Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:21:05 (3905742): wrapper (7.7.26015): starting
14:21:05 (3905742): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 14:21:05] Arguments: --nthreads 8
[2025-10-22 14:21:05] Threads: 8
[2025-10-22 14:21:05] Checking for CVMFS
[2025-10-22 14:21:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 14:21:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 14:21:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 14:21:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 14:21:07] 2.13.2.0 1448902 144013 751260 152005 1 118 13223869 21551104 17212 16776704 0 113906338 99.470 152380132 28745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 14:21:07] CVMFS is ok
[2025-10-22 14:21:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 14:21:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 14:21:07] Further information can be found at the LHC@home message board.
[2025-10-22 14:21:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 14:21:07] Checking for apptainer binary...
[2025-10-22 14:21:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 14:21:07] Running /usr/bin/apptainer --version
[2025-10-22 14:21:07] apptainer version 1.4.3-1.el9
[2025-10-22 14:21:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 14:21:08] c-16-30.aglt2.org
[2025-10-22 14:21:08] apptainer works
[2025-10-22 14:21:08] Set ATHENA_PROC_NUMBER=8
[2025-10-22 14:21:08] Set ATHENA_CORE_NUMBER=8
[2025-10-22 14:21:08] Starting ATLAS job with PandaID=6853467522
[2025-10-22 14:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:40:03 (3905742): BOINC client no longer exists - exiting
16:40:03 (3905742): timer handler: client dead, exiting
17:30:45 (609780): wrapper (7.7.26015): starting
17:30:45 (609780): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 17:30:45] Arguments: --nthreads 8
[2025-10-22 17:30:45] Threads: 8
[2025-10-22 17:30:45] This job has been restarted, cleaning up previous attempt
[2025-10-22 17:30:45] Checking for CVMFS
[2025-10-22 17:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 17:30:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 17:30:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 17:30:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 17:30:47] 2.13.2.0 1448902 144203 752612 152011 3 29 16086050 21551105 16130 16776704 0 114768274 99.472 153103059 28730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 17:30:47] CVMFS is ok
[2025-10-22 17:30:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 17:30:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 17:30:47] Further information can be found at the LHC@home message board.
[2025-10-22 17:30:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 17:30:47] Checking for apptainer binary...
[2025-10-22 17:30:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 17:30:47] Running /usr/bin/apptainer --version
[2025-10-22 17:30:47] apptainer version 1.4.3-1.el9
[2025-10-22 17:30:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 17:30:48] c-16-30.aglt2.org
[2025-10-22 17:30:48] apptainer works
[2025-10-22 17:30:48] Set ATHENA_PROC_NUMBER=8
[2025-10-22 17:30:48] Set ATHENA_CORE_NUMBER=8
[2025-10-22 17:30:48] Starting ATLAS job with PandaID=6853467522
[2025-10-22 17:30:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 00:41:01]  *** The last 200 lines of the pilot log: ***
[2025-10-23 00:41:01] 2025-10-23 04:40:22,862 | INFO     | monitor loop #1649: job 0:6853467522 is in state 'finished'
[2025-10-23 00:41:01] 2025-10-23 04:40:22,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-23 00:41:01] 2025-10-23 04:40:22,895 | INFO     | time since job start (25691s) is within the limit (172800.0s)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,235 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-23 00:41:01] 2025-10-23 04:40:23,244 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.994849999999
[2025-10-23 00:41:01] 2025-10-23 04:40:23,256 | INFO     | using path: /var/lib/condor/boinchome/slots/2/PanDA_Pilot-6853467522/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,257 | INFO     | extracted standard info from prmon json
[2025-10-23 00:41:01] 2025-10-23 04:40:23,257 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 00:41:01] 2025-10-23 04:40:23,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 00:41:01] 2025-10-23 04:40:23,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 00:41:01] 2025-10-23 04:40:23,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 00:41:01] 2025-10-23 04:40:23,272 | INFO     | fitting pss+swap vs Time
[2025-10-23 00:41:01] 2025-10-23 04:40:23,273 | INFO     | sum of square deviations: 22809589254.181347
[2025-10-23 00:41:01] 2025-10-23 04:40:23,280 | INFO     | sum of deviations: -31946313476.684975
[2025-10-23 00:41:01] 2025-10-23 04:40:23,280 | INFO     | mean x: 1761181614.0954654
[2025-10-23 00:41:01] 2025-10-23 04:40:23,281 | INFO     | mean y: 2129656.692124105
[2025-10-23 00:41:01] 2025-10-23 04:40:23,281 | INFO     | -- intersect: 2468779069.1954136
[2025-10-23 00:41:01] 2025-10-23 04:40:23,281 | INFO     | intersect: 2468779069.1954136
[2025-10-23 00:41:01] 2025-10-23 04:40:23,282 | INFO     | chi2: 3.436852527229307
[2025-10-23 00:41:01] 2025-10-23 04:40:23,283 | INFO     | sum of square deviations: 22002730511.635246
[2025-10-23 00:41:01] 2025-10-23 04:40:23,290 | INFO     | sum of deviations: -8767739119.475843
[2025-10-23 00:41:01] 2025-10-23 04:40:23,290 | INFO     | mean x: 1761181461.5966184
[2025-10-23 00:41:01] 2025-10-23 04:40:23,291 | INFO     | mean y: 2133996.374396135
[2025-10-23 00:41:01] 2025-10-23 04:40:23,291 | INFO     | -- intersect: 703936874.393134
[2025-10-23 00:41:01] 2025-10-23 04:40:23,291 | INFO     | intersect: 703936874.393134
[2025-10-23 00:41:01] 2025-10-23 04:40:23,292 | INFO     | chi2: 2.752677283697328
[2025-10-23 00:41:01] 2025-10-23 04:40:23,292 | INFO     | current chi2=2.752677283697328 (change=19.9070294146005 %)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,293 | INFO     | right removable region: 413
[2025-10-23 00:41:01] 2025-10-23 04:40:23,294 | INFO     | sum of square deviations: 22002706111.63524
[2025-10-23 00:41:01] 2025-10-23 04:40:23,302 | INFO     | sum of deviations: -102998533831.74164
[2025-10-23 00:41:01] 2025-10-23 04:40:23,307 | INFO     | mean x: 1761181766.5966184
[2025-10-23 00:41:01] 2025-10-23 04:40:23,307 | INFO     | mean y: 2143038.756038647
[2025-10-23 00:41:01] 2025-10-23 04:40:23,307 | INFO     | -- intersect: 8246544379.676678
[2025-10-23 00:41:01] 2025-10-23 04:40:23,307 | INFO     | intersect: 8246544379.676678
[2025-10-23 00:41:01] 2025-10-23 04:40:23,308 | INFO     | chi2: 1.5784780537500978
[2025-10-23 00:41:01] 2025-10-23 04:40:23,308 | INFO     | current chi2=1.5784780537500978 (change=54.07198763274774 %)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,309 | INFO     | sum of square deviations: 21215079144.087982
[2025-10-23 00:41:01] 2025-10-23 04:40:23,316 | INFO     | sum of deviations: -114641979645.92911
[2025-10-23 00:41:01] 2025-10-23 04:40:23,316 | INFO     | mean x: 1761181919.0977995
[2025-10-23 00:41:01] 2025-10-23 04:40:23,317 | INFO     | mean y: 2145276.523227384
[2025-10-23 00:41:01] 2025-10-23 04:40:23,317 | INFO     | -- intersect: 9519214732.201096
[2025-10-23 00:41:01] 2025-10-23 04:40:23,317 | INFO     | intersect: 9519214732.201096
[2025-10-23 00:41:01] 2025-10-23 04:40:23,318 | INFO     | chi2: 1.4615953947183917
[2025-10-23 00:41:01] 2025-10-23 04:40:23,318 | INFO     | current chi2=1.4615953947183917 (change=7.40476934437067 %)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,318 | INFO     | left removable region: 20
[2025-10-23 00:41:01] 2025-10-23 04:40:23,319 | INFO     | sum of square deviations: 18821394735.928806
[2025-10-23 00:41:01] 2025-10-23 04:40:23,324 | INFO     | sum of deviations: -58505278010.02035
[2025-10-23 00:41:01] 2025-10-23 04:40:23,324 | INFO     | mean x: 1761182041.1017811
[2025-10-23 00:41:01] 2025-10-23 04:40:23,324 | INFO     | mean y: 2142991.600508906
[2025-10-23 00:41:01] 2025-10-23 04:40:23,324 | INFO     | -- intersect: 5476681217.198698
[2025-10-23 00:41:01] 2025-10-23 04:40:23,324 | INFO     | intersect: 5476681217.198698
[2025-10-23 00:41:01] 2025-10-23 04:40:23,325 | INFO     | chi2: 0.6609159816913378
[2025-10-23 00:41:01] 2025-10-23 04:40:23,325 | INFO     | -- intersect: 5476681217.198698
[2025-10-23 00:41:01] 2025-10-23 04:40:23,326 | INFO     | current memory leak: -3.11 B/s (using 393 data points, chi2=0.66)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,326 | INFO     | could have reported an average CPU frequency of 2899 MHz (18 samples)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,327 | INFO     | ..............................
[2025-10-23 00:41:01] 2025-10-23 04:40:23,327 | INFO     | . Timing measurements:
[2025-10-23 00:41:01] 2025-10-23 04:40:23,327 | INFO     | . get job = 0 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,327 | INFO     | . initial setup = 17 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,327 | INFO     | . payload setup = 38 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,328 | INFO     | . stage-in = 0 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,328 | INFO     | . payload execution = 25553 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,328 | INFO     | . stage-out = 9 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,328 | INFO     | . log creation = 0 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,328 | INFO     | ..............................
[2025-10-23 00:41:01] 2025-10-23 04:40:23,522 | INFO     | 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,522 | INFO     | job summary report
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | --------------------------------------------------
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | PanDA job id: 6853467522
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | task id: 46771637
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | errors: (none)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,523 | INFO     | pilot state: finished 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | transexitcode: 0
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | exeerrorcode: 0
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | exeerrordiag: 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | exitcode: 0
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | exitmsg: OK
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | cpuconsumptiontime: 84497 s
[2025-10-23 00:41:01] 2025-10-23 04:40:23,524 | INFO     | nevents: 400
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | neventsw: 0
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | pid: 626949
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | pgrp: 626949
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | corecount: 8
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | event service: False
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | sizes: {0: 2348103, 1: 2348799, 2: 2348827, 3: 2349026, 14: 2349026, 25: 2349054, 32: 2349472, 36: 2349500, 25596: 2385753, 25607: 2394801, 25608: 2394857, 25629: 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,525 | INFO     | --------------------------------------------------
[2025-10-23 00:41:01] 2025-10-23 04:40:23,526 | INFO     | 
[2025-10-23 00:41:01] 2025-10-23 04:40:23,526 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/2
[2025-10-23 00:41:01] 2025-10-23 04:40:23,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 00:41:01] 2025-10-23 04:40:23,610 | INFO     | job 6853467522 has completed (purged errors)
[2025-10-23 00:41:01] 2025-10-23 04:40:23,610 | INFO     | overall cleanup function is called
[2025-10-23 00:41:01] 2025-10-23 04:40:24,619 | INFO     | --- collectZombieJob: --- 10, [626949]
[2025-10-23 00:41:01] 2025-10-23 04:40:24,619 | INFO     | zombie collector waiting for pid 626949
[2025-10-23 00:41:01] 2025-10-23 04:40:24,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 00:41:01] 2025-10-23 04:40:24,620 | INFO     | collected zombie processes
[2025-10-23 00:41:01] 2025-10-23 04:40:24,620 | INFO     | will attempt to kill all subprocesses of pid=626949
[2025-10-23 00:41:01] 2025-10-23 04:40:25,075 | INFO     | process IDs to be killed: [626949] (in reverse order)
[2025-10-23 00:41:01] 2025-10-23 04:40:25,457 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 00:41:01] 2025-10-23 04:40:25,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 00:41:01] 2025-10-23 04:40:25,501 | INFO     | did not find any defunct processes belonging to 626949
[2025-10-23 00:41:01] 2025-10-23 04:40:25,524 | INFO     | did not find any defunct processes belonging to 626949
[2025-10-23 00:41:01] 2025-10-23 04:40:25,525 | INFO     | ready for new job
[2025-10-23 00:41:01] 2025-10-23 04:40:25,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 00:41:01] 2025-10-23 04:40:25,527 | INFO     | ***************************************
[2025-10-23 00:41:01] 2025-10-23 04:40:25,527 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 00:41:01] 2025-10-23 04:40:25,528 | INFO     | ***************************************
[2025-10-23 00:41:01] 2025-10-23 04:40:25,528 | INFO     | 
[2025-10-23 00:41:01] 2025-10-23 04:40:25,543 | INFO     | architecture information:
[2025-10-23 00:41:01] 2025-10-23 04:40:25,587 | INFO     | executing command: cat /etc/os-release
[2025-10-23 00:41:01] 2025-10-23 04:40:25,642 | INFO     | cat /etc/os-release:
[2025-10-23 00:41:01] NAME="CentOS Linux"
[2025-10-23 00:41:01] VERSION="7 (Core)"
[2025-10-23 00:41:01] ID="centos"
[2025-10-23 00:41:01] ID_LIKE="rhel fedora"
[2025-10-23 00:41:01] VERSION_ID="7"
[2025-10-23 00:41:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 00:41:01] ANSI_COLOR="0;31"
[2025-10-23 00:41:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 00:41:01] HOME_URL="https://www.centos.org/"
[2025-10-23 00:41:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 00:41:01] 
[2025-10-23 00:41:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 00:41:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 00:41:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 00:41:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 00:41:01] 
[2025-10-23 00:41:01] 2025-10-23 04:40:25,643 | INFO     | ***************************************
[2025-10-23 00:41:01] 2025-10-23 04:40:26,147 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/2
[2025-10-23 00:41:01] 2025-10-23 04:40:26,192 | INFO     | sufficient remaining disk space (1829561696256 B)
[2025-10-23 00:41:01] 2025-10-23 04:40:26,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 00:41:01] 2025-10-23 04:40:26,192 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 00:41:01] 2025-10-23 04:40:26,192 | INFO     | update_server=False
[2025-10-23 00:41:01] 2025-10-23 04:40:26,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 00:41:01] 2025-10-23 04:40:26,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 00:41:01] 2025-10-23 04:40:26,380 | INFO     | aborting loop
[2025-10-23 00:41:01] 2025-10-23 04:40:26,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 00:41:01] 2025-10-23 04:40:27,043 | INFO     | all data control threads have been joined
[2025-10-23 00:41:01] 2025-10-23 04:40:27,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 00:41:01] 2025-10-23 04:40:27,200 | INFO     | [job] retrieve thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,227 | INFO     | all job control threads have been joined
[2025-10-23 00:41:01] 2025-10-23 04:40:27,227 | INFO     | all payload control threads have been joined
[2025-10-23 00:41:01] 2025-10-23 04:40:27,388 | INFO     | [job] job monitor thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,405 | INFO     | [payload] failed_post thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,540 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,617 | INFO     | [job] validate thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:27,796 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,049 | INFO     | [data] control thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,244 | INFO     | [job] control thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,251 | INFO     | [payload] control thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,382 | INFO     | [data] copytool_in thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 00:41:01] 2025-10-23 04:40:28,518 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:28,702 | INFO     | [payload] validate_post thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:29,150 | INFO     | [data] copytool_out thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:29,520 | INFO     | [job] queue monitor thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:30,456 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 00:41:01] 2025-10-23 04:40:54,951 | INFO     | [monitor] cgroup control has ended
[2025-10-23 00:41:01] 2025-10-23 04:40:55,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391864096576)>', '<ExcThread(monitor, started 140391072397056)>']
[2025-10-23 00:41:01] 2025-10-23 04:40:56,586 | INFO     | PID=616702 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-23 00:41:01] 2025-10-23 04:40:56,587 | INFO     | .. there are 12 such processes running
[2025-10-23 00:41:01] 2025-10-23 04:40:56,588 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 00:41:01] 2025-10-23 04:40:56,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 00:41:01] 2025-10-23 04:40:56,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 00:41:01] 2025-10-23 04:40:56,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 00:41:01] 2025-10-23 04:40:56,588 | INFO     | [monitor] control thread has ended
[2025-10-23 00:41:01] 2025-10-23 04:41:01,001 | INFO     | all workflow threads have been joined
[2025-10-23 00:41:01] 2025-10-23 04:41:01,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 00:41:01] 2025-10-23 04:41:01,002 | INFO     | traces error code: 0
[2025-10-23 00:41:01] 2025-10-23 04:41:01,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 00:41:01] 2025-10-23 04:41:01,225 [wrapper] ==== pilot stdout END ====
[2025-10-23 00:41:01] 2025-10-23 04:41:01,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 00:41:01] 2025-10-23 04:41:01,242 [wrapper] pilotpid: 616702
[2025-10-23 00:41:01] 2025-10-23 04:41:01,253 [wrapper] Pilot exit status: 0
[2025-10-23 00:41:01] 2025-10-23 04:41:01,292 [wrapper] pandaids: 6853467522 6853467522
[2025-10-23 00:41:01] 2025-10-23 04:41:01,393 [wrapper] cleanup supervisor_pilot 2159004 616703
[2025-10-23 00:41:01] 2025-10-23 04:41:01,399 [wrapper] Test setup, not cleaning
[2025-10-23 00:41:01] 2025-10-23 04:41:01,404 [wrapper] apfmon messages muted
[2025-10-23 00:41:01] 2025-10-23 04:41:01,408 [wrapper] ==== wrapper stdout END ====
[2025-10-23 00:41:01] 2025-10-23 04:41:01,412 [wrapper] ==== wrapper stderr END ====
[2025-10-23 00:41:01]  *** Error codes and diagnostics ***
[2025-10-23 00:41:01]     "exeErrorCode": 0,
[2025-10-23 00:41:01]     "exeErrorDiag": "",
[2025-10-23 00:41:01]     "pilotErrorCode": 0,
[2025-10-23 00:41:01]     "pilotErrorDiag": "",
[2025-10-23 00:41:01]  *** Listing of results directory ***
[2025-10-23 00:41:01] total 653472
[2025-10-23 00:41:01] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 06:11 pilot3.tar.gz
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 07:11 queuedata.json
[2025-10-23 00:41:01] -rwx------. 1 boincer umatlas     36292 Oct 22 07:15 runpilot2-wrapper.sh
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas       100 Oct 22 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 00:41:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 22 14:21 run_atlas
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas       105 Oct 22 14:21 job.xml
[2025-10-23 00:41:01] -rw-r--r--. 3 boincer umatlas 228049419 Oct 22 14:21 EVNT.46771634._003473.pool.root.1
[2025-10-23 00:41:01] -rw-r--r--. 3 boincer umatlas 228049419 Oct 22 14:21 ATLAS.root_0
[2025-10-23 00:41:01] -rw-r--r--. 2 boincer umatlas    569678 Oct 22 14:21 input.tar.gz
[2025-10-23 00:41:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 14:21 start_atlas.sh
[2025-10-23 00:41:01] drwxrwx--x. 2 boincer umatlas        68 Oct 22 14:21 shared
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas         0 Oct 22 14:21 boinc_lockfile
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas      2560 Oct 22 17:30 pandaJob.out
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas    978092 Oct 22 17:31 agis_schedconf.cvmfs.json
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas      6549 Oct 23 00:36 init_data.xml
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas 201165070 Oct 23 00:39 HITS.46771637._086079.pool.root.1
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas       532 Oct 23 00:39 boinc_task_state.xml
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas      1050 Oct 23 00:39 memory_monitor_summary.json
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas   1560740 Oct 23 00:39 agis_ddmendpoints.agis.ALL.json
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas    631354 Oct 23 00:40 log.46771637._086079.job.log.tgz.1
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas      7819 Oct 23 00:40 heartbeat.json
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 23 00:40 boinc_mmap_file
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas        29 Oct 23 00:40 wrapper_checkpoint.txt
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas        97 Oct 23 00:40 pilot_heartbeat.json
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas      4836 Oct 23 00:41 pilotlog.txt
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas   3365003 Oct 23 00:41 log.46771637._086079.job.log.1
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas       357 Oct 23 00:41 output.list
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas       620 Oct 23 00:41 runtime_log
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas   4014080 Oct 23 00:41 result.tar.gz
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas      8938 Oct 23 00:41 runtime_log.err
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas       782 Oct 23 00:41 MrIKDmJzlV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrY5NDmEqGssm.diag
[2025-10-23 00:41:01] -rw-r--r--. 1 boincer umatlas     23575 Oct 23 00:41 stderr.txt
[2025-10-23 00:41:01] HITS file was successfully produced:
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas 201165070 Oct 23 00:39 shared/HITS.pool.root.1
[2025-10-23 00:41:01]  *** Contents of shared directory: ***
[2025-10-23 00:41:01] total 423660
[2025-10-23 00:41:01] -rw-r--r--. 3 boincer umatlas 228049419 Oct 22 14:21 ATLAS.root_0
[2025-10-23 00:41:01] -rw-r--r--. 2 boincer umatlas    569678 Oct 22 14:21 input.tar.gz
[2025-10-23 00:41:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 14:21 start_atlas.sh
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas 201165070 Oct 23 00:39 HITS.pool.root.1
[2025-10-23 00:41:01] -rw-------. 1 boincer umatlas   4014080 Oct 23 00:41 result.tar.gz
00:41:03 (609780): run_atlas exited; CPU time 85721.770863
00:41:03 (609780): called boinc_finish(0)

</stderr_txt>
]]>

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