Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 17:47:33 (210611): vboxwrapper version 26210
2025-10-22 17:47:33 (210611): BOINC client version: 7.24.1
2025-10-22 17:47:33 (210611): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-22 17:47:33 (210611): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 17:47:33 (210611): Create VM. (boinc_4eb9feeb3f378680, slot#0)
2025-10-22 17:47:33 (210611): Setting Memory Size for VM. (4300MB)
2025-10-22 17:47:34 (210611): Setting CPU Count for VM. (3)
2025-10-22 17:47:34 (210611): Setting Chipset Options for VM.
2025-10-22 17:47:34 (210611): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 17:47:34 (210611): Setting Boot Options for VM.
2025-10-22 17:47:34 (210611): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 17:47:34 (210611): Enabling VM Network Access.
2025-10-22 17:47:34 (210611): Disabling USB Support for VM.
2025-10-22 17:47:34 (210611): Disabling COM Port Support for VM.
2025-10-22 17:47:34 (210611): Disabling LPT Port Support for VM.
2025-10-22 17:47:34 (210611): Disabling Audio Support for VM.
2025-10-22 17:47:34 (210611): Disabling Clipboard Support for VM.
2025-10-22 17:47:34 (210611): Disabling Drag and Drop Support for VM.
2025-10-22 17:47:34 (210611): Adding storage controller(s) to VM.
2025-10-22 17:47:34 (210611): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 17:47:35 (210611): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 17:47:35 (210611): forwarding host port 44477 to guest port 80
2025-10-22 17:47:35 (210611): Enabling remote desktop for VM.
2025-10-22 17:47:35 (210611): Required extension pack not installed, remote desktop not enabled.
2025-10-22 17:47:35 (210611): Enabling shared directory for VM.
2025-10-22 17:47:35 (210611): Starting VM using VBoxManage interface. (boinc_4eb9feeb3f378680, slot#0)
2025-10-22 17:47:36 (210611): Successfully started VM. (PID = '211090')
2025-10-22 17:47:36 (210611): Reporting VM Process ID to BOINC.
2025-10-22 17:47:36 (210611): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-22 17:47:36 (210611): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 17:47:36 (210611): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 17:47:36 (210611): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 17:47:36 (210611): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 17:47:36 (210611): Detected: Web Application Enabled (http://localhost:44477)
2025-10-22 17:47:36 (210611): Preference change detected
2025-10-22 17:47:36 (210611): Setting CPU throttle for VM. (80%)
2025-10-22 17:47:36 (210611): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 17:47:38 (210611): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 17:47:38 (210611): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 17:47:41 (210611): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 17:47:41 (210611): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 17:47:41 (210611): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 17:47:48 (210611): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 17:47:48 (210611): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 17:47:56 (210611): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000220 main     Log opened 2025-10-22T22:47:54.263076000Z
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000326 main     OS Product: Linux
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000359 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000383 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000406 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000407 main     Process ID: 1277
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.000408 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 17:47:56 (210611): Guest Log: 00:00:00.001612 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 17:47:56 (210611): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 17:47:56 (210611): Guest Log: [INFO] Mounting shared directory
2025-10-22 17:47:56 (210611): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 17:48:26 (210611): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 17:48:26 (210611): Guest Log: [INFO] Detected branch: prod
2025-10-22 17:48:26 (210611): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 17:48:26 (210611): Guest Log: Copying input files
2025-10-22 17:48:27 (210611): Guest Log: Copied input files into RunAtlas.
2025-10-22 17:48:27 (210611): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 17:48:27 (210611): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 17:48:27 (210611): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 17:48:27 (210611): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 17:48:53 (210611): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 17:48:53 (210611): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 17:48:53 (210611): Guest Log: 2.6.3.0 1576 0 30176 152013 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 17:48:54 (210611): Guest Log: copied the webapp to /var/www
2025-10-22 17:48:54 (210611): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-22 17:48:54 (210611): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-22 17:48:55 (210611): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 17:48:55 (210611): Guest Log:  *** Starting ATLAS job. (PandaID=6853469162 taskID=46771637) ***
2025-10-22 19:23:50 (210611): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 19:24:11 (210611): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 19:24:50 (210611): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 19:25:11 (210611): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 19:27:21 (210611): Status Report: Elapsed Time: '6000.000000'
2025-10-22 19:27:21 (210611): Status Report: CPU Time: '13353.760000'
2025-10-22 21:06:22 (210611): Status Report: Elapsed Time: '12000.000000'
2025-10-22 21:06:22 (210611): Status Report: CPU Time: '27905.440000'
2025-10-22 21:23:53 (210611): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 21:24:12 (210611): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 21:24:53 (210611): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 21:25:14 (210611): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 22:43:43 (210611): Guest Log:  *** Job finished ***
2025-10-22 22:43:43 (210611): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:15,241 | INFO     | all workflow threads have been joined
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:15,241 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:15,242 | INFO     | traces error code: 0
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:15,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,309 | INFO     | PID=5959 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,310 | INFO     | found 0 job(s) in 20 queues
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,311 | INFO     | [monitor] control thread has ended
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,418 [wrapper] ==== pilot stdout END ====
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,424 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,431 [wrapper] pilotpid: 5959
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,438 [wrapper] Pilot exit status: 0
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,504 [wrapper] pandaids: 6853469162
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,534 [wrapper] cleanup supervisor_pilot 17269 5960
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,540 [wrapper] Test setup, not cleaning
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,548 [wrapper] apfmon messages muted
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,554 [wrapper] ==== wrapper stdout END ====
2025-10-22 22:43:43 (210611): Guest Log: 2025-10-23 03:42:22,560 [wrapper] ==== wrapper stderr END ====
2025-10-22 22:43:43 (210611): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 22:43:43 (210611): Guest Log:     "exeErrorCode": 0,
2025-10-22 22:43:43 (210611): Guest Log:     "exeErrorDiag": "",
2025-10-22 22:43:43 (210611): Guest Log:     "pilotErrorCode": 0,
2025-10-22 22:43:43 (210611): Guest Log:     "pilotErrorDiag": "",
2025-10-22 22:43:43 (210611): Guest Log:  *** Listing of results directory ***
2025-10-22 22:43:43 (210611): Guest Log: total 217744
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 11:24 pilot3.tar.gz
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 12:11 queuedata.json
2025-10-22 22:43:43 (210611): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 12:14 runpilot2-wrapper.sh
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 22 22:48 start_atlas.sh
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas      6450 Oct 22 22:48 init_data.xml
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas    569679 Oct 22 22:48 input.tar.gz
2025-10-22 22:43:43 (210611): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 22:48 EVNT.46771634._003510.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 22:48 pandaJob.out
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas    978084 Oct 22 22:49 agis_schedconf.cvmfs.json
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas   1299367 Oct 22 22:50 cric_ddmendpoints.json
2025-10-22 22:43:43 (210611): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 22:50 pilot3
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas 212738102 Oct 23 03:39 HITS.46771637._086820.pool.root.1
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 23 03:39 memory_monitor_summary.json
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 23 03:40 agis_ddmendpoints.agis.ALL.json
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas    413111 Oct 23 03:40 log.46771637._086820.job.log.tgz.1
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas      7825 Oct 23 03:41 heartbeat.json
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas        95 Oct 23 03:42 pilot_heartbeat.json
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas       744 Oct 23 03:42 pilotlog.txt
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas   2134348 Oct 23 03:42 log.46771637._086820.job.log.1
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas       357 Oct 23 03:42 output.list
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 23 03:42 runtime_log
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas   2570240 Oct 23 03:42 result.tar.gz
2025-10-22 22:43:43 (210611): Guest Log: -rw-r--r--. 1 atlas atlas      8694 Oct 23 03:42 runtime_log.err
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas       677 Oct 23 03:42 kGjKDmbumV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsYhMDm3kaDSm.diag
2025-10-22 22:43:43 (210611): Guest Log: Looking for outputfile HITS.46771637._086820.pool.root.1
2025-10-22 22:43:43 (210611): Guest Log: HITS file was successfully produced
2025-10-22 22:43:43 (210611): Guest Log: -rw-------. 1 atlas atlas 212738102 Oct 23 03:39 /home/atlas/RunAtlas/HITS.46771637._086820.pool.root.1
2025-10-22 22:43:43 (210611): Guest Log: Successfully finished the ATLAS job!
2025-10-22 22:43:43 (210611): Guest Log: Copying the results back to the shared directory!
2025-10-22 22:43:44 (210611): Guest Log:  *** Contents of shared directory: ***
2025-10-22 22:43:44 (210611): Guest Log: total 226424
2025-10-22 22:43:44 (210611): Guest Log: -rw-r--r--. 1 root root 228681792 Oct 22 22:47 ATLAS.root_0
2025-10-22 22:43:44 (210611): Guest Log: -rw-r--r--. 1 root root      6450 Oct 22 22:47 init_data.xml
2025-10-22 22:43:44 (210611): Guest Log: -rw-r--r--. 1 root root    569679 Oct 22 22:47 input.tar.gz
2025-10-22 22:43:44 (210611): Guest Log: -rw-r--r--. 1 root root   2570240 Oct 23  2025 result.tar.gz
2025-10-22 22:43:44 (210611): Guest Log: -rw-r--r--. 1 root root     15120 Oct 22 22:47 start_atlas.sh
2025-10-22 22:43:44 (210611): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 22:43:44 (210611): VM Completion File Detected.
2025-10-22 22:43:44 (210611): Powering off VM.
2025-10-22 22:43:44 (210611): Successfully stopped VM.
2025-10-22 22:43:44 (210611): Deregistering VM. (boinc_4eb9feeb3f378680, slot#0)
2025-10-22 22:43:44 (210611): Removing network bandwidth throttle group from VM.
2025-10-22 22:43:44 (210611): Removing VM from VirtualBox.
2025-10-22 22:43:50 (210611): called boinc_finish(0)

</stderr_txt>
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