Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 07:17:15 (7412): vboxwrapper version 26210
2025-10-22 07:17:15 (7412): BOINC client version: 8.0.2
2025-10-22 07:17:16 (7412): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-22 07:17:16 (7412): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 07:17:17 (7412): Create VM. (boinc_d047612bb09f1d77, slot#6)
2025-10-22 07:17:17 (7412): Setting Memory Size for VM. (4600MB)
2025-10-22 07:17:17 (7412): Setting CPU Count for VM. (6)
2025-10-22 07:17:18 (7412): Setting Chipset Options for VM.
2025-10-22 07:17:18 (7412): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 07:17:18 (7412): Setting Boot Options for VM.
2025-10-22 07:17:19 (7412): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 07:17:19 (7412): Enabling VM Network Access.
2025-10-22 07:17:19 (7412): Disabling USB Support for VM.
2025-10-22 07:17:20 (7412): Disabling COM Port Support for VM.
2025-10-22 07:17:20 (7412): Disabling LPT Port Support for VM.
2025-10-22 07:17:20 (7412): Disabling Audio Support for VM.
2025-10-22 07:17:20 (7412): Disabling Clipboard Support for VM.
2025-10-22 07:17:21 (7412): Disabling Drag and Drop Support for VM.
2025-10-22 07:17:21 (7412): Adding storage controller(s) to VM.
2025-10-22 07:17:21 (7412): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 07:17:22 (7412): Adding VirtualBox Guest Additions to VM.
2025-10-22 07:17:22 (7412): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 07:17:22 (7412): forwarding host port 3320 to guest port 80
2025-10-22 07:17:23 (7412): Enabling remote desktop for VM.
2025-10-22 07:17:23 (7412): Required extension pack not installed, remote desktop not enabled.
2025-10-22 07:17:23 (7412): Enabling shared directory for VM.
2025-10-22 07:17:24 (7412): Starting VM using VBoxManage interface. (boinc_d047612bb09f1d77, slot#6)
2025-10-22 07:17:32 (7412): Successfully started VM. (PID = '4008')
2025-10-22 07:17:32 (7412): Reporting VM Process ID to BOINC.
2025-10-22 07:17:32 (7412): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-22 07:17:32 (7412): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 07:17:32 (7412): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 07:17:32 (7412): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 07:17:32 (7412): Detected: Web Application Enabled (http://localhost:3320)
2025-10-22 07:17:32 (7412): Preference change detected
2025-10-22 07:17:32 (7412): Setting CPU throttle for VM. (100%)
2025-10-22 07:17:32 (7412): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 07:17:34 (7412): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 07:17:34 (7412): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 07:17:38 (7412): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 07:17:38 (7412): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 07:17:38 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 07:17:48 (7412): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 07:17:48 (7412): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-22 07:18:04 (7412): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000432 main     Log opened 2025-10-22T07:18:02.530711000Z
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000640 main     OS Product: Linux
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000724 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000801 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000879 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000882 main     Process ID: 1357
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.000884 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 07:18:04 (7412): Guest Log: 00:00:00.002491 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 07:18:05 (7412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 07:18:05 (7412): Guest Log: [INFO] Mounting shared directory
2025-10-22 07:18:05 (7412): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 07:18:14 (7412): Guest Log: 00:00:10.057656 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 824 333 000ns (GuestNow=1 761 142 694 360 098 000 ns GuestLast=1 761 117 482 535 765 000 ns fSetTimeLastLoop=true )
2025-10-22 07:18:18 (7412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 07:18:18 (7412): Guest Log: [INFO] Detected branch: prod
2025-10-22 07:18:18 (7412): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 07:18:18 (7412): Guest Log: Copying input files
2025-10-22 07:18:22 (7412): Guest Log: Copied input files into RunAtlas.
2025-10-22 07:18:22 (7412): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 07:18:22 (7412): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 07:18:22 (7412): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 07:18:22 (7412): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 07:18:33 (7412): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 07:18:33 (7412): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 07:18:33 (7412): Guest Log: 2.6.3.0 1638 0 32216 151998 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 07:18:35 (7412): Guest Log: copied the webapp to /var/www
2025-10-22 07:18:35 (7412): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-22 07:18:35 (7412): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-22 07:18:36 (7412): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 07:18:36 (7412): Guest Log:  *** Starting ATLAS job. (PandaID=6853254783 taskID=46771637) ***
2025-10-22 08:58:01 (7412): Status Report: Elapsed Time: '6000.000000'
2025-10-22 08:58:01 (7412): Status Report: CPU Time: '29660.984375'
2025-10-22 10:38:28 (7412): Status Report: Elapsed Time: '12000.000000'
2025-10-22 10:38:28 (7412): Status Report: CPU Time: '65549.031250'
2025-10-22 12:18:58 (7412): Status Report: Elapsed Time: '18000.000000'
2025-10-22 12:18:58 (7412): Status Report: CPU Time: '100241.312500'
2025-10-22 13:59:14 (7412): Status Report: Elapsed Time: '24000.000000'
2025-10-22 13:59:14 (7412): Status Report: CPU Time: '134174.953125'
2025-10-22 15:39:23 (7412): Status Report: Elapsed Time: '30000.000000'
2025-10-22 15:39:23 (7412): Status Report: CPU Time: '168443.281250'
2025-10-22 16:30:35 (7412): Guest Log:  *** Job finished ***
2025-10-22 16:30:35 (7412): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:29,957 | INFO     | all workflow threads have been joined
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:29,957 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:29,957 | INFO     | traces error code: 0
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:29,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,464 | INFO     | PID=6050 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,465 | INFO     | found 0 job(s) in 20 queues
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,466 | INFO     | [monitor] control thread has ended
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,683 [wrapper] ==== pilot stdout END ====
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,697 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,710 [wrapper] pilotpid: 6050
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,723 [wrapper] Pilot exit status: 0
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,815 [wrapper] pandaids: 6853254783
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,910 [wrapper] cleanup supervisor_pilot  9243 6051
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,923 [wrapper] Test setup, not cleaning
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,937 [wrapper] apfmon messages muted
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,950 [wrapper] ==== wrapper stdout END ====
2025-10-22 16:30:35 (7412): Guest Log: 2025-10-22 23:30:33,962 [wrapper] ==== wrapper stderr END ====
2025-10-22 16:30:35 (7412): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 16:30:35 (7412): Guest Log:     "exeErrorCode": 0,
2025-10-22 16:30:35 (7412): Guest Log:     "exeErrorDiag": "",
2025-10-22 16:30:35 (7412): Guest Log:     "pilotErrorCode": 0,
2025-10-22 16:30:35 (7412): Guest Log:     "pilotErrorDiag": "",
2025-10-22 16:30:35 (7412): Guest Log:  *** Listing of results directory ***
2025-10-22 16:30:35 (7412): Guest Log: total 220216
2025-10-22 16:30:35 (7412): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 02:24 pilot3.tar.gz
2025-10-22 16:30:35 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 02:34 queuedata.json
2025-10-22 16:30:35 (7412): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 02:35 runpilot2-wrapper.sh
2025-10-22 16:30:35 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Oct 22 14:18 init_data.xml
2025-10-22 16:30:35 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 22 14:18 input.tar.gz
2025-10-22 16:30:35 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 14:18 start_atlas.sh
2025-10-22 16:30:35 (7412): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 14:18 EVNT.46771634._003154.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 16:30:35 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 14:18 pandaJob.out
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas    977650 Oct 22 14:19 agis_schedconf.cvmfs.json
2025-10-22 16:30:35 (7412): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 14:19 pilot3
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas 211860588 Oct 22 23:28 HITS.46771637._079044.pool.root.1
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 22 23:29 memory_monitor_summary.json
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 23:29 agis_ddmendpoints.agis.ALL.json
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas    681921 Oct 22 23:29 log.46771637._079044.job.log.tgz.1
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 23:29 pilot_heartbeat.json
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas      7829 Oct 22 23:30 heartbeat.json
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas       744 Oct 22 23:30 pilotlog.txt
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas   4219419 Oct 22 23:30 log.46771637._079044.job.log.1
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 23:30 output.list
2025-10-22 16:30:35 (7412): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 23:30 runtime_log
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas   4925440 Oct 22 23:30 result.tar.gz
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas       669 Oct 22 23:30 ZJqMDmWsdV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZogMDmBi9fBn.diag
2025-10-22 16:30:35 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      8667 Oct 22 23:30 runtime_log.err
2025-10-22 16:30:35 (7412): Guest Log: Looking for outputfile HITS.46771637._079044.pool.root.1
2025-10-22 16:30:35 (7412): Guest Log: HITS file was successfully produced
2025-10-22 16:30:35 (7412): Guest Log: -rw-------. 1 atlas atlas 211860588 Oct 22 23:28 /home/atlas/RunAtlas/HITS.46771637._079044.pool.root.1
2025-10-22 16:30:38 (7412): Guest Log: Successfully finished the ATLAS job!
2025-10-22 16:30:38 (7412): Guest Log: Copying the results back to the shared directory!
2025-10-22 16:30:38 (7412): Guest Log:  *** Contents of shared directory: ***
2025-10-22 16:30:38 (7412): Guest Log: total 435948
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root 229016031 Oct 22 14:17 ATLAS.root_0
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root 211860588 Oct 22 23:30 HITS.pool.root.1
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root      9204 Oct 22 14:17 init_data.xml
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 22 14:17 input.tar.gz
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root   4925440 Oct 22 23:30 result.tar.gz
2025-10-22 16:30:38 (7412): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 22 14:17 start_atlas.sh
2025-10-22 16:30:38 (7412): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 16:30:39 (7412): VM Completion File Detected.
2025-10-22 16:30:39 (7412): Powering off VM.
2025-10-22 16:30:41 (7412): Successfully stopped VM.
2025-10-22 16:30:41 (7412): Deregistering VM. (boinc_d047612bb09f1d77, slot#6)
2025-10-22 16:30:41 (7412): Removing network bandwidth throttle group from VM.
2025-10-22 16:30:41 (7412): Removing VM from VirtualBox.
2025-10-22 16:30:47 (7412): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN