Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:07 (3473071): wrapper (7.7.26015): starting
07:08:07 (3473071): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 07:08:07] Arguments: --nthreads 8
[2025-10-22 07:08:07] Threads: 8
[2025-10-22 07:08:07] Checking for CVMFS
[2025-10-22 07:08:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 07:08:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 07:08:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 07:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 07:08:08] 2.11.3.0 1855 44420 210052 151996 0 301 23610852 45568001 13843 130560 0 321414889 99.877 115943962 16732 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-22 07:08:08] CVMFS is ok
[2025-10-22 07:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 07:08:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 07:08:08] Further information can be found at the LHC@home message board.
[2025-10-22 07:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 07:08:08] Checking for apptainer binary...
[2025-10-22 07:08:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 07:08:09] Running /usr/bin/apptainer --version
[2025-10-22 07:08:09] apptainer version 1.4.1-1.el9
[2025-10-22 07:08:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 07:08:09] wns0009.triumf.lcg
[2025-10-22 07:08:09] apptainer works
[2025-10-22 07:08:09] Set ATHENA_PROC_NUMBER=8
[2025-10-22 07:08:09] Set ATHENA_CORE_NUMBER=8
[2025-10-22 07:08:09] Starting ATLAS job with PandaID=6853468191
[2025-10-22 07:08:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 07:12:42]  *** The last 200 lines of the pilot log: ***
[2025-10-22 07:12:42] 2025-10-22 14:11:58,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | WARNING  | wrong length of table data, x=[1761142170.0], y=[2005.0] (must be same and length>=4)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . Timing measurements:
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . get job = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . initial setup = 4 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload setup = 15 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-in = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload execution = 33 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-out = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . log creation = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853468191/pilotlog.txt
[2025-10-22 07:12:42] 2025-10-22 14:11:58,725 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-22 07:12:42] - Log from pilotlog.txt -
[2025-10-22 07:12:42] 2025-10-22 14:11:58,707 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6853468191/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,708 | INFO     | extracted standard info from prmon json
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 07:12:42] 2025-10-22 14:11:58,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | WARNING  | wrong length of table data, x=[1761142170.0], y=[2005.0] (must be same and length>=4)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . Timing measurements:
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . get job = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . initial setup = 4 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload setup = 15 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-in = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload execution = 33 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-out = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . log creation = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853468191/pilotlog.txt
[2025-10-22 07:12:42] 2025-10-22 14:11:58,725 | WARNING  | 
[2025-10-22 07:12:42] [begin log extracts]
[2025-10-22 07:12:42] - Log from pilotlog.txt -
[2025-10-22 07:12:42] 2025-10-22 14:11:58,707 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6853468191/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,708 | INFO     | extracted standard info from prmon json
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 07:12:42] 2025-10-22 14:11:58,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 07:12:42] 2025-10-22 14:11:58,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | WARNING  | wrong length of table data, x=[1761142170.0], y=[2005.0] (must be same and length>=4)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,711 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . Timing measurements:
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . get job = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . initial setup = 4 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload setup = 15 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-in = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . payload execution = 33 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . stage-out = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | . log creation = 0 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,712 | INFO     | ..............................
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 07:12:42] 2025-10-22 14:11:58,713 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853468191/pilotlog.txt
[2025-10-22 07:12:42] [end log extracts]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,725 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,726 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-22 07:12:42] 2025-10-22 14:11:58,804 | INFO     | 
[2025-10-22 07:12:42] 2025-10-22 14:11:58,804 | INFO     | job summary report
[2025-10-22 07:12:42] 2025-10-22 14:11:58,804 | INFO     | --------------------------------------------------
[2025-10-22 07:12:42] 2025-10-22 14:11:58,804 | INFO     | PanDA job id: 6853468191
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | task id: 46771637
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-22 07:09:46,460 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | pilot state: failed 
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | transexitcode: 65
[2025-10-22 07:12:42] 2025-10-22 14:11:58,805 | INFO     | exeerrorcode: 65
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | exitcode: 65
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | cpuconsumptiontime: 19 s
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | nevents: 0
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | neventsw: 0
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | pid: 3490393
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | pgrp: 3490393
[2025-10-22 07:12:42] 2025-10-22 14:11:58,806 | INFO     | corecount: 8
[2025-10-22 07:12:42] 2025-10-22 14:11:58,807 | INFO     | event service: False
[2025-10-22 07:12:42] 2025-10-22 14:11:58,807 | INFO     | sizes: {0: 2348757, 1: 2348956, 10: 2349218, 11: 2349246, 52: 2372524, 53: 2372500, 54: 2377008, 57: 2377036, 177: 2377202}
[2025-10-22 07:12:42] 2025-10-22 14:11:58,807 | INFO     | --------------------------------------------------
[2025-10-22 07:12:42] 2025-10-22 14:11:58,807 | INFO     | 
[2025-10-22 07:12:42] 2025-10-22 14:11:58,807 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-22 07:12:42] 2025-10-22 14:11:58,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 07:12:42] 2025-10-22 14:11:58,827 | INFO     | job 6853468191 has completed (purged errors)
[2025-10-22 07:12:42] 2025-10-22 14:11:58,827 | INFO     | overall cleanup function is called
[2025-10-22 07:12:42] 2025-10-22 14:11:58,870 | INFO     | PID=3479115 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 07:12:42] 2025-10-22 14:11:58,870 | INFO     | .. there are 19 such processes running
[2025-10-22 07:12:42] 2025-10-22 14:11:59,834 | INFO     | --- collectZombieJob: --- 10, [3490393]
[2025-10-22 07:12:42] 2025-10-22 14:11:59,834 | INFO     | zombie collector waiting for pid 3490393
[2025-10-22 07:12:42] 2025-10-22 14:11:59,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 07:12:42] 2025-10-22 14:11:59,834 | INFO     | collected zombie processes
[2025-10-22 07:12:42] 2025-10-22 14:11:59,834 | INFO     | will attempt to kill all subprocesses of pid=3490393
[2025-10-22 07:12:42] 2025-10-22 14:12:00,013 | INFO     | process IDs to be killed: [3490393] (in reverse order)
[2025-10-22 07:12:42] 2025-10-22 14:12:00,068 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 07:12:42] 2025-10-22 14:12:00,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 07:12:42] 2025-10-22 14:12:00,075 | INFO     | did not find any defunct processes belonging to 3490393
[2025-10-22 07:12:42] 2025-10-22 14:12:00,082 | INFO     | did not find any defunct processes belonging to 3490393
[2025-10-22 07:12:42] 2025-10-22 14:12:00,082 | INFO     | ready for new job
[2025-10-22 07:12:42] 2025-10-22 14:12:00,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 07:12:42] 2025-10-22 14:12:00,084 | INFO     | ***************************************
[2025-10-22 07:12:42] 2025-10-22 14:12:00,084 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 07:12:42] 2025-10-22 14:12:00,084 | INFO     | ***************************************
[2025-10-22 07:12:42] 2025-10-22 14:12:00,084 | INFO     | 
[2025-10-22 07:12:42] 2025-10-22 14:12:00,086 | INFO     | architecture information:
[2025-10-22 07:12:42] 2025-10-22 14:12:00,086 | INFO     | executing command: cat /etc/os-release
[2025-10-22 07:12:42] 2025-10-22 14:12:00,097 | INFO     | cat /etc/os-release:
[2025-10-22 07:12:42] NAME="CentOS Linux"
[2025-10-22 07:12:42] VERSION="7 (Core)"
[2025-10-22 07:12:42] ID="centos"
[2025-10-22 07:12:42] ID_LIKE="rhel fedora"
[2025-10-22 07:12:42] VERSION_ID="7"
[2025-10-22 07:12:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 07:12:42] ANSI_COLOR="0;31"
[2025-10-22 07:12:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 07:12:42] HOME_URL="https://www.centos.org/"
[2025-10-22 07:12:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 07:12:42] 
[2025-10-22 07:12:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 07:12:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 07:12:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 07:12:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 07:12:42] 
[2025-10-22 07:12:42] 2025-10-22 14:12:00,097 | INFO     | ***************************************
[2025-10-22 07:12:42] 2025-10-22 14:12:00,599 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-22 07:12:42] 2025-10-22 14:12:00,611 | INFO     | sufficient remaining disk space (1241487769600 B)
[2025-10-22 07:12:42] 2025-10-22 14:12:00,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 07:12:42] 2025-10-22 14:12:00,612 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 07:12:42] 2025-10-22 14:12:00,612 | INFO     | update_server=False
[2025-10-22 07:12:42] 2025-10-22 14:12:00,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 07:12:42] 2025-10-22 14:12:00,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 07:12:42] 2025-10-22 14:12:00,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 07:12:42] 2025-10-22 14:12:00,613 | INFO     | aborting loop
[2025-10-22 07:12:42] 2025-10-22 14:12:01,031 | INFO     | all data control threads have been joined
[2025-10-22 07:12:42] 2025-10-22 14:12:01,183 | INFO     | all job control threads have been joined
[2025-10-22 07:12:42] 2025-10-22 14:12:01,386 | INFO     | all payload control threads have been joined
[2025-10-22 07:12:42] 2025-10-22 14:12:01,617 | INFO     | [job] queue monitor thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:01,617 | INFO     | [job] retrieve thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:01,618 | INFO     | [job] job monitor thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:01,836 | INFO     | [data] copytool_in thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:01,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 07:12:42] 2025-10-22 14:12:02,037 | INFO     | [data] control thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,042 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,142 | INFO     | [job] validate thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,186 | INFO     | [job] control thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,285 | INFO     | [payload] validate_post thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,392 | INFO     | [payload] control thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,392 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 07:12:42] 2025-10-22 14:12:02,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:02,617 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:03,165 | INFO     | [payload] failed_post thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:03,921 | INFO     | [data] copytool_out thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:06,487 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 07:12:42] 2025-10-22 14:12:31,101 | INFO     | PID=3479115 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 07:12:42] 2025-10-22 14:12:31,101 | INFO     | .. there are 18 such processes running
[2025-10-22 07:12:42] 2025-10-22 14:12:31,101 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 07:12:42] 2025-10-22 14:12:31,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 07:12:42] 2025-10-22 14:12:31,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 07:12:42] 2025-10-22 14:12:35,803 | INFO     | [monitor] cgroup control has ended
[2025-10-22 07:12:42] 2025-10-22 14:12:36,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704299579200)>', '<ExcThread(monitor, started 140703749347072)>']
[2025-10-22 07:12:42] 2025-10-22 14:12:37,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 07:12:42] 2025-10-22 14:12:37,127 | INFO     | [monitor] control thread has ended
[2025-10-22 07:12:42] 2025-10-22 14:12:41,834 | INFO     | all workflow threads have been joined
[2025-10-22 07:12:42] 2025-10-22 14:12:41,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 07:12:42] 2025-10-22 14:12:41,835 | INFO     | traces error code: 0
[2025-10-22 07:12:42] 2025-10-22 14:12:41,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 07:12:42] 2025-10-22 14:12:41,965 [wrapper] ==== pilot stdout END ====
[2025-10-22 07:12:42] 2025-10-22 14:12:41,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 07:12:42] 2025-10-22 14:12:41,969 [wrapper] pilotpid: 3479115
[2025-10-22 07:12:42] 2025-10-22 14:12:41,970 [wrapper] Pilot exit status: 0
[2025-10-22 07:12:42] 2025-10-22 14:12:41,978 [wrapper] pandaids: 6853468191
[2025-10-22 07:12:42] 2025-10-22 14:12:42,013 [wrapper] cleanup supervisor_pilot 3479121 3479116
[2025-10-22 07:12:42] 2025-10-22 14:12:42,016 [wrapper] Test setup, not cleaning
[2025-10-22 07:12:42] 2025-10-22 14:12:42,018 [wrapper] apfmon messages muted
[2025-10-22 07:12:42] 2025-10-22 14:12:42,020 [wrapper] ==== wrapper stdout END ====
[2025-10-22 07:12:42] 2025-10-22 14:12:42,022 [wrapper] ==== wrapper stderr END ====
[2025-10-22 07:12:42]  *** Error codes and diagnostics ***
[2025-10-22 07:12:42]     "exeErrorCode": 65,
[2025-10-22 07:12:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 07:12:42]     "pilotErrorCode": 1305,
[2025-10-22 07:12:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 07:12:42]  *** Listing of results directory ***
[2025-10-22 07:12:42] total 224256
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc    557409 Oct 22 04:24 pilot3.tar.gz
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc      5112 Oct 22 04:32 queuedata.json
[2025-10-22 07:12:42] -rwx------. 1 boinc boinc     36292 Oct 22 04:34 runpilot2-wrapper.sh
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc       100 Oct 22 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 07:12:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 07:08 run_atlas
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc       105 Oct 22 07:08 job.xml
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc 225507449 Oct 22 07:08 EVNT.46771634._003480.pool.root.1
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc      6443 Oct 22 07:08 init_data.xml
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc     15120 Oct 22 07:08 start_atlas.sh
[2025-10-22 07:12:42] drwxrwx--x. 2 boinc boinc      4096 Oct 22 07:08 shared
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc    569675 Oct 22 07:08 input.tar.gz
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc         0 Oct 22 07:08 boinc_lockfile
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc      2560 Oct 22 07:08 pandaJob.out
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc    977605 Oct 22 07:08 agis_schedconf.cvmfs.json
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc   1560740 Oct 22 07:08 agis_ddmendpoints.agis.ALL.json
[2025-10-22 07:12:42] drwx------. 5 boinc boinc      4096 Oct 22 07:08 pilot3
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc       524 Oct 22 07:09 boinc_task_state.xml
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc       951 Oct 22 07:09 memory_monitor_summary.json
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc     21261 Oct 22 07:09 log.46771637._086165.job.log.tgz.1
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc        95 Oct 22 07:11 pilot_heartbeat.json
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc      8383 Oct 22 07:11 heartbeat.json
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc      8192 Oct 22 07:12 boinc_mmap_file
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc        23 Oct 22 07:12 wrapper_checkpoint.txt
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc      4823 Oct 22 07:12 pilotlog.txt
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc     87976 Oct 22 07:12 log.46771637._086165.job.log.1
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc       188 Oct 22 07:12 output.list
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc       620 Oct 22 07:12 runtime_log
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc    133120 Oct 22 07:12 result.tar.gz
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc      8526 Oct 22 07:12 runtime_log.err
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc       647 Oct 22 07:12 51GODmXHmV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGa5NDmAFXCEo.diag
[2025-10-22 07:12:42] -rw-r--r--. 1 boinc boinc     21918 Oct 22 07:12 stderr.txt
[2025-10-22 07:12:42] No HITS result produced
[2025-10-22 07:12:42]  *** Contents of shared directory: ***
[2025-10-22 07:12:42] total 220936
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc 225507449 Oct 22 07:08 ATLAS.root_0
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc     15120 Oct 22 07:08 start_atlas.sh
[2025-10-22 07:12:42] -rw-r--r--. 2 boinc boinc    569675 Oct 22 07:08 input.tar.gz
[2025-10-22 07:12:42] -rw-------. 1 boinc boinc    133120 Oct 22 07:12 result.tar.gz
07:12:43 (3473071): run_atlas exited; CPU time 27.177941
07:12:43 (3473071): called boinc_finish(0)

</stderr_txt>
]]>

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