Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:34:47 (3773639): wrapper (7.7.26015): starting
15:34:47 (3773639): wrapper: running run_atlas (--nthreads 9)
[2025-10-22 15:34:47] Arguments: --nthreads 9
[2025-10-22 15:34:47] Threads: 9
[2025-10-22 15:34:47] Checking for CVMFS
[2025-10-22 15:34:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 15:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 15:34:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 15:34:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 15:34:48] 2.13.2.0 87759 2847 74904 152007 3 57 26799190 32935936 8244 16776704 0 11819998 99.998 102387 11147 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 15:34:48] CVMFS is ok
[2025-10-22 15:34:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 15:34:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 15:34:48] Further information can be found at the LHC@home message board.
[2025-10-22 15:34:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 15:34:48] Checking for apptainer binary...
[2025-10-22 15:34:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 15:34:48] Running /usr/bin/apptainer --version
[2025-10-22 15:34:48] apptainer version 1.4.3-1.el9
[2025-10-22 15:34:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 15:34:48] c6-12-25-4.aglt2.org
[2025-10-22 15:34:48] apptainer works
[2025-10-22 15:34:48] Set ATHENA_PROC_NUMBER=9
[2025-10-22 15:34:48] Set ATHENA_CORE_NUMBER=9
[2025-10-22 15:34:48] Starting ATLAS job with PandaID=6853467544
[2025-10-22 15:34:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 19:15:36]  *** The last 200 lines of the pilot log: ***
[2025-10-22 19:15:36] 2025-10-22 23:14:51,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 19:15:36] 2025-10-22 23:14:51,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 19:15:36] 2025-10-22 23:14:51,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 19:15:36] 2025-10-22 23:14:51,032 | INFO     | fitting pss+swap vs Time
[2025-10-22 19:15:36] 2025-10-22 23:14:51,033 | INFO     | sum of square deviations: 3124858590.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,037 | INFO     | sum of deviations: 15088582105.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,037 | INFO     | mean x: 1761168309.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,037 | INFO     | mean y: 2165879.138888889
[2025-10-22 19:15:36] 2025-10-22 23:14:51,038 | INFO     | -- intersect: -8501749377.587913
[2025-10-22 19:15:36] 2025-10-22 23:14:51,038 | INFO     | intersect: -8501749377.587913
[2025-10-22 19:15:36] 2025-10-22 23:14:51,039 | INFO     | chi2: 3.8929972061848033
[2025-10-22 19:15:36] 2025-10-22 23:14:51,040 | INFO     | sum of square deviations: 2912836010.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,043 | INFO     | sum of deviations: 41415067513.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,044 | INFO     | mean x: 1761168157.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,044 | INFO     | mean y: 2184561.3696682462
[2025-10-22 19:15:36] 2025-10-22 23:14:51,044 | INFO     | -- intersect: -25038325056.575073
[2025-10-22 19:15:36] 2025-10-22 23:14:51,044 | INFO     | intersect: -25038325056.575073
[2025-10-22 19:15:36] 2025-10-22 23:14:51,045 | INFO     | chi2: 2.2449408835878555
[2025-10-22 19:15:36] 2025-10-22 23:14:51,045 | INFO     | current chi2=2.2449408835878555 (change=42.33386861872599 %)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,046 | INFO     | sum of square deviations: 2710627567.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,050 | INFO     | sum of deviations: 40707580454.49999
[2025-10-22 19:15:36] 2025-10-22 23:14:51,050 | INFO     | mean x: 1761168004.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,050 | INFO     | mean y: 2184020.5776699027
[2025-10-22 19:15:36] 2025-10-22 23:14:51,050 | INFO     | -- intersect: -26446631411.192245
[2025-10-22 19:15:36] 2025-10-22 23:14:51,051 | INFO     | intersect: -26446631411.192245
[2025-10-22 19:15:36] 2025-10-22 23:14:51,052 | INFO     | chi2: 2.2440064511202746
[2025-10-22 19:15:36] 2025-10-22 23:14:51,052 | INFO     | current chi2=2.2440064511202746 (change=0.041623923124756934 %)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,052 | INFO     | right removable region: 205
[2025-10-22 19:15:36] 2025-10-22 23:14:51,053 | INFO     | sum of square deviations: 2912836010.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,056 | INFO     | sum of deviations: -21618581535.999992
[2025-10-22 19:15:36] 2025-10-22 23:14:51,057 | INFO     | mean x: 1761168462.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,057 | INFO     | mean y: 2192117.9668246447
[2025-10-22 19:15:36] 2025-10-22 23:14:51,057 | INFO     | -- intersect: 13073289791.73484
[2025-10-22 19:15:36] 2025-10-22 23:14:51,058 | INFO     | intersect: 13073289791.73484
[2025-10-22 19:15:36] 2025-10-22 23:14:51,058 | INFO     | chi2: 2.1557658319181527
[2025-10-22 19:15:36] 2025-10-22 23:14:51,059 | INFO     | current chi2=2.1557658319181527 (change=44.624521474269535 %)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,060 | INFO     | sum of square deviations: 2710627567.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,063 | INFO     | sum of deviations: -37229856079.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,063 | INFO     | mean x: 1761168614.5
[2025-10-22 19:15:36] 2025-10-22 23:14:51,064 | INFO     | mean y: 2203852.694174757
[2025-10-22 19:15:36] 2025-10-22 23:14:51,064 | INFO     | -- intersect: 24191456126.122704
[2025-10-22 19:15:36] 2025-10-22 23:14:51,064 | INFO     | intersect: 24191456126.122704
[2025-10-22 19:15:36] 2025-10-22 23:14:51,065 | INFO     | chi2: 1.8647900869851737
[2025-10-22 19:15:36] 2025-10-22 23:14:51,065 | INFO     | current chi2=1.8647900869851737 (change=13.497558066131669 %)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,065 | INFO     | left removable region: 20
[2025-10-22 19:15:36] 2025-10-22 23:14:51,066 | INFO     | sum of square deviations: 1963274020.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,069 | INFO     | sum of deviations: -10602751112.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,069 | INFO     | mean x: 1761168584.0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,070 | INFO     | mean y: 2225711.054054054
[2025-10-22 19:15:36] 2025-10-22 23:14:51,070 | INFO     | -- intersect: 9513497175.047382
[2025-10-22 19:15:36] 2025-10-22 23:14:51,070 | INFO     | intersect: 9513497175.047382
[2025-10-22 19:15:36] 2025-10-22 23:14:51,071 | INFO     | chi2: 0.12163114174495583
[2025-10-22 19:15:36] 2025-10-22 23:14:51,071 | INFO     | -- intersect: 9513497175.047382
[2025-10-22 19:15:36] 2025-10-22 23:14:51,072 | INFO     | current memory leak: -5.40 B/s (using 185 data points, chi2=0.12)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,072 | INFO     | could have reported an average CPU frequency of 1360 MHz (11 samples)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,073 | INFO     | ..............................
[2025-10-22 19:15:36] 2025-10-22 23:14:51,073 | INFO     | . Timing measurements:
[2025-10-22 19:15:36] 2025-10-22 23:14:51,073 | INFO     | . get job = 0 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,073 | INFO     | . initial setup = 3 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,074 | INFO     | . payload setup = 12 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,074 | INFO     | . stage-in = 0 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,074 | INFO     | . payload execution = 13128 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,074 | INFO     | . stage-out = 3 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,074 | INFO     | . log creation = 0 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,075 | INFO     | ..............................
[2025-10-22 19:15:36] 2025-10-22 23:14:51,316 | INFO     | 
[2025-10-22 19:15:36] 2025-10-22 23:14:51,316 | INFO     | job summary report
[2025-10-22 19:15:36] 2025-10-22 23:14:51,317 | INFO     | --------------------------------------------------
[2025-10-22 19:15:36] 2025-10-22 23:14:51,317 | INFO     | PanDA job id: 6853467544
[2025-10-22 19:15:36] 2025-10-22 23:14:51,317 | INFO     | task id: 46771637
[2025-10-22 19:15:36] 2025-10-22 23:14:51,317 | INFO     | errors: (none)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 19:15:36] 2025-10-22 23:14:51,318 | INFO     | pilot state: finished 
[2025-10-22 19:15:36] 2025-10-22 23:14:51,318 | INFO     | transexitcode: 0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,318 | INFO     | exeerrorcode: 0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,318 | INFO     | exeerrordiag: 
[2025-10-22 19:15:36] 2025-10-22 23:14:51,319 | INFO     | exitcode: 0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,319 | INFO     | exitmsg: OK
[2025-10-22 19:15:36] 2025-10-22 23:14:51,319 | INFO     | cpuconsumptiontime: 108447 s
[2025-10-22 19:15:36] 2025-10-22 23:14:51,319 | INFO     | nevents: 400
[2025-10-22 19:15:36] 2025-10-22 23:14:51,319 | INFO     | neventsw: 0
[2025-10-22 19:15:36] 2025-10-22 23:14:51,320 | INFO     | pid: 3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:51,320 | INFO     | pgrp: 3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:51,320 | INFO     | corecount: 9
[2025-10-22 19:15:36] 2025-10-22 23:14:51,320 | INFO     | event service: False
[2025-10-22 19:15:36] 2025-10-22 23:14:51,320 | INFO     | sizes: {0: 2348703, 1: 2348787, 2: 2348986, 11: 2349248, 13: 2349276, 13145: 2380086, 13149: 2389084, 13152: 2389140, 13160: 2389334}
[2025-10-22 19:15:36] 2025-10-22 23:14:51,321 | INFO     | --------------------------------------------------
[2025-10-22 19:15:36] 2025-10-22 23:14:51,321 | INFO     | 
[2025-10-22 19:15:36] 2025-10-22 23:14:51,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-22 19:15:36] 2025-10-22 23:14:51,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,357 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 19:15:36] 2025-10-22 23:14:51,361 | INFO     | job 6853467544 has completed (purged errors)
[2025-10-22 19:15:36] 2025-10-22 23:14:51,361 | INFO     | overall cleanup function is called
[2025-10-22 19:15:36] 2025-10-22 23:14:52,372 | INFO     | --- collectZombieJob: --- 10, [3784348]
[2025-10-22 19:15:36] 2025-10-22 23:14:52,373 | INFO     | zombie collector waiting for pid 3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:52,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 19:15:36] 2025-10-22 23:14:52,373 | INFO     | collected zombie processes
[2025-10-22 19:15:36] 2025-10-22 23:14:52,373 | INFO     | will attempt to kill all subprocesses of pid=3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:53,276 | INFO     | process IDs to be killed: [3784348] (in reverse order)
[2025-10-22 19:15:36] 2025-10-22 23:14:53,502 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 19:15:36] 2025-10-22 23:14:53,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 19:15:36] 2025-10-22 23:14:53,530 | INFO     | did not find any defunct processes belonging to 3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:53,556 | INFO     | did not find any defunct processes belonging to 3784348
[2025-10-22 19:15:36] 2025-10-22 23:14:53,557 | INFO     | ready for new job
[2025-10-22 19:15:36] 2025-10-22 23:14:53,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 19:15:36] 2025-10-22 23:14:53,561 | INFO     | ***************************************
[2025-10-22 19:15:36] 2025-10-22 23:14:53,561 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 19:15:36] 2025-10-22 23:14:53,561 | INFO     | ***************************************
[2025-10-22 19:15:36] 2025-10-22 23:14:53,562 | INFO     | 
[2025-10-22 19:15:36] 2025-10-22 23:14:53,587 | INFO     | architecture information:
[2025-10-22 19:15:36] 2025-10-22 23:14:53,588 | INFO     | executing command: cat /etc/os-release
[2025-10-22 19:15:36] 2025-10-22 23:14:53,615 | INFO     | cat /etc/os-release:
[2025-10-22 19:15:36] NAME="CentOS Linux"
[2025-10-22 19:15:36] VERSION="7 (Core)"
[2025-10-22 19:15:36] ID="centos"
[2025-10-22 19:15:36] ID_LIKE="rhel fedora"
[2025-10-22 19:15:36] VERSION_ID="7"
[2025-10-22 19:15:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 19:15:36] ANSI_COLOR="0;31"
[2025-10-22 19:15:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 19:15:36] HOME_URL="https://www.centos.org/"
[2025-10-22 19:15:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 19:15:36] 
[2025-10-22 19:15:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 19:15:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 19:15:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 19:15:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 19:15:36] 
[2025-10-22 19:15:36] 2025-10-22 23:14:53,616 | INFO     | ***************************************
[2025-10-22 19:15:36] 2025-10-22 23:14:54,119 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-22 19:15:36] 2025-10-22 23:14:54,151 | INFO     | sufficient remaining disk space (91096088576 B)
[2025-10-22 19:15:36] 2025-10-22 23:14:54,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 19:15:36] 2025-10-22 23:14:54,152 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 19:15:36] 2025-10-22 23:14:54,153 | INFO     | update_server=False
[2025-10-22 19:15:36] 2025-10-22 23:14:54,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 19:15:36] 2025-10-22 23:14:54,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 19:15:36] 2025-10-22 23:14:54,154 | INFO     | aborting loop
[2025-10-22 19:15:36] 2025-10-22 23:14:54,290 | INFO     | all payload control threads have been joined
[2025-10-22 19:15:36] 2025-10-22 23:14:54,482 | INFO     | all job control threads have been joined
[2025-10-22 19:15:36] 2025-10-22 23:14:54,501 | INFO     | all data control threads have been joined
[2025-10-22 19:15:36] 2025-10-22 23:14:55,158 | INFO     | [job] retrieve thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 19:15:36] 2025-10-22 23:14:55,159 | INFO     | [job] job monitor thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,186 | INFO     | [data] copytool_in thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,293 | INFO     | [payload] control thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,400 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,484 | INFO     | [job] control thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,507 | INFO     | [data] control thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:55,995 | INFO     | [payload] validate_post thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:56,189 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:56,195 | INFO     | [job] validate thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:56,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 19:15:36] 2025-10-22 23:14:56,345 | INFO     | [payload] failed_post thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:57,165 | INFO     | [data] copytool_out thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:57,329 | INFO     | [job] queue monitor thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:14:57,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 19:15:36] 2025-10-22 23:15:01,442 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 19:15:36] 2025-10-22 23:15:23,845 | INFO     | PID=3777827 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-22 19:15:36] 2025-10-22 23:15:23,845 | INFO     | .. there are 10 such processes running
[2025-10-22 19:15:36] 2025-10-22 23:15:23,846 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 19:15:36] 2025-10-22 23:15:23,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 19:15:36] 2025-10-22 23:15:23,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 19:15:36] 2025-10-22 23:15:30,120 | INFO     | [monitor] cgroup control has ended
[2025-10-22 19:15:36] 2025-10-22 23:15:30,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228518356800)>', '<ExcThread(monitor, started 140228148827904)>']
[2025-10-22 19:15:36] 2025-10-22 23:15:30,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 19:15:36] 2025-10-22 23:15:30,882 | INFO     | [monitor] control thread has ended
[2025-10-22 19:15:36] 2025-10-22 23:15:35,846 | INFO     | all workflow threads have been joined
[2025-10-22 19:15:36] 2025-10-22 23:15:35,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 19:15:36] 2025-10-22 23:15:35,848 | INFO     | traces error code: 0
[2025-10-22 19:15:36] 2025-10-22 23:15:35,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 19:15:36] 2025-10-22 23:15:36,081 [wrapper] ==== pilot stdout END ====
[2025-10-22 19:15:36] 2025-10-22 23:15:36,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 19:15:36] 2025-10-22 23:15:36,092 [wrapper] pilotpid: 3777827
[2025-10-22 19:15:36] 2025-10-22 23:15:36,098 [wrapper] Pilot exit status: 0
[2025-10-22 19:15:36] 2025-10-22 23:15:36,119 [wrapper] pandaids: 6853467544
[2025-10-22 19:15:36] 2025-10-22 23:15:36,280 [wrapper] cleanup supervisor_pilot  159590 3777828
[2025-10-22 19:15:36] 2025-10-22 23:15:36,286 [wrapper] Test setup, not cleaning
[2025-10-22 19:15:36] 2025-10-22 23:15:36,291 [wrapper] apfmon messages muted
[2025-10-22 19:15:36] 2025-10-22 23:15:36,296 [wrapper] ==== wrapper stdout END ====
[2025-10-22 19:15:36] 2025-10-22 23:15:36,301 [wrapper] ==== wrapper stderr END ====
[2025-10-22 19:15:36]  *** Error codes and diagnostics ***
[2025-10-22 19:15:36]     "exeErrorCode": 0,
[2025-10-22 19:15:36]     "exeErrorDiag": "",
[2025-10-22 19:15:36]     "pilotErrorCode": 0,
[2025-10-22 19:15:36]     "pilotErrorDiag": "",
[2025-10-22 19:15:36]  *** Listing of results directory ***
[2025-10-22 19:15:36] total 436636
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 06:11 pilot3.tar.gz
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 07:11 queuedata.json
[2025-10-22 19:15:36] -rwx------. 1 boincer umatlas     36292 Oct 22 07:15 runpilot2-wrapper.sh
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas       100 Oct 22 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 19:15:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 22 15:34 run_atlas
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas       105 Oct 22 15:34 job.xml
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas 228523196 Oct 22 15:34 EVNT.46771634._003474.pool.root.1
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 15:34 start_atlas.sh
[2025-10-22 19:15:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 22 15:34 shared
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas    569676 Oct 22 15:34 input.tar.gz
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas         0 Oct 22 15:34 boinc_lockfile
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas      2559 Oct 22 15:34 pandaJob.out
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas    978039 Oct 22 15:35 agis_schedconf.cvmfs.json
[2025-10-22 19:15:36] drwx------. 5 boincer umatlas      4096 Oct 22 15:35 pilot3
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas      6860 Oct 22 19:10 init_data.xml
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas 210133750 Oct 22 19:13 HITS.46771637._086101.pool.root.1
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas       531 Oct 22 19:13 boinc_task_state.xml
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas      1035 Oct 22 19:14 memory_monitor_summary.json
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas   1560740 Oct 22 19:14 agis_ddmendpoints.agis.ALL.json
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas    481410 Oct 22 19:14 log.46771637._086101.job.log.tgz.1
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas      7829 Oct 22 19:14 heartbeat.json
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas        95 Oct 22 19:15 pilot_heartbeat.json
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas        29 Oct 22 19:15 wrapper_checkpoint.txt
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 22 19:15 boinc_mmap_file
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas      4825 Oct 22 19:15 pilotlog.txt
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas   1795292 Oct 22 19:15 log.46771637._086101.job.log.1
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas       357 Oct 22 19:15 output.list
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas       620 Oct 22 19:15 runtime_log
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas   2293760 Oct 22 19:15 result.tar.gz
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas       658 Oct 22 19:15 tNQKDmJzlV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyY5NDmQAugvm.diag
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas      8714 Oct 22 19:15 runtime_log.err
[2025-10-22 19:15:36] -rw-r--r--. 1 boincer umatlas     20916 Oct 22 19:15 stderr.txt
[2025-10-22 19:15:36] HITS file was successfully produced:
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas 210133750 Oct 22 19:13 shared/HITS.pool.root.1
[2025-10-22 19:15:36]  *** Contents of shared directory: ***
[2025-10-22 19:15:36] total 431204
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas 228523196 Oct 22 15:34 ATLAS.root_0
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 15:34 start_atlas.sh
[2025-10-22 19:15:36] -rw-r--r--. 2 boincer umatlas    569676 Oct 22 15:34 input.tar.gz
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas 210133750 Oct 22 19:13 HITS.pool.root.1
[2025-10-22 19:15:36] -rw-------. 1 boincer umatlas   2293760 Oct 22 19:15 result.tar.gz
19:15:37 (3773639): run_atlas exited; CPU time 109818.690442
19:15:37 (3773639): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN