Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:29 (28795): wrapper (7.7.26015): starting
02:12:29 (28795): wrapper: running run_atlas (--nthreads 8)
[2025-10-23 02:12:29] Arguments: --nthreads 8
[2025-10-23 02:12:29] Threads: 8
[2025-10-23 02:12:29] Checking for CVMFS
[2025-10-23 02:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-23 02:12:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-23 02:12:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-23 02:12:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-23 02:12:31] 2.11.2.0 24970 235500 140724 152014 0 211 19848109 25165824 4358 130560 0 119803243 99.875 68081014 2920 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-23 02:12:31] CVMFS is ok
[2025-10-23 02:12:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-23 02:12:31] Checking for apptainer binary...
[2025-10-23 02:12:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-23 02:12:31] Running /usr/bin/apptainer --version
[2025-10-23 02:12:31] apptainer version 1.3.2-1.el7
[2025-10-23 02:12:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-23 02:12:36] cg-vwn412.simple-grid.lan
[2025-10-23 02:12:36] apptainer works
[2025-10-23 02:12:36] Set ATHENA_PROC_NUMBER=8
[2025-10-23 02:12:36] Set ATHENA_CORE_NUMBER=8
[2025-10-23 02:12:36] Starting ATLAS job with PandaID=6853328574
[2025-10-23 02:12:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 06:53:25]  *** The last 200 lines of the pilot log: ***
[2025-10-23 06:53:25] 2025-10-23 04:52:12,532 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-23 06:53:25] 2025-10-23 04:52:12,533 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-23 06:53:25] 2025-10-23 04:52:12,535 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6853328574/memory_monitor_summary.json (trf name=prmon)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,535 | INFO     | extracted standard info from prmon json
[2025-10-23 06:53:25] 2025-10-23 04:52:12,535 | INFO     | extracted standard memory fields from prmon json
[2025-10-23 06:53:25] 2025-10-23 04:52:12,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-23 06:53:25] 2025-10-23 04:52:12,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-23 06:53:25] 2025-10-23 04:52:12,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-23 06:53:25] 2025-10-23 04:52:12,542 | INFO     | fitting pss+swap vs Time
[2025-10-23 06:53:25] 2025-10-23 04:52:12,542 | INFO     | sum of square deviations: 5705372090.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,553 | INFO     | sum of deviations: 27575553158.499996
[2025-10-23 06:53:25] 2025-10-23 04:52:12,554 | INFO     | mean x: 1761186965.5
[2025-10-23 06:53:25] 2025-10-23 04:52:12,554 | INFO     | mean y: 2488222.382575758
[2025-10-23 06:53:25] 2025-10-23 04:52:12,554 | INFO     | -- intersect: -8509788281.778357
[2025-10-23 06:53:25] 2025-10-23 04:52:12,554 | INFO     | intersect: -8509788281.778357
[2025-10-23 06:53:25] 2025-10-23 04:52:12,555 | INFO     | chi2: 5.34995781934961
[2025-10-23 06:53:25] 2025-10-23 04:52:12,555 | INFO     | sum of square deviations: 5387301010.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,557 | INFO     | sum of deviations: 44444246139.00003
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | mean x: 1761186813.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | mean y: 2496181.301158301
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | -- intersect: -14526972298.079952
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | intersect: -14526972298.079952
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | chi2: 4.621637631318818
[2025-10-23 06:53:25] 2025-10-23 04:52:12,558 | INFO     | current chi2=4.621637631318818 (change=13.613568791077558 %)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,559 | INFO     | right removable region: 258
[2025-10-23 06:53:25] 2025-10-23 04:52:12,559 | INFO     | sum of square deviations: 5387301010.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,561 | INFO     | sum of deviations: -57938438487.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,561 | INFO     | mean x: 1761187118.0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,561 | INFO     | mean y: 2529155.752895753
[2025-10-23 06:53:25] 2025-10-23 04:52:12,562 | INFO     | -- intersect: 18943448052.048206
[2025-10-23 06:53:25] 2025-10-23 04:52:12,562 | INFO     | intersect: 18943448052.048206
[2025-10-23 06:53:25] 2025-10-23 04:52:12,562 | INFO     | chi2: 1.3335434282734409
[2025-10-23 06:53:25] 2025-10-23 04:52:12,562 | INFO     | current chi2=1.3335434282734409 (change=75.07375808739445 %)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,563 | INFO     | sum of square deviations: 5081276667.5
[2025-10-23 06:53:25] 2025-10-23 04:52:12,570 | INFO     | sum of deviations: -75772085892.50002
[2025-10-23 06:53:25] 2025-10-23 04:52:12,570 | INFO     | mean x: 1761187270.5
[2025-10-23 06:53:25] 2025-10-23 04:52:12,571 | INFO     | mean y: 2537968.744094488
[2025-10-23 06:53:25] 2025-10-23 04:52:12,571 | INFO     | -- intersect: 26265393126.119495
[2025-10-23 06:53:25] 2025-10-23 04:52:12,571 | INFO     | intersect: 26265393126.119495
[2025-10-23 06:53:25] 2025-10-23 04:52:12,571 | INFO     | chi2: 1.0159775781699705
[2025-10-23 06:53:25] 2025-10-23 04:52:12,571 | INFO     | current chi2=1.0159775781699705 (change=23.813686406495798 %)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,572 | INFO     | left removable region: 20
[2025-10-23 06:53:25] 2025-10-23 04:52:12,572 | INFO     | sum of square deviations: 4180243959.5
[2025-10-23 06:53:25] 2025-10-23 04:52:12,574 | INFO     | sum of deviations: -48849165939.00001
[2025-10-23 06:53:25] 2025-10-23 04:52:12,574 | INFO     | mean x: 1761187392.5
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | mean y: 2542535.1596638653
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | -- intersect: 20583287587.225384
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | intersect: 20583287587.225384
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | chi2: 0.2095327307612786
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | -- intersect: 20583287587.225384
[2025-10-23 06:53:25] 2025-10-23 04:52:12,575 | INFO     | current memory leak: -11.69 B/s (using 238 data points, chi2=0.21)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,576 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,576 | INFO     | ..............................
[2025-10-23 06:53:25] 2025-10-23 04:52:12,576 | INFO     | . Timing measurements:
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . get job = 0 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . initial setup = 6 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . payload setup = 113 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . stage-in = 0 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . payload execution = 16231 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . stage-out = 3 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | . log creation = 1 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,577 | INFO     | ..............................
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | 
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | job summary report
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | --------------------------------------------------
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | PanDA job id: 6853328574
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | task id: 46771637
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | errors: (none)
[2025-10-23 06:53:25] 2025-10-23 04:52:12,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | pilot state: finished 
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | transexitcode: 0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | exeerrorcode: 0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | exeerrordiag: 
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | exitcode: 0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | exitmsg: OK
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | cpuconsumptiontime: 61570 s
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | nevents: 400
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | neventsw: 0
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | pid: 6761
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | pgrp: 6761
[2025-10-23 06:53:25] 2025-10-23 04:52:12,701 | INFO     | corecount: 8
[2025-10-23 06:53:25] 2025-10-23 04:52:12,702 | INFO     | event service: False
[2025-10-23 06:53:25] 2025-10-23 04:52:12,702 | INFO     | sizes: {0: 2348760, 1: 2348959, 12: 2348959, 23: 2348987, 34: 2349015, 44: 2349043, 55: 2349199, 66: 2349227, 77: 2349255, 87: 2349311, 98: 2349339, 99: 2349909, 1
[2025-10-23 06:53:25] 2025-10-23 04:52:12,702 | INFO     | --------------------------------------------------
[2025-10-23 06:53:25] 2025-10-23 04:52:12,702 | INFO     | 
[2025-10-23 06:53:25] 2025-10-23 04:52:12,702 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-23 06:53:25] 2025-10-23 04:52:13,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 06:53:25] 2025-10-23 04:52:13,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 06:53:25] 2025-10-23 04:52:13,306 | INFO     | job 6853328574 has completed (purged errors)
[2025-10-23 06:53:25] 2025-10-23 04:52:13,306 | INFO     | overall cleanup function is called
[2025-10-23 06:53:25] 2025-10-23 04:52:14,315 | INFO     | --- collectZombieJob: --- 10, [6761]
[2025-10-23 06:53:25] 2025-10-23 04:52:14,315 | INFO     | zombie collector waiting for pid 6761
[2025-10-23 06:53:25] 2025-10-23 04:52:14,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 06:53:25] 2025-10-23 04:52:14,315 | INFO     | collected zombie processes
[2025-10-23 06:53:25] 2025-10-23 04:52:14,315 | INFO     | will attempt to kill all subprocesses of pid=6761
[2025-10-23 06:53:25] 2025-10-23 04:52:14,422 | INFO     | process IDs to be killed: [6761] (in reverse order)
[2025-10-23 06:53:25] 2025-10-23 04:52:15,167 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 06:53:25] 2025-10-23 04:52:15,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 06:53:25] 2025-10-23 04:52:15,171 | INFO     | did not find any defunct processes belonging to 6761
[2025-10-23 06:53:25] 2025-10-23 04:52:15,174 | INFO     | did not find any defunct processes belonging to 6761
[2025-10-23 06:53:25] 2025-10-23 04:52:15,174 | INFO     | ready for new job
[2025-10-23 06:53:25] 2025-10-23 04:52:15,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 06:53:25] 2025-10-23 04:52:15,177 | INFO     | ***************************************
[2025-10-23 06:53:25] 2025-10-23 04:52:15,177 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 06:53:25] 2025-10-23 04:52:15,177 | INFO     | ***************************************
[2025-10-23 06:53:25] 2025-10-23 04:52:15,177 | INFO     | 
[2025-10-23 06:53:25] 2025-10-23 04:52:15,178 | INFO     | pilot is running in a VM
[2025-10-23 06:53:25] 2025-10-23 04:52:15,178 | INFO     | architecture information:
[2025-10-23 06:53:25] 2025-10-23 04:52:15,179 | INFO     | executing command: cat /etc/os-release
[2025-10-23 06:53:25] 2025-10-23 04:52:15,279 | INFO     | cat /etc/os-release:
[2025-10-23 06:53:25] NAME="CentOS Linux"
[2025-10-23 06:53:25] VERSION="7 (Core)"
[2025-10-23 06:53:25] ID="centos"
[2025-10-23 06:53:25] ID_LIKE="rhel fedora"
[2025-10-23 06:53:25] VERSION_ID="7"
[2025-10-23 06:53:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 06:53:25] ANSI_COLOR="0;31"
[2025-10-23 06:53:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 06:53:25] HOME_URL="https://www.centos.org/"
[2025-10-23 06:53:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 06:53:25] 
[2025-10-23 06:53:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 06:53:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 06:53:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 06:53:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 06:53:25] 
[2025-10-23 06:53:25] 2025-10-23 04:52:15,280 | INFO     | ***************************************
[2025-10-23 06:53:25] 2025-10-23 04:52:15,783 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-23 06:53:25] 2025-10-23 04:52:16,061 | INFO     | sufficient remaining disk space (495743664128 B)
[2025-10-23 06:53:25] 2025-10-23 04:52:16,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 06:53:25] 2025-10-23 04:52:16,062 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 06:53:25] 2025-10-23 04:52:16,062 | INFO     | update_server=False
[2025-10-23 06:53:25] 2025-10-23 04:52:16,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 06:53:25] 2025-10-23 04:52:16,122 | INFO     | all data control threads have been joined
[2025-10-23 06:53:25] 2025-10-23 04:52:16,230 | INFO     | all job control threads have been joined
[2025-10-23 06:53:25] 2025-10-23 04:52:16,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 06:53:25] 2025-10-23 04:52:16,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 06:53:25] 2025-10-23 04:52:16,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-23 06:53:25] 2025-10-23 04:52:16,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-23 06:53:25] 2025-10-23 04:52:16,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 06:53:25] 2025-10-23 04:52:16,517 | INFO     | will abort loop
[2025-10-23 06:53:25] 2025-10-23 04:52:17,068 | INFO     | [job] retrieve thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,128 | INFO     | [data] control thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,236 | INFO     | [job] control thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,383 | INFO     | all payload control threads have been joined
[2025-10-23 06:53:25] 2025-10-23 04:52:17,505 | INFO     | [data] copytool_in thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,523 | INFO     | [job] job monitor thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,657 | INFO     | [payload] validate_post thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 06:53:25] 2025-10-23 04:52:17,713 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,812 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:17,913 | INFO     | [job] validate thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:18,233 | INFO     | [payload] failed_post thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:18,352 | INFO     | [data] copytool_out thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:18,389 | INFO     | [payload] control thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:18,454 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:18,718 | INFO     | [job] queue monitor thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:20,390 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 06:53:25] 2025-10-23 04:52:45,282 | INFO     | PID=32565 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 06:53:25] 2025-10-23 04:52:45,282 | INFO     | .. there are 9 such processes running
[2025-10-23 06:53:25] 2025-10-23 04:52:45,284 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 06:53:25] 2025-10-23 04:52:45,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 06:53:25] 2025-10-23 04:52:45,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 06:53:25] 2025-10-23 04:53:14,485 | INFO     | [monitor] cgroup control has ended
[2025-10-23 06:53:25] 2025-10-23 04:53:15,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509523453760)>', '<ExcThread(monitor, started 140508714235648)>']
[2025-10-23 06:53:25] 2025-10-23 04:53:16,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 06:53:25] 2025-10-23 04:53:16,470 | INFO     | [monitor] control thread has ended
[2025-10-23 06:53:25] 2025-10-23 04:53:20,839 | INFO     | all workflow threads have been joined
[2025-10-23 06:53:25] 2025-10-23 04:53:20,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 06:53:25] 2025-10-23 04:53:20,839 | INFO     | traces error code: 0
[2025-10-23 06:53:25] 2025-10-23 04:53:20,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 06:53:25] 2025-10-23 04:53:21,280 [wrapper] ==== pilot stdout END ====
[2025-10-23 06:53:25] 2025-10-23 04:53:21,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 06:53:25] 2025-10-23 04:53:21,477 [wrapper] pilotpid: 32565
[2025-10-23 06:53:25] 2025-10-23 04:53:21,532 [wrapper] Pilot exit status: 0
[2025-10-23 06:53:25] 2025-10-23 04:53:21,955 [wrapper] pandaids: 6853328574
[2025-10-23 06:53:25] 2025-10-23 04:53:23,077 [wrapper] cleanup supervisor_pilot  3603 32566
[2025-10-23 06:53:25] 2025-10-23 04:53:23,192 [wrapper] Test setup, not cleaning
[2025-10-23 06:53:25] 2025-10-23 04:53:23,302 [wrapper] apfmon messages muted
[2025-10-23 06:53:25] 2025-10-23 04:53:23,409 [wrapper] ==== wrapper stdout END ====
[2025-10-23 06:53:25] 2025-10-23 04:53:23,538 [wrapper] ==== wrapper stderr END ====
[2025-10-23 06:53:25]  *** Error codes and diagnostics ***
[2025-10-23 06:53:25]     "exeErrorCode": 0,
[2025-10-23 06:53:25]     "exeErrorDiag": "",
[2025-10-23 06:53:25]     "pilotErrorCode": 0,
[2025-10-23 06:53:25]     "pilotErrorDiag": "",
[2025-10-23 06:53:25]  *** Listing of results directory ***
[2025-10-23 06:53:25] total 436500
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc    557409 Oct 22 09:27 pilot3.tar.gz
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc      5112 Oct 22 09:32 queuedata.json
[2025-10-23 06:53:25] -rwx------. 1 boinc boinc     36292 Oct 22 09:33 runpilot2-wrapper.sh
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc       100 Oct 23 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 06:53:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct 23 02:12 run_atlas
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc       105 Oct 23 02:12 job.xml
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc      6390 Oct 23 02:12 init_data.xml
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc 228661645 Oct 23 02:12 EVNT.46771634._003330.pool.root.1
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc     15120 Oct 23 02:12 start_atlas.sh
[2025-10-23 06:53:25] drwxrwx--x. 2 boinc boinc        68 Oct 23 02:12 shared
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc    569680 Oct 23 02:12 input.tar.gz
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc         0 Oct 23 02:12 boinc_lockfile
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc      2560 Oct 23 02:12 pandaJob.out
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc    978084 Oct 23 02:14 agis_schedconf.cvmfs.json
[2025-10-23 06:53:25] drwx------. 5 boinc boinc      4096 Oct 23 02:14 pilot3
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc 209038678 Oct 23 06:49 HITS.46771637._083195.pool.root.1
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc       531 Oct 23 06:49 boinc_task_state.xml
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc      1017 Oct 23 06:50 memory_monitor_summary.json
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc   1560740 Oct 23 06:50 agis_ddmendpoints.agis.ALL.json
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc    475527 Oct 23 06:50 log.46771637._083195.job.log.tgz.1
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc      7782 Oct 23 06:52 heartbeat.json
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc        95 Oct 23 06:52 pilot_heartbeat.json
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc      8192 Oct 23 06:53 boinc_mmap_file
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc        28 Oct 23 06:53 wrapper_checkpoint.txt
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc      5070 Oct 23 06:53 pilotlog.txt
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc   2214082 Oct 23 06:53 log.46771637._083195.job.log.1
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc       357 Oct 23 06:53 output.list
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc       620 Oct 23 06:53 runtime_log
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc   2713600 Oct 23 06:53 result.tar.gz
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc      8703 Oct 23 06:53 runtime_log.err
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc       657 Oct 23 06:53 gIINDmSWiV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm354NDm6lFcom.diag
[2025-10-23 06:53:25] -rw-r--r--. 1 boinc boinc     20783 Oct 23 06:53 stderr.txt
[2025-10-23 06:53:25] HITS file was successfully produced:
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc 209038678 Oct 23 06:49 shared/HITS.pool.root.1
[2025-10-23 06:53:25]  *** Contents of shared directory: ***
[2025-10-23 06:53:25] total 430672
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc 228661645 Oct 23 02:12 ATLAS.root_0
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc     15120 Oct 23 02:12 start_atlas.sh
[2025-10-23 06:53:25] -rw-r--r--. 2 boinc boinc    569680 Oct 23 02:12 input.tar.gz
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc 209038678 Oct 23 06:49 HITS.pool.root.1
[2025-10-23 06:53:25] -rw-------. 1 boinc boinc   2713600 Oct 23 06:53 result.tar.gz
06:53:27 (28795): run_atlas exited; CPU time 61800.340551
06:53:27 (28795): called boinc_finish(0)

</stderr_txt>
]]>

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