299908 Oct 23 02:44 log.46771637._088732.job.log.tgz.1
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      7769 Oct 23 02:44 heartbeat.json
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       820 Oct 23 02:45 pilotlog.txt
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    489497 Oct 23 02:45 log.46771637._088732.job.log.1
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       357 Oct 23 02:45 output.list
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       620 Oct 23 02:45 runtime_log
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    808960 Oct 23 02:45 result.tar.gz
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user      9076 Oct 23 02:45 runtime_log.err
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user       641 Oct 23 02:45 IMUKDm38oV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKlhMDm3T54En.diag
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user     22124 Oct 23 02:45 stderr.txt
[2025-10-23 02:45:10] HITS file was successfully produced:
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user 202355176 Oct 23 02:44 shared/HITS.pool.root.1
[2025-10-23 02:45:10]  *** Contents of shared directory: ***
[2025-10-23 02:45:10] total 419240
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user 225541657 Oct 23 01:52 ATLAS.root_0
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 23 01:52 start_atlas.sh
[2025-10-23 02:45:10] -rw-r--r-- 2 mf493845 unix-user    569679 Oct 23 01:52 input.tar.gz
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user 202355176 Oct 23 02:44 HITS.pool.root.1
[2025-10-23 02:45:10] -rw------- 1 mf493845 unix-user    808960 Oct 23 02:45 result.tar.gz
02:45:12 (6317): run_atlas exited; CPU time 22373.963145
02:45:12 (6317): called boinc_finish(0)

</stderr_txt>
]]>

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