Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 12:02:15 (7720): vboxwrapper version 26210
2025-10-22 12:02:15 (7720): BOINC client version: 8.2.4
2025-10-22 12:02:15 (7720): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-10-22 12:02:15 (7720): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 12:02:16 (7720): Create VM. (boinc_fe9c605de7b2c6b5, slot#2)
2025-10-22 12:02:16 (7720): Setting Memory Size for VM. (4400MB)
2025-10-22 12:02:16 (7720): Setting CPU Count for VM. (4)
2025-10-22 12:02:17 (7720): Setting Chipset Options for VM.
2025-10-22 12:02:17 (7720): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 12:02:17 (7720): Setting Boot Options for VM.
2025-10-22 12:02:18 (7720): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 12:02:18 (7720): Enabling VM Network Access.
2025-10-22 12:02:18 (7720): Disabling USB Support for VM.
2025-10-22 12:02:18 (7720): Disabling COM Port Support for VM.
2025-10-22 12:02:19 (7720): Disabling LPT Port Support for VM.
2025-10-22 12:02:19 (7720): Disabling Audio Support for VM.
2025-10-22 12:02:19 (7720): Disabling Clipboard Support for VM.
2025-10-22 12:02:19 (7720): Disabling Drag and Drop Support for VM.
2025-10-22 12:02:20 (7720): Adding storage controller(s) to VM.
2025-10-22 12:02:20 (7720): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 12:02:20 (7720): Adding VirtualBox Guest Additions to VM.
2025-10-22 12:02:21 (7720): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 12:02:21 (7720): forwarding host port 53627 to guest port 80
2025-10-22 12:02:21 (7720): Enabling remote desktop for VM.
2025-10-22 12:02:21 (7720): Required extension pack not installed, remote desktop not enabled.
2025-10-22 12:02:21 (7720): Enabling shared directory for VM.
2025-10-22 12:02:22 (7720): Starting VM using VBoxManage interface. (boinc_fe9c605de7b2c6b5, slot#2)
2025-10-22 12:02:27 (7720): Successfully started VM. (PID = '14636')
2025-10-22 12:02:27 (7720): Reporting VM Process ID to BOINC.
2025-10-22 12:02:27 (7720): Guest Log: BIOS: VirtualBox 7.2.0
2025-10-22 12:02:27 (7720): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 12:02:27 (7720): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 12:02:27 (7720): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 12:02:27 (7720): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 12:02:27 (7720): Detected: Web Application Enabled (http://localhost:53627)
2025-10-22 12:02:27 (7720): Preference change detected
2025-10-22 12:02:27 (7720): Setting CPU throttle for VM. (80%)
2025-10-22 12:02:27 (7720): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 12:02:29 (7720): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 12:02:29 (7720): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 12:02:32 (7720): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 12:02:32 (7720): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 12:02:32 (7720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 12:02:40 (7720): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 12:02:40 (7720): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 12:02:51 (7720): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000188 main     Log opened 2025-10-22T12:02:48.728206000Z
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000305 main     OS Product: Linux
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000346 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000378 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000410 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000410 main     Process ID: 1311
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.000411 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 12:02:51 (7720): Guest Log: 00:00:00.003046 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 12:02:51 (7720): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 12:02:51 (7720): Guest Log: [INFO] Mounting shared directory
2025-10-22 12:02:51 (7720): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 12:02:55 (7720): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 12:02:55 (7720): Guest Log: [INFO] Detected branch: prod
2025-10-22 12:02:55 (7720): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 12:02:55 (7720): Guest Log: Copying input files
2025-10-22 12:02:57 (7720): Guest Log: Copied input files into RunAtlas.
2025-10-22 12:02:57 (7720): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 12:02:57 (7720): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 12:02:57 (7720): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 12:02:57 (7720): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 12:03:01 (7720): Guest Log: 00:00:10.010847 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 418 521 000ns (GuestNow=1 761 148 980 156 671 000 ns GuestLast=1 761 134 568 738 150 000 ns fSetTimeLastLoop=true )
2025-10-22 12:03:26 (7720): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 12:03:27 (7720): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 12:03:27 (7720): Guest Log: 2.6.3.0 1588 0 32176 152000 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 12:03:28 (7720): Guest Log: copied the webapp to /var/www
2025-10-22 12:03:28 (7720): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-22 12:03:28 (7720): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-22 12:03:29 (7720): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 12:03:29 (7720): Guest Log:  *** Starting ATLAS job. (PandaID=6853623752 taskID=46771637) ***
2025-10-22 13:42:29 (7720): Status Report: Elapsed Time: '6000.000000'
2025-10-22 13:42:29 (7720): Status Report: CPU Time: '10415.437500'
2025-10-22 15:22:31 (7720): Status Report: Elapsed Time: '12000.000000'
2025-10-22 15:22:31 (7720): Status Report: CPU Time: '21907.421875'
2025-10-22 17:02:33 (7720): Status Report: Elapsed Time: '18000.000000'
2025-10-22 17:02:33 (7720): Status Report: CPU Time: '34606.046875'
2025-10-22 18:42:36 (7720): Status Report: Elapsed Time: '24000.000000'
2025-10-22 18:42:36 (7720): Status Report: CPU Time: '46613.718750'
2025-10-22 18:53:27 (7720): Guest Log:  *** Job finished ***
2025-10-22 18:53:27 (7720): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:52:26,788 | INFO     | [job] queue monitor thread has finished
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:52:28,719 | INFO     | [data] queue_monitor thread has finished
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:17,492 | INFO     | [monitor] cgroup control has ended
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:18,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475684190016)>', '<ExcThread(monitor, started 140475377882880)>']
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:18,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:18,538 | INFO     | [monitor] control thread has ended
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,103 | INFO     | all workflow threads have been joined
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,103 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,103 | INFO     | traces error code: 0
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,250 [wrapper] ==== pilot stdout END ====
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,267 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,290 [wrapper] pilotpid: 6000
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,320 [wrapper] Pilot exit status: 0
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,453 [wrapper] pandaids: 6853623752
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,564 [wrapper] cleanup supervisor_pilot 29287 6001
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,595 [wrapper] Test setup, not cleaning
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,606 [wrapper] apfmon messages muted
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,618 [wrapper] ==== wrapper stdout END ====
2025-10-22 18:53:27 (7720): Guest Log: 2025-10-22 22:53:23,639 [wrapper] ==== wrapper stderr END ====
2025-10-22 18:53:27 (7720): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 18:53:27 (7720): Guest Log:     "exeErrorCode": 0,
2025-10-22 18:53:27 (7720): Guest Log:     "exeErrorDiag": "",
2025-10-22 18:53:27 (7720): Guest Log:     "pilotErrorCode": 0,
2025-10-22 18:53:27 (7720): Guest Log:     "pilotErrorDiag": "",
2025-10-22 18:53:27 (7720): Guest Log:  *** Listing of results directory ***
2025-10-22 18:53:27 (7720): Guest Log: total 217788
2025-10-22 18:53:27 (7720): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 12:45 pilot3.tar.gz
2025-10-22 18:53:27 (7720): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 13:25 queuedata.json
2025-10-22 18:53:27 (7720): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 13:28 runpilot2-wrapper.sh
2025-10-22 18:53:27 (7720): Guest Log: -rwxr-xr-x. 1 atlas atlas      9005 Oct 22 16:02 init_data.xml
2025-10-22 18:53:27 (7720): Guest Log: -rwxr-xr-x. 1 atlas atlas    569685 Oct 22 16:02 input.tar.gz
2025-10-22 18:53:27 (7720): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 16:02 start_atlas.sh
2025-10-22 18:53:27 (7720): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 16:02 EVNT.46771634._002281.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 18:53:27 (7720): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 16:03 pandaJob.out
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas    978039 Oct 22 16:04 agis_schedconf.cvmfs.json
2025-10-22 18:53:27 (7720): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 16:04 pilot3
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas 211851475 Oct 22 22:51 HITS.46771637._087789.pool.root.1
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 22 22:51 memory_monitor_summary.json
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 22:51 agis_ddmendpoints.agis.ALL.json
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas    521469 Oct 22 22:51 log.46771637._087789.job.log.tgz.1
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 22:52 pilot_heartbeat.json
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas      7813 Oct 22 22:52 heartbeat.json
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 22 22:53 pilotlog.txt
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas   3140877 Oct 22 22:53 log.46771637._087789.job.log.1
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 22:53 output.list
2025-10-22 18:53:27 (7720): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 22:53 runtime_log
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas   3686400 Oct 22 22:53 result.tar.gz
2025-10-22 18:53:27 (7720): Guest Log: -rw-r--r--. 1 atlas atlas      8604 Oct 22 22:53 runtime_log.err
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas       647 Oct 22 22:53 EYCODmt3nV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFr5NDmaj0AEn.diag
2025-10-22 18:53:27 (7720): Guest Log: Looking for outputfile HITS.46771637._087789.pool.root.1
2025-10-22 18:53:27 (7720): Guest Log: HITS file was successfully produced
2025-10-22 18:53:27 (7720): Guest Log: -rw-------. 1 atlas atlas 211851475 Oct 22 22:51 /home/atlas/RunAtlas/HITS.46771637._087789.pool.root.1
2025-10-22 18:53:30 (7720): Guest Log: Successfully finished the ATLAS job!
2025-10-22 18:53:30 (7720): Guest Log: Copying the results back to the shared directory!
2025-10-22 18:53:30 (7720): Guest Log:  *** Contents of shared directory: ***
2025-10-22 18:53:30 (7720): Guest Log: total 435104
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root 229400906 Oct 22 16:02 ATLAS.root_0
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root 211851475 Oct 22 22:53 HITS.pool.root.1
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root      9005 Oct 22 16:02 init_data.xml
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root    569685 Oct 22 16:02 input.tar.gz
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root   3686400 Oct 22 22:53 result.tar.gz
2025-10-22 18:53:30 (7720): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 22 16:02 start_atlas.sh
2025-10-22 18:53:30 (7720): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 18:53:30 (7720): VM Completion File Detected.
2025-10-22 18:53:30 (7720): Powering off VM.
2025-10-22 18:53:30 (7720): Successfully stopped VM.
2025-10-22 18:53:30 (7720): Deregistering VM. (boinc_fe9c605de7b2c6b5, slot#2)
2025-10-22 18:53:30 (7720): Removing network bandwidth throttle group from VM.
2025-10-22 18:53:31 (7720): Removing VM from VirtualBox.
2025-10-22 18:53:36 (7720): called boinc_finish(0)

</stderr_txt>
]]>

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