Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:44:10 (6198): wrapper (7.7.26015): starting
09:44:10 (6198): wrapper: running run_atlas (--nthreads 12)
[2025-10-22 09:44:10] Arguments: --nthreads 12
[2025-10-22 09:44:10] Threads: 12
[2025-10-22 09:44:10] Checking for CVMFS
[2025-10-22 09:44:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 09:44:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 09:44:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 09:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 09:44:10] 2.11.2.0 3009 22624 96952 151996 1 57 17932434 20275200 1 130560 0 17785448 99.991 765506 45652 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 09:44:10] CVMFS is ok
[2025-10-22 09:44:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 09:44:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 09:44:10] Further information can be found at the LHC@home message board.
[2025-10-22 09:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 09:44:10] Checking for apptainer binary...
[2025-10-22 09:44:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 09:44:10] Running /usr/bin/apptainer --version
[2025-10-22 09:44:10] apptainer version 1.3.2-1.el7
[2025-10-22 09:44:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 09:44:11] c-115-42.aglt2.org
[2025-10-22 09:44:11] apptainer works
[2025-10-22 09:44:11] Set ATHENA_PROC_NUMBER=12
[2025-10-22 09:44:11] Set ATHENA_CORE_NUMBER=12
[2025-10-22 09:44:11] Starting ATLAS job with PandaID=6853277270
[2025-10-22 09:44:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 10:59:40]  *** The last 200 lines of the pilot log: ***
[2025-10-22 10:59:40] 2025-10-22 14:58:22,561 | INFO     | transferring file log.46771637._080340.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6853277270/log.46771637._080340.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-22 10:59:40] 2025-10-22 14:58:22,561 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6853277270/log.46771637._080340.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._080340.job
[2025-10-22 10:59:40] 2025-10-22 14:58:22,582 | INFO     | adding to output.list: log.46771637._080340.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/7b/log.46771637._080340.job.log.tg
[2025-10-22 10:59:40] 2025-10-22 14:58:22,583 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 10:59:40] 2025-10-22 14:58:22,583 | INFO     | summary of transferred files:
[2025-10-22 10:59:40] 2025-10-22 14:58:22,583 | INFO     |  -- lfn=log.46771637._080340.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 10:59:40] 2025-10-22 14:58:22,583 | INFO     | stage-out finished correctly
[2025-10-22 10:59:40] 2025-10-22 14:58:23,164 | INFO     | PID=9933 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-22 10:59:40] 2025-10-22 14:58:24,151 | INFO     | monitor loop #333: job 0:6853277270 is in state 'finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:24,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 10:59:40] 2025-10-22 14:58:24,165 | INFO     | time since job start (4438s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:26,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 10:59:40] 2025-10-22 14:58:26,170 | INFO     | time since job start (4440s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:26,655 | INFO     | monitor loop #334: job 0:6853277270 is in state 'finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:26,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 10:59:40] 2025-10-22 14:58:28,176 | INFO     | time since job start (4442s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:28,819 | INFO     | job 6853277270 has state=finished
[2025-10-22 10:59:40] 2025-10-22 14:58:28,819 | INFO     | preparing for final server update for job 6853277270 in state='finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:28,820 | INFO     | this job has now completed (state=finished)
[2025-10-22 10:59:40] 2025-10-22 14:58:28,820 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 10:59:40] 2025-10-22 14:58:28,820 | INFO     | log transfer has been attempted: DONE
[2025-10-22 10:59:40] 2025-10-22 14:58:28,820 | INFO     | job 6853277270 has finished - writing final server update
[2025-10-22 10:59:40] 2025-10-22 14:58:28,821 | INFO     | total number of processed events: 400 (read)
[2025-10-22 10:59:40] 2025-10-22 14:58:28,822 | INFO     | executing command: lscpu
[2025-10-22 10:59:40] 2025-10-22 14:58:28,848 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 10:59:40] 2025-10-22 14:58:29,164 | INFO     | monitor loop #335: job 0:6853277270 is in state 'finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:29,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 10:59:40] 2025-10-22 14:58:30,182 | INFO     | time since job start (4444s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:31,668 | INFO     | monitor loop #336: job 0:6853277270 is in state 'finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:31,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 10:59:40] 2025-10-22 14:58:32,187 | INFO     | time since job start (4446s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,176 | INFO     | monitor loop #337: job 0:6853277270 is in state 'finished'
[2025-10-22 10:59:40] 2025-10-22 14:58:34,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,192 | INFO     | time since job start (4448s) is within the limit (172800.0s)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,481 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-22 10:59:40] 2025-10-22 14:58:34,485 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-22 10:59:40] 2025-10-22 14:58:34,487 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6853277270/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,487 | INFO     | extracted standard info from prmon json
[2025-10-22 10:59:40] 2025-10-22 14:58:34,487 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 10:59:40] 2025-10-22 14:58:34,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 10:59:40] 2025-10-22 14:58:34,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 10:59:40] 2025-10-22 14:58:34,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 10:59:40] 2025-10-22 14:58:34,489 | INFO     | fitting pss+swap vs Time
[2025-10-22 10:59:40] 2025-10-22 14:58:34,489 | INFO     | sum of square deviations: 89127252.5
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | sum of deviations: -6402998284.999999
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | mean x: 1761142981.5
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | mean y: 2792673.878787879
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | -- intersect: 126525210608.66573
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | intersect: 126525210608.66573
[2025-10-22 10:59:40] 2025-10-22 14:58:34,490 | INFO     | chi2: 0.05817066942004898
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | -- intersect: 126525210608.66573
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | current memory leak: -71.84 B/s (using 66 data points, chi2=0.06)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | could have reported an average CPU frequency of 2200 MHz (6 samples)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | ..............................
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | . Timing measurements:
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | . get job = 0 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | . initial setup = 2 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,491 | INFO     | . payload setup = 6 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,492 | INFO     | . stage-in = 0 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,492 | INFO     | . payload execution = 4408 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,492 | INFO     | . stage-out = 0 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,492 | INFO     | . log creation = 0 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,492 | INFO     | ..............................
[2025-10-22 10:59:40] 2025-10-22 14:58:34,566 | INFO     | 
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | job summary report
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | --------------------------------------------------
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | PanDA job id: 6853277270
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | task id: 46771637
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | errors: (none)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | pilot state: finished 
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | transexitcode: 0
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | exeerrorcode: 0
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | exeerrordiag: 
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | exitcode: 0
[2025-10-22 10:59:40] 2025-10-22 14:58:34,568 | INFO     | exitmsg: OK
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | cpuconsumptiontime: 48053 s
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | nevents: 400
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | neventsw: 0
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | pid: 16389
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | pgrp: 16389
[2025-10-22 10:59:40] 2025-10-22 14:58:34,569 | INFO     | corecount: 12
[2025-10-22 10:59:40] 2025-10-22 14:58:34,570 | INFO     | event service: False
[2025-10-22 10:59:40] 2025-10-22 14:58:34,570 | INFO     | sizes: {0: 2348931, 5: 2349193, 11: 2349249, 4418: 2375327, 4419: 2375326, 4420: 2384380, 4423: 2384564, 4432: 2384758}
[2025-10-22 10:59:40] 2025-10-22 14:58:34,570 | INFO     | --------------------------------------------------
[2025-10-22 10:59:40] 2025-10-22 14:58:34,570 | INFO     | 
[2025-10-22 10:59:40] 2025-10-22 14:58:34,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-22 10:59:40] 2025-10-22 14:58:34,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 10:59:40] 2025-10-22 14:58:34,599 | INFO     | job 6853277270 has completed (purged errors)
[2025-10-22 10:59:40] 2025-10-22 14:58:34,599 | INFO     | overall cleanup function is called
[2025-10-22 10:59:40] 2025-10-22 14:58:35,604 | INFO     | --- collectZombieJob: --- 10, [16389]
[2025-10-22 10:59:40] 2025-10-22 14:58:35,605 | INFO     | zombie collector waiting for pid 16389
[2025-10-22 10:59:40] 2025-10-22 14:58:35,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 10:59:40] 2025-10-22 14:58:35,605 | INFO     | collected zombie processes
[2025-10-22 10:59:40] 2025-10-22 14:58:35,605 | INFO     | will attempt to kill all subprocesses of pid=16389
[2025-10-22 10:59:40] 2025-10-22 14:58:35,697 | INFO     | process IDs to be killed: [16389] (in reverse order)
[2025-10-22 10:59:40] 2025-10-22 14:58:35,749 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 10:59:40] 2025-10-22 14:58:35,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 10:59:40] 2025-10-22 14:58:35,753 | INFO     | did not find any defunct processes belonging to 16389
[2025-10-22 10:59:40] 2025-10-22 14:58:35,756 | INFO     | did not find any defunct processes belonging to 16389
[2025-10-22 10:59:40] 2025-10-22 14:58:35,756 | INFO     | ready for new job
[2025-10-22 10:59:40] 2025-10-22 14:58:35,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 10:59:40] 2025-10-22 14:58:35,757 | INFO     | ***************************************
[2025-10-22 10:59:40] 2025-10-22 14:58:35,757 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 10:59:40] 2025-10-22 14:58:35,757 | INFO     | ***************************************
[2025-10-22 10:59:40] 2025-10-22 14:58:35,757 | INFO     | 
[2025-10-22 10:59:40] 2025-10-22 14:58:35,758 | INFO     | architecture information:
[2025-10-22 10:59:40] 2025-10-22 14:58:35,758 | INFO     | executing command: cat /etc/os-release
[2025-10-22 10:59:40] 2025-10-22 14:58:35,774 | INFO     | cat /etc/os-release:
[2025-10-22 10:59:40] NAME="CentOS Linux"
[2025-10-22 10:59:40] VERSION="7 (Core)"
[2025-10-22 10:59:40] ID="centos"
[2025-10-22 10:59:40] ID_LIKE="rhel fedora"
[2025-10-22 10:59:40] VERSION_ID="7"
[2025-10-22 10:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 10:59:40] ANSI_COLOR="0;31"
[2025-10-22 10:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 10:59:40] HOME_URL="https://www.centos.org/"
[2025-10-22 10:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 10:59:40] 
[2025-10-22 10:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 10:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 10:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 10:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 10:59:40] 
[2025-10-22 10:59:40] 2025-10-22 14:58:35,774 | INFO     | ***************************************
[2025-10-22 10:59:40] 2025-10-22 14:58:36,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-22 10:59:40] 2025-10-22 14:58:36,295 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-10-22 10:59:40] 2025-10-22 14:58:36,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 10:59:40] 2025-10-22 14:58:36,295 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 10:59:40] 2025-10-22 14:58:36,296 | INFO     | update_server=False
[2025-10-22 10:59:40] 2025-10-22 14:58:36,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 10:59:40] 2025-10-22 14:58:36,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 10:59:40] 2025-10-22 14:58:36,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 10:59:40] 2025-10-22 14:58:36,399 | INFO     | all data control threads have been joined
[2025-10-22 10:59:40] 2025-10-22 14:58:36,482 | INFO     | all job control threads have been joined
[2025-10-22 10:59:40] 2025-10-22 14:58:36,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 10:59:40] 2025-10-22 14:58:36,679 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 10:59:40] 2025-10-22 14:58:36,679 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 10:59:40] 2025-10-22 14:58:36,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 10:59:40] 2025-10-22 14:58:36,680 | INFO     | will abort loop
[2025-10-22 10:59:40] 2025-10-22 14:58:36,940 | INFO     | all payload control threads have been joined
[2025-10-22 10:59:40] 2025-10-22 14:58:37,299 | INFO     | [job] retrieve thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,302 | INFO     | [job] queue monitor thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,406 | INFO     | [data] control thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,487 | INFO     | [job] control thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,579 | INFO     | [payload] failed_post thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,681 | INFO     | [job] job monitor thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:37,945 | INFO     | [payload] control thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,096 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,256 | INFO     | [job] validate thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,274 | INFO     | [payload] validate_post thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,302 | INFO     | [data] copytool_out thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,636 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,651 | INFO     | [data] copytool_in thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:38,658 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:58:40,637 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 10:59:40] 2025-10-22 14:59:07,375 | INFO     | PID=9933 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-22 10:59:40] 2025-10-22 14:59:07,375 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 10:59:40] 2025-10-22 14:59:07,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 10:59:40] 2025-10-22 14:59:07,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 10:59:40] 2025-10-22 14:59:23,881 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-22 10:59:40] 2025-10-22 14:59:32,834 | INFO     | [monitor] cgroup control has ended
[2025-10-22 10:59:40] 2025-10-22 14:59:34,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860004390720)>', '<ExcThread(monitor, started 139859259795200)>']
[2025-10-22 10:59:40] 2025-10-22 14:59:35,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 10:59:40] 2025-10-22 14:59:35,518 | INFO     | [monitor] control thread has ended
[2025-10-22 10:59:40] 2025-10-22 14:59:39,791 | INFO     | all workflow threads have been joined
[2025-10-22 10:59:40] 2025-10-22 14:59:39,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 10:59:40] 2025-10-22 14:59:39,791 | INFO     | traces error code: 0
[2025-10-22 10:59:40] 2025-10-22 14:59:39,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 10:59:40] 2025-10-22 14:59:39,872 [wrapper] ==== pilot stdout END ====
[2025-10-22 10:59:40] 2025-10-22 14:59:39,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 10:59:40] 2025-10-22 14:59:39,879 [wrapper] pilotpid: 9933
[2025-10-22 10:59:40] 2025-10-22 14:59:39,883 [wrapper] Pilot exit status: 0
[2025-10-22 10:59:40] 2025-10-22 14:59:39,896 [wrapper] pandaids: 6853277270
[2025-10-22 10:59:40] 2025-10-22 14:59:39,940 [wrapper] cleanup supervisor_pilot 21922 9934
[2025-10-22 10:59:40] 2025-10-22 14:59:39,944 [wrapper] Test setup, not cleaning
[2025-10-22 10:59:40] 2025-10-22 14:59:39,947 [wrapper] apfmon messages muted
[2025-10-22 10:59:40] 2025-10-22 14:59:39,951 [wrapper] ==== wrapper stdout END ====
[2025-10-22 10:59:40] 2025-10-22 14:59:39,954 [wrapper] ==== wrapper stderr END ====
[2025-10-22 10:59:40]  *** Error codes and diagnostics ***
[2025-10-22 10:59:40]     "exeErrorCode": 0,
[2025-10-22 10:59:40]     "exeErrorDiag": "",
[2025-10-22 10:59:40]     "pilotErrorCode": 0,
[2025-10-22 10:59:40]     "pilotErrorDiag": "",
[2025-10-22 10:59:40]  *** Listing of results directory ***
[2025-10-22 10:59:40] total 444200
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 23:25 pilot3.tar.gz
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 22 00:08 queuedata.json
[2025-10-22 10:59:40] -rwx------ 1 boincer umatlas     36292 Oct 22 00:12 runpilot2-wrapper.sh
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas       100 Oct 22 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 10:59:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 22 09:44 run_atlas
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas       105 Oct 22 09:44 job.xml
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas 227759415 Oct 22 09:44 EVNT.46771634._003211.pool.root.1
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas    569677 Oct 22 09:44 input.tar.gz
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 09:44 start_atlas.sh
[2025-10-22 10:59:40] drwxrwx--x 2 boincer umatlas      4096 Oct 22 09:44 shared
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas         0 Oct 22 09:44 boinc_lockfile
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas      2560 Oct 22 09:44 pandaJob.out
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas    977605 Oct 22 09:44 agis_schedconf.cvmfs.json
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas   1560740 Oct 22 09:44 agis_ddmendpoints.agis.ALL.json
[2025-10-22 10:59:40] drwx------ 5 boincer umatlas      4096 Oct 22 09:44 pilot3
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas 221150685 Oct 22 10:57 HITS.46771637._080340.pool.root.1
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas       529 Oct 22 10:57 boinc_task_state.xml
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas      1050 Oct 22 10:58 memory_monitor_summary.json
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas    373903 Oct 22 10:58 log.46771637._080340.job.log.tgz.1
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas        95 Oct 22 10:58 pilot_heartbeat.json
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas      7859 Oct 22 10:58 heartbeat.json
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas      5954 Oct 22 10:58 init_data.xml
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas        27 Oct 22 10:59 wrapper_checkpoint.txt
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 22 10:59 boinc_mmap_file
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas      4931 Oct 22 10:59 pilotlog.txt
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas    648054 Oct 22 10:59 log.46771637._080340.job.log.1
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas       357 Oct 22 10:59 output.list
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas       620 Oct 22 10:59 runtime_log
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas   1044480 Oct 22 10:59 result.tar.gz
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas      8705 Oct 22 10:59 runtime_log.err
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas       659 Oct 22 10:59 2NSMDmgOfV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaugMDmmMd77n.diag
[2025-10-22 10:59:40] -rw-r--r-- 1 boincer umatlas     22546 Oct 22 10:59 stderr.txt
[2025-10-22 10:59:40] HITS file was successfully produced:
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas 221150685 Oct 22 10:57 shared/HITS.pool.root.1
[2025-10-22 10:59:40]  *** Contents of shared directory: ***
[2025-10-22 10:59:40] total 439992
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas 227759415 Oct 22 09:44 ATLAS.root_0
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas    569677 Oct 22 09:44 input.tar.gz
[2025-10-22 10:59:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 09:44 start_atlas.sh
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas 221150685 Oct 22 10:57 HITS.pool.root.1
[2025-10-22 10:59:40] -rw------- 1 boincer umatlas   1044480 Oct 22 10:59 result.tar.gz
10:59:41 (6198): run_atlas exited; CPU time 48051.765446
10:59:41 (6198): called boinc_finish(0)

</stderr_txt>
]]>

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