Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:58:03 (758171): wrapper (7.7.26015): starting
11:58:03 (758171): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 11:58:03] Arguments: --nthreads 8
[2025-10-22 11:58:03] Threads: 8
[2025-10-22 11:58:03] Checking for CVMFS
[2025-10-22 11:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 11:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 11:58:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 11:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 11:58:03] 2.11.3.0 2018 46237 175848 152005 1 1035 32336303 45568000 18671 130560 0 303803106 99.872 114092468 14246 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-22 11:58:03] CVMFS is ok
[2025-10-22 11:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 11:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 11:58:03] Further information can be found at the LHC@home message board.
[2025-10-22 11:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 11:58:03] Checking for apptainer binary...
[2025-10-22 11:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 11:58:03] Running /usr/bin/apptainer --version
[2025-10-22 11:58:03] apptainer version 1.4.1-1.el9
[2025-10-22 11:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 11:58:04] wns0002.triumf.lcg
[2025-10-22 11:58:04] apptainer works
[2025-10-22 11:58:04] Set ATHENA_PROC_NUMBER=8
[2025-10-22 11:58:04] Set ATHENA_CORE_NUMBER=8
[2025-10-22 11:58:04] Starting ATLAS job with PandaID=6855460727
[2025-10-22 11:58:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 12:01:36]  *** The last 200 lines of the pilot log: ***
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | found no stored workdir sizes
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | wrong length of table data, x=[1761159520.0], y=[1052.0] (must be same and length>=4)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . Timing measurements:
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . get job = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . initial setup = 3 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload setup = 5 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-in = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload execution = 18 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-out = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . log creation = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855460727/pilotlog.txt
[2025-10-22 12:01:36] 2025-10-22 19:01:02,317 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-22 12:01:36] - Log from pilotlog.txt -
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | found no stored workdir sizes
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | wrong length of table data, x=[1761159520.0], y=[1052.0] (must be same and length>=4)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . Timing measurements:
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . get job = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . initial setup = 3 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload setup = 5 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-in = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload execution = 18 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-out = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . log creation = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855460727/pilotlog.txt
[2025-10-22 12:01:36] 2025-10-22 19:01:02,318 | WARNING  | 
[2025-10-22 12:01:36] [begin log extracts]
[2025-10-22 12:01:36] - Log from pilotlog.txt -
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 12:01:36] 2025-10-22 19:01:02,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | found no stored workdir sizes
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | WARNING  | wrong length of table data, x=[1761159520.0], y=[1052.0] (must be same and length>=4)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,299 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . Timing measurements:
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . get job = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . initial setup = 3 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload setup = 5 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-in = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . payload execution = 18 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . stage-out = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | . log creation = 0 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | ..............................
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 12:01:36] 2025-10-22 19:01:02,300 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855460727/pilotlog.txt
[2025-10-22 12:01:36] [end log extracts]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,318 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,319 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | 
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | job summary report
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | --------------------------------------------------
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | PanDA job id: 6855460727
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | task id: 46809188
[2025-10-22 12:01:36] 2025-10-22 19:01:02,413 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-22 11:58:49,833 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | pilot state: failed 
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | transexitcode: 65
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | exeerrorcode: 65
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | exitcode: 65
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | cpuconsumptiontime: 18 s
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | nevents: 0
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | neventsw: 0
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | pid: 768384
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | pgrp: 768384
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | corecount: 8
[2025-10-22 12:01:36] 2025-10-22 19:01:02,414 | INFO     | event service: False
[2025-10-22 12:01:36] 2025-10-22 19:01:02,415 | INFO     | sizes: {0: 2348784, 5: 2349046, 11: 2349102, 27: 2372481, 29: 2376773, 32: 2376801, 152: 2377095}
[2025-10-22 12:01:36] 2025-10-22 19:01:02,415 | INFO     | --------------------------------------------------
[2025-10-22 12:01:36] 2025-10-22 19:01:02,415 | INFO     | 
[2025-10-22 12:01:36] 2025-10-22 19:01:02,415 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-22 12:01:36] 2025-10-22 19:01:02,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 12:01:36] 2025-10-22 19:01:02,434 | INFO     | job 6855460727 has completed (purged errors)
[2025-10-22 12:01:36] 2025-10-22 19:01:02,435 | INFO     | overall cleanup function is called
[2025-10-22 12:01:36] 2025-10-22 19:01:03,441 | INFO     | --- collectZombieJob: --- 10, [768384]
[2025-10-22 12:01:36] 2025-10-22 19:01:03,441 | INFO     | zombie collector waiting for pid 768384
[2025-10-22 12:01:36] 2025-10-22 19:01:03,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 12:01:36] 2025-10-22 19:01:03,441 | INFO     | collected zombie processes
[2025-10-22 12:01:36] 2025-10-22 19:01:03,441 | INFO     | will attempt to kill all subprocesses of pid=768384
[2025-10-22 12:01:36] 2025-10-22 19:01:03,648 | INFO     | process IDs to be killed: [768384] (in reverse order)
[2025-10-22 12:01:36] 2025-10-22 19:01:03,716 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 12:01:36] 2025-10-22 19:01:03,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 12:01:36] 2025-10-22 19:01:03,724 | INFO     | did not find any defunct processes belonging to 768384
[2025-10-22 12:01:36] 2025-10-22 19:01:03,731 | INFO     | did not find any defunct processes belonging to 768384
[2025-10-22 12:01:36] 2025-10-22 19:01:03,732 | INFO     | ready for new job
[2025-10-22 12:01:36] 2025-10-22 19:01:03,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 12:01:36] 2025-10-22 19:01:03,734 | INFO     | ***************************************
[2025-10-22 12:01:36] 2025-10-22 19:01:03,734 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 12:01:36] 2025-10-22 19:01:03,734 | INFO     | ***************************************
[2025-10-22 12:01:36] 2025-10-22 19:01:03,734 | INFO     | 
[2025-10-22 12:01:36] 2025-10-22 19:01:03,736 | INFO     | architecture information:
[2025-10-22 12:01:36] 2025-10-22 19:01:03,736 | INFO     | executing command: cat /etc/os-release
[2025-10-22 12:01:36] 2025-10-22 19:01:03,747 | INFO     | cat /etc/os-release:
[2025-10-22 12:01:36] NAME="CentOS Linux"
[2025-10-22 12:01:36] VERSION="7 (Core)"
[2025-10-22 12:01:36] ID="centos"
[2025-10-22 12:01:36] ID_LIKE="rhel fedora"
[2025-10-22 12:01:36] VERSION_ID="7"
[2025-10-22 12:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 12:01:36] ANSI_COLOR="0;31"
[2025-10-22 12:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 12:01:36] HOME_URL="https://www.centos.org/"
[2025-10-22 12:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 12:01:36] 
[2025-10-22 12:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 12:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 12:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 12:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 12:01:36] 
[2025-10-22 12:01:36] 2025-10-22 19:01:03,747 | INFO     | ***************************************
[2025-10-22 12:01:36] 2025-10-22 19:01:04,251 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-22 12:01:36] 2025-10-22 19:01:04,267 | INFO     | sufficient remaining disk space (1241762496512 B)
[2025-10-22 12:01:36] 2025-10-22 19:01:04,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 12:01:36] 2025-10-22 19:01:04,267 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 12:01:36] 2025-10-22 19:01:04,267 | INFO     | update_server=False
[2025-10-22 12:01:36] 2025-10-22 19:01:04,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 12:01:36] 2025-10-22 19:01:04,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 12:01:36] 2025-10-22 19:01:04,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 12:01:36] 2025-10-22 19:01:04,282 | INFO     | aborting loop
[2025-10-22 12:01:36] 2025-10-22 19:01:04,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 12:01:36] 2025-10-22 19:01:04,945 | INFO     | all data control threads have been joined
[2025-10-22 12:01:36] 2025-10-22 19:01:05,105 | INFO     | all payload control threads have been joined
[2025-10-22 12:01:36] 2025-10-22 19:01:05,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 12:01:36] 2025-10-22 19:01:05,270 | INFO     | [job] queue monitor thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:05,270 | INFO     | [job] retrieve thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:05,287 | INFO     | [job] job monitor thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:05,510 | INFO     | [payload] validate_post thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:05,705 | INFO     | all job control threads have been joined
[2025-10-22 12:01:36] 2025-10-22 19:01:05,952 | INFO     | [data] control thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,087 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,109 | INFO     | [job] validate thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,110 | INFO     | [payload] control thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,487 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,538 | INFO     | [data] copytool_out thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,625 | INFO     | [data] copytool_in thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,695 | INFO     | [payload] failed_post thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:06,711 | INFO     | [job] control thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:09,195 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 12:01:36] 2025-10-22 19:01:14,742 | INFO     | [monitor] cgroup control has ended
[2025-10-22 12:01:36] 2025-10-22 19:01:15,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474680002368)>', '<ExcThread(monitor, started 140474136385280)>']
[2025-10-22 12:01:36] 2025-10-22 19:01:20,774 | INFO     | all workflow threads have been joined
[2025-10-22 12:01:36] 2025-10-22 19:01:20,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 12:01:36] 2025-10-22 19:01:20,775 | INFO     | traces error code: 0
[2025-10-22 12:01:36] 2025-10-22 19:01:20,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 12:01:36] 2025-10-22 19:01:35,354 | INFO     | PID=761825 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 12:01:36] 2025-10-22 19:01:35,355 | INFO     | .. there are 25 such processes running
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | CRITICAL | thread 'MainThread' is not alive
[2025-10-22 12:01:36] 2025-10-22 19:01:35,357 | INFO     | [monitor] control thread has ended
[2025-10-22 12:01:36] 2025-10-22 19:01:35,490 [wrapper] ==== pilot stdout END ====
[2025-10-22 12:01:36] 2025-10-22 19:01:35,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 12:01:36] 2025-10-22 19:01:35,495 [wrapper] pilotpid: 761825
[2025-10-22 12:01:36] 2025-10-22 19:01:35,497 [wrapper] Pilot exit status: 0
[2025-10-22 12:01:36] 2025-10-22 19:01:35,507 [wrapper] pandaids: 6855460727
[2025-10-22 12:01:36] 2025-10-22 19:01:35,547 [wrapper] cleanup supervisor_pilot  761831 761826
[2025-10-22 12:01:36] 2025-10-22 19:01:35,554 [wrapper] Test setup, not cleaning
[2025-10-22 12:01:36] 2025-10-22 19:01:35,556 [wrapper] apfmon messages muted
[2025-10-22 12:01:36] 2025-10-22 19:01:35,558 [wrapper] ==== wrapper stdout END ====
[2025-10-22 12:01:36] 2025-10-22 19:01:35,564 [wrapper] ==== wrapper stderr END ====
[2025-10-22 12:01:36]  *** Error codes and diagnostics ***
[2025-10-22 12:01:36]     "exeErrorCode": 65,
[2025-10-22 12:01:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 12:01:36]     "pilotErrorCode": 1305,
[2025-10-22 12:01:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 12:01:36]  *** Listing of results directory ***
[2025-10-22 12:01:36] total 188368
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc    557409 Oct 22 08:53 pilot3.tar.gz
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc      5112 Oct 22 09:41 queuedata.json
[2025-10-22 12:01:36] -rwx------. 1 boinc boinc     36292 Oct 22 09:42 runpilot2-wrapper.sh
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc       100 Oct 22 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 12:01:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 11:58 run_atlas
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc       105 Oct 22 11:58 job.xml
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc      6443 Oct 22 11:58 init_data.xml
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc 188778329 Oct 22 11:58 EVNT.46809186._000253.pool.root.1
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc     15120 Oct 22 11:58 start_atlas.sh
[2025-10-22 12:01:36] drwxrwx--x. 2 boinc boinc      4096 Oct 22 11:58 shared
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc    569672 Oct 22 11:58 input.tar.gz
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc         0 Oct 22 11:58 boinc_lockfile
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc      2491 Oct 22 11:58 pandaJob.out
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc    978039 Oct 22 11:58 agis_schedconf.cvmfs.json
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc   1560740 Oct 22 11:58 agis_ddmendpoints.agis.ALL.json
[2025-10-22 12:01:36] drwx------. 5 boinc boinc      4096 Oct 22 11:58 pilot3
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc       523 Oct 22 11:58 boinc_task_state.xml
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc       981 Oct 22 11:58 memory_monitor_summary.json
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc     21187 Oct 22 11:58 log.46809188._006648.job.log.tgz.1
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc      8397 Oct 22 12:01 heartbeat.json
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc        22 Oct 22 12:01 wrapper_checkpoint.txt
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc        95 Oct 22 12:01 pilot_heartbeat.json
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc       892 Oct 22 12:01 pilotlog.txt
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc     83163 Oct 22 12:01 log.46809188._006648.job.log.1
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc       188 Oct 22 12:01 output.list
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc       620 Oct 22 12:01 runtime_log
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc    122880 Oct 22 12:01 result.tar.gz
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc      8192 Oct 22 12:01 boinc_mmap_file
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc      8526 Oct 22 12:01 runtime_log.err
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc       645 Oct 22 12:01 DBONDm15qV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxE6NDm6klafm.diag
[2025-10-22 12:01:36] -rw-r--r--. 1 boinc boinc     21609 Oct 22 12:01 stderr.txt
[2025-10-22 12:01:36] No HITS result produced
[2025-10-22 12:01:36]  *** Contents of shared directory: ***
[2025-10-22 12:01:36] total 185056
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc 188778329 Oct 22 11:58 ATLAS.root_0
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc     15120 Oct 22 11:58 start_atlas.sh
[2025-10-22 12:01:36] -rw-r--r--. 2 boinc boinc    569672 Oct 22 11:58 input.tar.gz
[2025-10-22 12:01:36] -rw-------. 1 boinc boinc    122880 Oct 22 12:01 result.tar.gz
12:01:37 (758171): run_atlas exited; CPU time 24.252238
12:01:37 (758171): called boinc_finish(0)

</stderr_txt>
]]>

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