Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:21 (16393): wrapper (7.7.26015): starting
10:19:21 (16393): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 10:19:21] Arguments: --nthreads 8
[2025-10-22 10:19:21] Threads: 8
[2025-10-22 10:19:21] Checking for CVMFS
[2025-10-22 10:19:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 10:19:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 10:19:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 10:19:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 10:19:22] 2.11.2.0 2466 67381 127780 151998 3 57 11496110 18432000 1833 130560 0 62586867 99.978 2956917 28962 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 10:19:22] CVMFS is ok
[2025-10-22 10:19:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 10:19:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 10:19:22] Further information can be found at the LHC@home message board.
[2025-10-22 10:19:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 10:19:22] Checking for apptainer binary...
[2025-10-22 10:19:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 10:19:22] Running /usr/bin/apptainer --version
[2025-10-22 10:19:22] apptainer version 1.3.2-1.el7
[2025-10-22 10:19:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 10:19:22] c-206-20.aglt2.org
[2025-10-22 10:19:22] apptainer works
[2025-10-22 10:19:22] Set ATHENA_PROC_NUMBER=8
[2025-10-22 10:19:22] Set ATHENA_CORE_NUMBER=8
[2025-10-22 10:19:22] Starting ATLAS job with PandaID=6853307405
[2025-10-22 10:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:13:04 (13254): wrapper (7.7.26015): starting
13:13:04 (13254): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 13:13:04] Arguments: --nthreads 8
[2025-10-22 13:13:04] Threads: 8
[2025-10-22 13:13:04] This job has been restarted, cleaning up previous attempt
[2025-10-22 13:13:04] Checking for CVMFS
[2025-10-22 13:13:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 13:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 13:13:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 13:13:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 13:13:05] 2.11.2.0 2466 67554 126740 152001 2 188 11526435 18432001 1 130560 0 62856009 99.978 2962386 28969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 13:13:05] CVMFS is ok
[2025-10-22 13:13:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 13:13:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 13:13:05] Further information can be found at the LHC@home message board.
[2025-10-22 13:13:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 13:13:05] Checking for apptainer binary...
[2025-10-22 13:13:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 13:13:05] Running /usr/bin/apptainer --version
[2025-10-22 13:13:05] apptainer version 1.3.2-1.el7
[2025-10-22 13:13:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 13:13:06] c-206-20.aglt2.org
[2025-10-22 13:13:06] apptainer works
[2025-10-22 13:13:06] Set ATHENA_PROC_NUMBER=8
[2025-10-22 13:13:06] Set ATHENA_CORE_NUMBER=8
[2025-10-22 13:13:06] Starting ATLAS job with PandaID=6853307405
[2025-10-22 13:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 16:36:51]  *** The last 200 lines of the pilot log: ***
[2025-10-22 16:36:51] 2025-10-22 20:36:18,915 | INFO     | fitting pss+swap vs Time
[2025-10-22 16:36:51] 2025-10-22 20:36:18,915 | INFO     | sum of square deviations: 2480604650.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,916 | INFO     | sum of deviations: 19286178033.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,916 | INFO     | mean x: 1761159294.5
[2025-10-22 16:36:51] 2025-10-22 20:36:18,917 | INFO     | mean y: 2461879.11
[2025-10-22 16:36:51] 2025-10-22 20:36:18,917 | INFO     | -- intersect: -13690180234.658382
[2025-10-22 16:36:51] 2025-10-22 20:36:18,917 | INFO     | intersect: -13690180234.658382
[2025-10-22 16:36:51] 2025-10-22 20:36:18,917 | INFO     | chi2: 2.065073062381216
[2025-10-22 16:36:51] 2025-10-22 20:36:18,918 | INFO     | sum of square deviations: 2299168690.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,919 | INFO     | sum of deviations: 31791184803.999996
[2025-10-22 16:36:51] 2025-10-22 20:36:18,919 | INFO     | mean x: 1761159142.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,919 | INFO     | mean y: 2472165.5487179486
[2025-10-22 16:36:51] 2025-10-22 20:36:18,919 | INFO     | -- intersect: -24349519054.624027
[2025-10-22 16:36:51] 2025-10-22 20:36:18,920 | INFO     | intersect: -24349519054.624027
[2025-10-22 16:36:51] 2025-10-22 20:36:18,920 | INFO     | chi2: 1.2902677470362172
[2025-10-22 16:36:51] 2025-10-22 20:36:18,920 | INFO     | current chi2=1.2902677470362172 (change=37.5195110264805 %)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,920 | INFO     | sum of square deviations: 2126802667.5
[2025-10-22 16:36:51] 2025-10-22 20:36:18,921 | INFO     | sum of deviations: 30906718780.999996
[2025-10-22 16:36:51] 2025-10-22 20:36:18,922 | INFO     | mean x: 1761158989.5
[2025-10-22 16:36:51] 2025-10-22 20:36:18,922 | INFO     | mean y: 2471382.852631579
[2025-10-22 16:36:51] 2025-10-22 20:36:18,922 | INFO     | -- intersect: -25590709615.49997
[2025-10-22 16:36:51] 2025-10-22 20:36:18,922 | INFO     | intersect: -25590709615.49997
[2025-10-22 16:36:51] 2025-10-22 20:36:18,923 | INFO     | chi2: 1.2905823891572676
[2025-10-22 16:36:51] 2025-10-22 20:36:18,923 | INFO     | current chi2=1.2905823891572676 (change=-0.024385800681542356 %)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,923 | INFO     | right removable region: 189
[2025-10-22 16:36:51] 2025-10-22 20:36:18,923 | INFO     | sum of square deviations: 2299168690.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,925 | INFO     | sum of deviations: -9288978984.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,925 | INFO     | mean x: 1761159447.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,925 | INFO     | mean y: 2485654.0615384616
[2025-10-22 16:36:51] 2025-10-22 20:36:18,925 | INFO     | -- intersect: 7117828326.310638
[2025-10-22 16:36:51] 2025-10-22 20:36:18,925 | INFO     | intersect: 7117828326.310638
[2025-10-22 16:36:51] 2025-10-22 20:36:18,926 | INFO     | chi2: 0.8159379465743651
[2025-10-22 16:36:51] 2025-10-22 20:36:18,926 | INFO     | current chi2=0.8159379465743651 (change=60.48866447206886 %)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,926 | INFO     | sum of square deviations: 2126802667.5
[2025-10-22 16:36:51] 2025-10-22 20:36:18,927 | INFO     | sum of deviations: -12535590127.500002
[2025-10-22 16:36:51] 2025-10-22 20:36:18,928 | INFO     | mean x: 1761159599.5
[2025-10-22 16:36:51] 2025-10-22 20:36:18,928 | INFO     | mean y: 2488490.931578947
[2025-10-22 16:36:51] 2025-10-22 20:36:18,928 | INFO     | -- intersect: 10382941377.233057
[2025-10-22 16:36:51] 2025-10-22 20:36:18,928 | INFO     | intersect: 10382941377.233057
[2025-10-22 16:36:51] 2025-10-22 20:36:18,929 | INFO     | chi2: 0.7935286785241181
[2025-10-22 16:36:51] 2025-10-22 20:36:18,929 | INFO     | current chi2=0.7935286785241181 (change=2.7464426852961195 %)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,929 | INFO     | left removable region: 20
[2025-10-22 16:36:51] 2025-10-22 20:36:18,929 | INFO     | sum of square deviations: 1496660620.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,930 | INFO     | sum of deviations: -742762900.9999999
[2025-10-22 16:36:51] 2025-10-22 20:36:18,931 | INFO     | mean x: 1761159569.0
[2025-10-22 16:36:51] 2025-10-22 20:36:18,931 | INFO     | mean y: 2500845.7396449703
[2025-10-22 16:36:51] 2025-10-22 20:36:18,931 | INFO     | -- intersect: 876529314.9288386
[2025-10-22 16:36:51] 2025-10-22 20:36:18,931 | INFO     | intersect: 876529314.9288386
[2025-10-22 16:36:51] 2025-10-22 20:36:18,932 | INFO     | chi2: 0.0012747282791108646
[2025-10-22 16:36:51] 2025-10-22 20:36:18,932 | INFO     | -- intersect: 876529314.9288386
[2025-10-22 16:36:51] 2025-10-22 20:36:18,932 | INFO     | current memory leak: -0.50 B/s (using 169 data points, chi2=0.00)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,933 | INFO     | could have reported an average CPU frequency of 2327 MHz (10 samples)
[2025-10-22 16:36:51] 2025-10-22 20:36:18,933 | INFO     | ..............................
[2025-10-22 16:36:51] 2025-10-22 20:36:18,933 | INFO     | . Timing measurements:
[2025-10-22 16:36:51] 2025-10-22 20:36:18,933 | INFO     | . get job = 0 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,933 | INFO     | . initial setup = 1 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,934 | INFO     | . payload setup = 6 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,934 | INFO     | . stage-in = 0 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,934 | INFO     | . payload execution = 12149 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,934 | INFO     | . stage-out = 1 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,934 | INFO     | . log creation = 0 s
[2025-10-22 16:36:51] 2025-10-22 20:36:18,935 | INFO     | ..............................
[2025-10-22 16:36:51] 2025-10-22 20:36:19,019 | INFO     | 
[2025-10-22 16:36:51] 2025-10-22 20:36:19,020 | INFO     | job summary report
[2025-10-22 16:36:51] 2025-10-22 20:36:19,020 | INFO     | --------------------------------------------------
[2025-10-22 16:36:51] 2025-10-22 20:36:19,020 | INFO     | PanDA job id: 6853307405
[2025-10-22 16:36:51] 2025-10-22 20:36:19,021 | INFO     | task id: 46771637
[2025-10-22 16:36:51] 2025-10-22 20:36:19,021 | INFO     | errors: (none)
[2025-10-22 16:36:51] 2025-10-22 20:36:19,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 16:36:51] 2025-10-22 20:36:19,021 | INFO     | pilot state: finished 
[2025-10-22 16:36:51] 2025-10-22 20:36:19,022 | INFO     | transexitcode: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:19,022 | INFO     | exeerrorcode: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:19,022 | INFO     | exeerrordiag: 
[2025-10-22 16:36:51] 2025-10-22 20:36:19,022 | INFO     | exitcode: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:19,023 | INFO     | exitmsg: OK
[2025-10-22 16:36:51] 2025-10-22 20:36:19,023 | INFO     | cpuconsumptiontime: 92313 s
[2025-10-22 16:36:51] 2025-10-22 20:36:19,023 | INFO     | nevents: 400
[2025-10-22 16:36:51] 2025-10-22 20:36:19,023 | INFO     | neventsw: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:19,023 | INFO     | pid: 13248
[2025-10-22 16:36:51] 2025-10-22 20:36:19,024 | INFO     | pgrp: 13248
[2025-10-22 16:36:51] 2025-10-22 20:36:19,024 | INFO     | corecount: 8
[2025-10-22 16:36:51] 2025-10-22 20:36:19,024 | INFO     | event service: False
[2025-10-22 16:36:51] 2025-10-22 20:36:19,024 | INFO     | sizes: {0: 2348931, 4: 2349193, 11: 2349221, 12159: 2378827, 12161: 2387881, 12165: 2388019}
[2025-10-22 16:36:51] 2025-10-22 20:36:19,025 | INFO     | --------------------------------------------------
[2025-10-22 16:36:51] 2025-10-22 20:36:19,025 | INFO     | 
[2025-10-22 16:36:51] 2025-10-22 20:36:19,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-22 16:36:51] 2025-10-22 20:36:19,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 16:36:51] 2025-10-22 20:36:19,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 16:36:51] 2025-10-22 20:36:19,045 | INFO     | job 6853307405 has completed (purged errors)
[2025-10-22 16:36:51] 2025-10-22 20:36:19,046 | INFO     | overall cleanup function is called
[2025-10-22 16:36:51] 2025-10-22 20:36:19,106 | INFO     | number of running child processes to parent process 13248: 1
[2025-10-22 16:36:51] 2025-10-22 20:36:19,106 | INFO     | maximum number of monitored processes: 6
[2025-10-22 16:36:51] 2025-10-22 20:36:19,106 | INFO     | aborting job monitoring since job object (job id=6853307405) has expired
[2025-10-22 16:36:51] 2025-10-22 20:36:20,054 | INFO     | --- collectZombieJob: --- 10, [13248]
[2025-10-22 16:36:51] 2025-10-22 20:36:20,054 | INFO     | zombie collector waiting for pid 13248
[2025-10-22 16:36:51] 2025-10-22 20:36:20,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 16:36:51] 2025-10-22 20:36:20,054 | INFO     | collected zombie processes
[2025-10-22 16:36:51] 2025-10-22 20:36:20,055 | INFO     | will attempt to kill all subprocesses of pid=13248
[2025-10-22 16:36:51] 2025-10-22 20:36:20,158 | INFO     | process IDs to be killed: [13248] (in reverse order)
[2025-10-22 16:36:51] 2025-10-22 20:36:20,195 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 16:36:51] 2025-10-22 20:36:20,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 16:36:51] 2025-10-22 20:36:20,198 | INFO     | did not find any defunct processes belonging to 13248
[2025-10-22 16:36:51] 2025-10-22 20:36:20,200 | INFO     | did not find any defunct processes belonging to 13248
[2025-10-22 16:36:51] 2025-10-22 20:36:20,200 | INFO     | ready for new job
[2025-10-22 16:36:51] 2025-10-22 20:36:20,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 16:36:51] 2025-10-22 20:36:20,202 | INFO     | ***************************************
[2025-10-22 16:36:51] 2025-10-22 20:36:20,202 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 16:36:51] 2025-10-22 20:36:20,202 | INFO     | ***************************************
[2025-10-22 16:36:51] 2025-10-22 20:36:20,202 | INFO     | 
[2025-10-22 16:36:51] 2025-10-22 20:36:20,203 | INFO     | architecture information:
[2025-10-22 16:36:51] 2025-10-22 20:36:20,204 | INFO     | executing command: cat /etc/os-release
[2025-10-22 16:36:51] 2025-10-22 20:36:20,214 | INFO     | cat /etc/os-release:
[2025-10-22 16:36:51] NAME="CentOS Linux"
[2025-10-22 16:36:51] VERSION="7 (Core)"
[2025-10-22 16:36:51] ID="centos"
[2025-10-22 16:36:51] ID_LIKE="rhel fedora"
[2025-10-22 16:36:51] VERSION_ID="7"
[2025-10-22 16:36:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 16:36:51] ANSI_COLOR="0;31"
[2025-10-22 16:36:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 16:36:51] HOME_URL="https://www.centos.org/"
[2025-10-22 16:36:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 16:36:51] 
[2025-10-22 16:36:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 16:36:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 16:36:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 16:36:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 16:36:51] 
[2025-10-22 16:36:51] 2025-10-22 20:36:20,214 | INFO     | ***************************************
[2025-10-22 16:36:51] 2025-10-22 20:36:20,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | INFO     | sufficient remaining disk space (27648851968 B)
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | INFO     | update_server=False
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 16:36:51] 2025-10-22 20:36:20,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 16:36:51] 2025-10-22 20:36:20,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 16:36:51] 2025-10-22 20:36:20,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 16:36:51] 2025-10-22 20:36:20,729 | INFO     | aborting loop
[2025-10-22 16:36:51] 2025-10-22 20:36:21,076 | INFO     | all data control threads have been joined
[2025-10-22 16:36:51] 2025-10-22 20:36:21,122 | INFO     | all payload control threads have been joined
[2025-10-22 16:36:51] 2025-10-22 20:36:21,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 16:36:51] 2025-10-22 20:36:21,733 | INFO     | [job] retrieve thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:21,734 | INFO     | [job] job monitor thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:21,734 | INFO     | [job] queue monitor thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:21,987 | INFO     | [data] copytool_in thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,081 | INFO     | [data] control thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,109 | INFO     | all job control threads have been joined
[2025-10-22 16:36:51] 2025-10-22 20:36:22,124 | INFO     | [payload] control thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,206 | INFO     | [job] validate thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,302 | INFO     | [payload] failed_post thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,520 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,734 | INFO     | [data] copytool_out thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:22,768 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:23,088 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:23,116 | INFO     | [job] control thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:23,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:23,231 | INFO     | [payload] validate_post thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:25,398 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 16:36:51] 2025-10-22 20:36:38,004 | INFO     | [monitor] cgroup control has ended
[2025-10-22 16:36:51] 2025-10-22 20:36:38,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912007546688)>', '<ExcThread(monitor, started 139910832973568)>']
[2025-10-22 16:36:51] 2025-10-22 20:36:43,781 | INFO     | all workflow threads have been joined
[2025-10-22 16:36:51] 2025-10-22 20:36:43,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 16:36:51] 2025-10-22 20:36:43,782 | INFO     | traces error code: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:43,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 16:36:51] 2025-10-22 20:36:51,389 | INFO     | PID=25152 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 16:36:51] 2025-10-22 20:36:51,389 | INFO     | .. there are 3 such processes running
[2025-10-22 16:36:51] 2025-10-22 20:36:51,390 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 16:36:51] 2025-10-22 20:36:51,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 16:36:51] 2025-10-22 20:36:51,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 16:36:51] 2025-10-22 20:36:51,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 16:36:51] 2025-10-22 20:36:51,391 | INFO     | [monitor] control thread has ended
[2025-10-22 16:36:51] 2025-10-22 20:36:51,493 [wrapper] ==== pilot stdout END ====
[2025-10-22 16:36:51] 2025-10-22 20:36:51,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 16:36:51] 2025-10-22 20:36:51,499 [wrapper] pilotpid: 25152
[2025-10-22 16:36:51] 2025-10-22 20:36:51,502 [wrapper] Pilot exit status: 0
[2025-10-22 16:36:51] 2025-10-22 20:36:51,511 [wrapper] pandaids: 6853307405 6853307405
[2025-10-22 16:36:51] 2025-10-22 20:36:51,541 [wrapper] cleanup supervisor_pilot 10805 25154
[2025-10-22 16:36:51] 2025-10-22 20:36:51,543 [wrapper] Test setup, not cleaning
[2025-10-22 16:36:51] 2025-10-22 20:36:51,546 [wrapper] apfmon messages muted
[2025-10-22 16:36:51] 2025-10-22 20:36:51,548 [wrapper] ==== wrapper stdout END ====
[2025-10-22 16:36:51] 2025-10-22 20:36:51,550 [wrapper] ==== wrapper stderr END ====
[2025-10-22 16:36:51]  *** Error codes and diagnostics ***
[2025-10-22 16:36:51]     "exeErrorCode": 0,
[2025-10-22 16:36:51]     "exeErrorDiag": "",
[2025-10-22 16:36:51]     "pilotErrorCode": 0,
[2025-10-22 16:36:51]     "pilotErrorDiag": "",
[2025-10-22 16:36:51]  *** Listing of results directory ***
[2025-10-22 16:36:51] total 656928
[2025-10-22 16:36:51] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas    557409 Oct 22 01:29 pilot3.tar.gz
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas      5112 Oct 22 02:13 queuedata.json
[2025-10-22 16:36:51] -rwx------ 1 boincer umatlas     36292 Oct 22 02:16 runpilot2-wrapper.sh
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas       100 Oct 22 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 16:36:51] -rwxr-xr-x 1 boincer umatlas      7986 Oct 22 10:19 run_atlas
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas       105 Oct 22 10:19 job.xml
[2025-10-22 16:36:51] -rw-r--r-- 3 boincer umatlas 229105521 Oct 22 10:19 EVNT.46771634._003280.pool.root.1
[2025-10-22 16:36:51] -rw-r--r-- 3 boincer umatlas 229105521 Oct 22 10:19 ATLAS.root_0
[2025-10-22 16:36:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 10:19 start_atlas.sh
[2025-10-22 16:36:51] drwxrwx--x 2 boincer umatlas      4096 Oct 22 10:19 shared
[2025-10-22 16:36:51] -rw-r--r-- 2 boincer umatlas    569680 Oct 22 10:19 input.tar.gz
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas         0 Oct 22 10:19 boinc_lockfile
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas      2560 Oct 22 13:13 pandaJob.out
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas    978039 Oct 22 13:13 agis_schedconf.cvmfs.json
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas      5953 Oct 22 16:29 init_data.xml
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas 206336228 Oct 22 16:35 HITS.46771637._082186.pool.root.1
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas       532 Oct 22 16:35 boinc_task_state.xml
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas      1050 Oct 22 16:36 memory_monitor_summary.json
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas   1560740 Oct 22 16:36 agis_ddmendpoints.agis.ALL.json
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas    423355 Oct 22 16:36 log.46771637._082186.job.log.tgz.1
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas      7850 Oct 22 16:36 heartbeat.json
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas      8192 Oct 22 16:36 boinc_mmap_file
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas        29 Oct 22 16:36 wrapper_checkpoint.txt
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas        96 Oct 22 16:36 pilot_heartbeat.json
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas       820 Oct 22 16:36 pilotlog.txt
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas   1702427 Oct 22 16:36 log.46771637._082186.job.log.1
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas       357 Oct 22 16:36 output.list
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas       620 Oct 22 16:36 runtime_log
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas   2140160 Oct 22 16:36 result.tar.gz
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas      8789 Oct 22 16:36 runtime_log.err
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas       786 Oct 22 16:36 lVCODmOKhV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3v4NDmNwljlm.diag
[2025-10-22 16:36:51] -rw-r--r-- 1 boincer umatlas     23050 Oct 22 16:36 stderr.txt
[2025-10-22 16:36:51] HITS file was successfully produced:
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas 206336228 Oct 22 16:35 shared/HITS.pool.root.1
[2025-10-22 16:36:51]  *** Contents of shared directory: ***
[2025-10-22 16:36:51] total 427912
[2025-10-22 16:36:51] -rw-r--r-- 3 boincer umatlas 229105521 Oct 22 10:19 ATLAS.root_0
[2025-10-22 16:36:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 10:19 start_atlas.sh
[2025-10-22 16:36:51] -rw-r--r-- 2 boincer umatlas    569680 Oct 22 10:19 input.tar.gz
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas 206336228 Oct 22 16:35 HITS.pool.root.1
[2025-10-22 16:36:51] -rw------- 1 boincer umatlas   2140160 Oct 22 16:36 result.tar.gz
16:36:53 (13254): run_atlas exited; CPU time 92472.329399
16:36:53 (13254): called boinc_finish(0)

</stderr_txt>
]]>

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