Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:39 (4026100): wrapper (7.7.26015): starting
17:39:39 (4026100): wrapper: running run_atlas (--nthreads 12)
[2025-10-22 17:39:39] Arguments: --nthreads 12
[2025-10-22 17:39:39] Threads: 12
[2025-10-22 17:39:39] Checking for CVMFS
[2025-10-22 17:39:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 17:39:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 17:39:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 17:39:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 17:39:40] 2.13.2.0 3193492 2111 78072 152000 1 56 4019885 4097024 0 130560 0 2360923 99.993 74067 1860 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.185.49.2:3128 1
[2025-10-22 17:39:40] CVMFS is ok
[2025-10-22 17:39:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 17:39:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 17:39:40] Further information can be found at the LHC@home message board.
[2025-10-22 17:39:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 17:39:40] Checking for apptainer binary...
[2025-10-22 17:39:40] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-22 17:39:40] apptainer is not installed, using version from CVMFS
[2025-10-22 17:39:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 17:39:40] pckelar8.cern.ch
[2025-10-22 17:39:40] apptainer works
[2025-10-22 17:39:40] Set ATHENA_PROC_NUMBER=12
[2025-10-22 17:39:40] Set ATHENA_CORE_NUMBER=12
[2025-10-22 17:39:40] Starting ATLAS job with PandaID=6853328122
[2025-10-22 17:39:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 18:56:00]  *** The last 200 lines of the pilot log: ***
[2025-10-22 18:56:00]  protocol_id=None
[2025-10-22 18:56:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-22 18:56:00]  replicas=None
[2025-10-22 18:56:00]  scope=mc23_13p6TeV
[2025-10-22 18:56:00]  status=None
[2025-10-22 18:56:00]  status_code=0
[2025-10-22 18:56:00]  storage_token=
[2025-10-22 18:56:00]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6853328122/log.46771637._082766.job.log.tgz.1
[2025-10-22 18:56:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/31/log.46771637._082766.job.log.tgz.1
[2025-10-22 18:56:00]  workdir=None
[2025-10-22 18:56:00] ]
[2025-10-22 18:56:00] 2025-10-22 16:54:55,491 | INFO     | transferring file log.46771637._082766.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6853328122/log.46771637._082766.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-22 18:56:00] 2025-10-22 16:54:55,491 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6853328122/log.46771637._082766.job.log.tgz.1 /var/lib/boinc/slots/1/log.46771637._082766.job
[2025-10-22 18:56:00] 2025-10-22 16:54:55,505 | INFO     | adding to output.list: log.46771637._082766.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/31/log.46771637._082766.job.log.tg
[2025-10-22 18:56:00] 2025-10-22 16:54:55,506 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 18:56:00] 2025-10-22 16:54:55,506 | INFO     | summary of transferred files:
[2025-10-22 18:56:00] 2025-10-22 16:54:55,506 | INFO     |  -- lfn=log.46771637._082766.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 18:56:00] 2025-10-22 16:54:55,506 | INFO     | stage-out finished correctly
[2025-10-22 18:56:00] 2025-10-22 16:54:56,221 | WARNING  | process 4037131 can no longer be monitored (due to stat problems) - aborting
[2025-10-22 18:56:00] 2025-10-22 16:54:56,221 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6853328122/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 18:56:00] 2025-10-22 16:54:56,291 | INFO     | number of running child processes to parent process 4037131: 1
[2025-10-22 18:56:00] 2025-10-22 16:54:56,292 | INFO     | maximum number of monitored processes: 6
[2025-10-22 18:56:00] 2025-10-22 16:54:56,506 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 18:56:00] 2025-10-22 16:54:56,567 | INFO     | job 6853328122 has state=finished
[2025-10-22 18:56:00] 2025-10-22 16:54:56,567 | INFO     | preparing for final server update for job 6853328122 in state='finished'
[2025-10-22 18:56:00] 2025-10-22 16:54:56,567 | INFO     | this job has now completed (state=finished)
[2025-10-22 18:56:00] 2025-10-22 16:54:56,567 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 18:56:00] 2025-10-22 16:54:56,567 | INFO     | log transfer has been attempted: DONE
[2025-10-22 18:56:00] 2025-10-22 16:54:56,568 | INFO     | job 6853328122 has finished - writing final server update
[2025-10-22 18:56:00] 2025-10-22 16:54:56,568 | INFO     | total number of processed events: 400 (read)
[2025-10-22 18:56:00] 2025-10-22 16:54:56,569 | INFO     | executing command: lscpu
[2025-10-22 18:56:00] 2025-10-22 16:54:56,587 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 18:56:00] 2025-10-22 16:54:56,827 | INFO     | time since job start (4509s) is within the limit (172800.0s)
[2025-10-22 18:56:00] 2025-10-22 16:54:58,794 | INFO     | monitor loop #342: job 0:6853328122 is in state 'finished'
[2025-10-22 18:56:00] 2025-10-22 16:54:58,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 18:56:00] 2025-10-22 16:54:58,832 | INFO     | time since job start (4511s) is within the limit (172800.0s)
[2025-10-22 18:56:00] 2025-10-22 16:55:00,837 | INFO     | time since job start (4513s) is within the limit (172800.0s)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,035 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-22 18:56:00] 2025-10-22 16:55:01,037 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2164.5017500000004
[2025-10-22 18:56:00] 2025-10-22 16:55:01,039 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6853328122/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,039 | INFO     | extracted standard info from prmon json
[2025-10-22 18:56:00] 2025-10-22 16:55:01,039 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 18:56:00] 2025-10-22 16:55:01,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 18:56:00] 2025-10-22 16:55:01,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 18:56:00] 2025-10-22 16:55:01,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 18:56:00] 2025-10-22 16:55:01,041 | INFO     | fitting pss+swap vs Time
[2025-10-22 18:56:00] 2025-10-22 16:55:01,041 | INFO     | sum of square deviations: 93240818.0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | sum of deviations: -12664088975.999998
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | mean x: 1761149929.0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | mean y: 2921092.4776119404
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | -- intersect: 239204591340.93124
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | intersect: 239204591340.93124
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | chi2: 0.0928553818536819
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | -- intersect: 239204591340.93124
[2025-10-22 18:56:00] 2025-10-22 16:55:01,042 | INFO     | current memory leak: -135.82 B/s (using 67 data points, chi2=0.09)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | could have reported an average CPU frequency of 2508 MHz (6 samples)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | ..............................
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . Timing measurements:
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . get job = 0 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . initial setup = 1 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . payload setup = 6 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . stage-in = 0 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,043 | INFO     | . payload execution = 4482 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,044 | INFO     | . stage-out = 0 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,044 | INFO     | . log creation = 0 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,044 | INFO     | ..............................
[2025-10-22 18:56:00] 2025-10-22 16:55:01,545 | INFO     | 
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | job summary report
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | --------------------------------------------------
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | PanDA job id: 6853328122
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | task id: 46771637
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | errors: (none)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | pilot state: finished 
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | transexitcode: 0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | exeerrorcode: 0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | exeerrordiag: 
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | exitcode: 0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,546 | INFO     | exitmsg: OK
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | cpuconsumptiontime: 49546 s
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | nevents: 400
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | neventsw: 0
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | pid: 4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | pgrp: 4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | corecount: 12
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | event service: False
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | sizes: {0: 2348760, 1: 2348959, 4: 2349221, 11: 2349249, 4491: 2375461, 4492: 2375460, 4493: 2384642, 4494: 2384698, 4499: 2384892}
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | --------------------------------------------------
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | 
[2025-10-22 18:56:00] 2025-10-22 16:55:01,547 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-22 18:56:00] 2025-10-22 16:55:01,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | job 6853328122 has completed (purged errors)
[2025-10-22 18:56:00] 2025-10-22 16:55:01,566 | INFO     | overall cleanup function is called
[2025-10-22 18:56:00] 2025-10-22 16:55:02,574 | INFO     | --- collectZombieJob: --- 10, [4037131]
[2025-10-22 18:56:00] 2025-10-22 16:55:02,574 | INFO     | zombie collector waiting for pid 4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:02,574 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 18:56:00] 2025-10-22 16:55:02,574 | INFO     | collected zombie processes
[2025-10-22 18:56:00] 2025-10-22 16:55:02,574 | INFO     | will attempt to kill all subprocesses of pid=4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:02,648 | INFO     | process IDs to be killed: [4037131] (in reverse order)
[2025-10-22 18:56:00] 2025-10-22 16:55:02,683 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 18:56:00] 2025-10-22 16:55:02,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 18:56:00] 2025-10-22 16:55:02,685 | INFO     | did not find any defunct processes belonging to 4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:02,687 | INFO     | did not find any defunct processes belonging to 4037131
[2025-10-22 18:56:00] 2025-10-22 16:55:02,687 | INFO     | ready for new job
[2025-10-22 18:56:00] 2025-10-22 16:55:02,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 18:56:00] 2025-10-22 16:55:02,688 | INFO     | ***************************************
[2025-10-22 18:56:00] 2025-10-22 16:55:02,689 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 18:56:00] 2025-10-22 16:55:02,689 | INFO     | ***************************************
[2025-10-22 18:56:00] 2025-10-22 16:55:02,689 | INFO     | 
[2025-10-22 18:56:00] 2025-10-22 16:55:02,689 | INFO     | architecture information:
[2025-10-22 18:56:00] 2025-10-22 16:55:02,689 | INFO     | executing command: cat /etc/os-release
[2025-10-22 18:56:00] 2025-10-22 16:55:02,700 | INFO     | cat /etc/os-release:
[2025-10-22 18:56:00] NAME="CentOS Linux"
[2025-10-22 18:56:00] VERSION="7 (Core)"
[2025-10-22 18:56:00] ID="centos"
[2025-10-22 18:56:00] ID_LIKE="rhel fedora"
[2025-10-22 18:56:00] VERSION_ID="7"
[2025-10-22 18:56:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 18:56:00] ANSI_COLOR="0;31"
[2025-10-22 18:56:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 18:56:00] HOME_URL="https://www.centos.org/"
[2025-10-22 18:56:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 18:56:00] 
[2025-10-22 18:56:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 18:56:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 18:56:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 18:56:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 18:56:00] 
[2025-10-22 18:56:00] 2025-10-22 16:55:02,700 | INFO     | ***************************************
[2025-10-22 18:56:00] 2025-10-22 16:55:03,203 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | INFO     | sufficient remaining disk space (1715306758144 B)
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | INFO     | update_server=False
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 18:56:00] 2025-10-22 16:55:03,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 18:56:00] 2025-10-22 16:55:03,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 18:56:00] 2025-10-22 16:55:03,217 | INFO     | aborting loop
[2025-10-22 18:56:00] 2025-10-22 16:55:03,253 | INFO     | all data control threads have been joined
[2025-10-22 18:56:00] 2025-10-22 16:55:03,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 18:56:00] 2025-10-22 16:55:03,998 | INFO     | all job control threads have been joined
[2025-10-22 18:56:00] 2025-10-22 16:55:04,222 | INFO     | [job] retrieve thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,222 | INFO     | [job] job monitor thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,259 | INFO     | [data] control thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,304 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,394 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,535 | INFO     | all payload control threads have been joined
[2025-10-22 18:56:00] 2025-10-22 16:55:04,602 | INFO     | [payload] validate_post thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:04,808 | INFO     | [data] copytool_in thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,004 | INFO     | [job] control thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,135 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,541 | INFO     | [payload] control thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,591 | INFO     | [data] copytool_out thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,635 | INFO     | [job] validate thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:05,641 | INFO     | [payload] failed_post thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:06,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 18:56:00] 2025-10-22 16:55:07,126 | INFO     | [job] queue monitor thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:07,222 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 18:56:00] 2025-10-22 16:55:34,016 | INFO     | PID=4029843 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 18:56:00] 2025-10-22 16:55:34,017 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 18:56:00] 2025-10-22 16:55:34,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 18:56:00] 2025-10-22 16:55:34,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 18:56:00] 2025-10-22 16:55:54,493 | INFO     | [monitor] cgroup control has ended
[2025-10-22 18:56:00] 2025-10-22 16:55:55,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992231991104)>', '<ExcThread(monitor, started 139991522973440)>']
[2025-10-22 18:56:00] 2025-10-22 16:55:56,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 18:56:00] 2025-10-22 16:55:56,095 | INFO     | [monitor] control thread has ended
[2025-10-22 18:56:00] 2025-10-22 16:56:00,354 | INFO     | all workflow threads have been joined
[2025-10-22 18:56:00] 2025-10-22 16:56:00,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 18:56:00] 2025-10-22 16:56:00,355 | INFO     | traces error code: 0
[2025-10-22 18:56:00] 2025-10-22 16:56:00,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 18:56:00] 2025-10-22 16:56:00,428 [wrapper] ==== pilot stdout END ====
[2025-10-22 18:56:00] 2025-10-22 16:56:00,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 18:56:00] 2025-10-22 16:56:00,433 [wrapper] pilotpid: 4029843
[2025-10-22 18:56:00] 2025-10-22 16:56:00,436 [wrapper] Pilot exit status: 0
[2025-10-22 18:56:00] 2025-10-22 16:56:00,443 [wrapper] pandaids: 6853328122
[2025-10-22 18:56:00] 2025-10-22 16:56:00,464 [wrapper] cleanup supervisor_pilot 4052039 4029844
[2025-10-22 18:56:00] 2025-10-22 16:56:00,466 [wrapper] Test setup, not cleaning
[2025-10-22 18:56:00] 2025-10-22 16:56:00,469 [wrapper] apfmon messages muted
[2025-10-22 18:56:00] 2025-10-22 16:56:00,471 [wrapper] ==== wrapper stdout END ====
[2025-10-22 18:56:00] 2025-10-22 16:56:00,473 [wrapper] ==== wrapper stderr END ====
[2025-10-22 18:56:00]  *** Error codes and diagnostics ***
[2025-10-22 18:56:00]     "exeErrorCode": 0,
[2025-10-22 18:56:00]     "exeErrorDiag": "",
[2025-10-22 18:56:00]     "pilotErrorCode": 0,
[2025-10-22 18:56:00]     "pilotErrorDiag": "",
[2025-10-22 18:56:00]  *** Listing of results directory ***
[2025-10-22 18:56:00] total 433616
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc    557409 Oct 22 09:01 pilot3.tar.gz
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc      5112 Oct 22 09:03 queuedata.json
[2025-10-22 18:56:00] -rwx------ 1 boinc boinc     36292 Oct 22 09:04 runpilot2-wrapper.sh
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc       100 Oct 22 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 18:56:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 17:39 run_atlas
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc       105 Oct 22 17:39 job.xml
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc      6251 Oct 22 17:39 init_data.xml
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc 226471868 Oct 22 17:39 EVNT.46771634._003308.pool.root.1
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc     15120 Oct 22 17:39 start_atlas.sh
[2025-10-22 18:56:00] drwxrwx--x 2 boinc boinc      4096 Oct 22 17:39 shared
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc    569678 Oct 22 17:39 input.tar.gz
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc         0 Oct 22 17:39 boinc_lockfile
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc      2560 Oct 22 17:39 pandaJob.out
[2025-10-22 18:56:00] -rw------- 1 boinc boinc    978039 Oct 22 17:39 agis_schedconf.cvmfs.json
[2025-10-22 18:56:00] -rw------- 1 boinc boinc   1560740 Oct 22 17:39 agis_ddmendpoints.agis.ALL.json
[2025-10-22 18:56:00] drwx------ 5 boinc boinc      4096 Oct 22 17:39 pilot3
[2025-10-22 18:56:00] -rw------- 1 boinc boinc 211529665 Oct 22 18:54 HITS.46771637._082766.pool.root.1
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc       529 Oct 22 18:54 boinc_task_state.xml
[2025-10-22 18:56:00] -rw------- 1 boinc boinc      1034 Oct 22 18:54 memory_monitor_summary.json
[2025-10-22 18:56:00] -rw------- 1 boinc boinc    398618 Oct 22 18:54 log.46771637._082766.job.log.tgz.1
[2025-10-22 18:56:00] -rw------- 1 boinc boinc      7800 Oct 22 18:55 heartbeat.json
[2025-10-22 18:56:00] -rw------- 1 boinc boinc        95 Oct 22 18:55 pilot_heartbeat.json
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc      8192 Oct 22 18:55 boinc_mmap_file
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc        27 Oct 22 18:55 wrapper_checkpoint.txt
[2025-10-22 18:56:00] -rw------- 1 boinc boinc      4750 Oct 22 18:56 pilotlog.txt
[2025-10-22 18:56:00] -rw------- 1 boinc boinc    662261 Oct 22 18:56 log.46771637._082766.job.log.1
[2025-10-22 18:56:00] -rw------- 1 boinc boinc       357 Oct 22 18:56 output.list
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc       620 Oct 22 18:56 runtime_log
[2025-10-22 18:56:00] -rw------- 1 boinc boinc   1075200 Oct 22 18:56 result.tar.gz
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc      8727 Oct 22 18:56 runtime_log.err
[2025-10-22 18:56:00] -rw------- 1 boinc boinc       656 Oct 22 18:56 mPDNDmO4hV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmD9gMDmSAbfBn.diag
[2025-10-22 18:56:00] -rw-r--r-- 1 boinc boinc     21953 Oct 22 18:56 stderr.txt
[2025-10-22 18:56:00] HITS file was successfully produced:
[2025-10-22 18:56:00] -rw------- 1 boinc boinc 211529665 Oct 22 18:54 shared/HITS.pool.root.1
[2025-10-22 18:56:00]  *** Contents of shared directory: ***
[2025-10-22 18:56:00] total 429372
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc 226471868 Oct 22 17:39 ATLAS.root_0
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc     15120 Oct 22 17:39 start_atlas.sh
[2025-10-22 18:56:00] -rw-r--r-- 2 boinc boinc    569678 Oct 22 17:39 input.tar.gz
[2025-10-22 18:56:00] -rw------- 1 boinc boinc 211529665 Oct 22 18:54 HITS.pool.root.1
[2025-10-22 18:56:00] -rw------- 1 boinc boinc   1075200 Oct 22 18:56 result.tar.gz
18:56:01 (4026100): run_atlas exited; CPU time 49555.986334
18:56:01 (4026100): called boinc_finish(0)

</stderr_txt>
]]>

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