Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:44:29 (3182145): wrapper (7.7.26015): starting
11:44:29 (3182145): wrapper: running run_atlas (--nthreads 10)
[2025-10-22 11:44:30] Arguments: --nthreads 10
[2025-10-22 11:44:30] Threads: 10
[2025-10-22 11:44:30] Checking for CVMFS
[2025-10-22 11:44:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 11:44:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 11:44:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 11:44:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 11:44:30] 2.13.2.0 1448902 143857 750352 152000 1 65 16808185 21551105 11993 16776704 0 113239514 99.473 150706396 28723 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 11:44:30] CVMFS is ok
[2025-10-22 11:44:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 11:44:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 11:44:30] Further information can be found at the LHC@home message board.
[2025-10-22 11:44:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 11:44:30] Checking for apptainer binary...
[2025-10-22 11:44:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 11:44:30] Running /usr/bin/apptainer --version
[2025-10-22 11:44:30] apptainer version 1.4.3-1.el9
[2025-10-22 11:44:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 11:44:30] c-16-30.aglt2.org
[2025-10-22 11:44:30] apptainer works
[2025-10-22 11:44:30] Set ATHENA_PROC_NUMBER=10
[2025-10-22 11:44:30] Set ATHENA_CORE_NUMBER=10
[2025-10-22 11:44:30] Starting ATLAS job with PandaID=6853278573
[2025-10-22 11:44:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:49:18 (452329): wrapper (7.7.26015): starting
16:49:18 (452329): wrapper: running run_atlas (--nthreads 10)
[2025-10-22 16:49:18] Arguments: --nthreads 10
[2025-10-22 16:49:18] Threads: 10
[2025-10-22 16:49:18] This job has been restarted, cleaning up previous attempt
[2025-10-22 16:49:18] Checking for CVMFS
[2025-10-22 16:49:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 16:49:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 16:49:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 16:49:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 16:49:18] 2.13.2.0 1448902 144161 758560 152009 1 334 14668819 21551105 16969 16776704 0 114627275 99.472 152882960 28741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 16:49:18] CVMFS is ok
[2025-10-22 16:49:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 16:49:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 16:49:18] Further information can be found at the LHC@home message board.
[2025-10-22 16:49:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 16:49:18] Checking for apptainer binary...
[2025-10-22 16:49:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 16:49:18] Running /usr/bin/apptainer --version
[2025-10-22 16:49:18] apptainer version 1.4.3-1.el9
[2025-10-22 16:49:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 16:49:18] c-16-30.aglt2.org
[2025-10-22 16:49:18] apptainer works
[2025-10-22 16:49:19] Set ATHENA_PROC_NUMBER=10
[2025-10-22 16:49:19] Set ATHENA_CORE_NUMBER=10
[2025-10-22 16:49:19] Starting ATLAS job with PandaID=6853278573
[2025-10-22 16:49:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 22:41:35]  *** The last 200 lines of the pilot log: ***
[2025-10-22 22:41:35] 2025-10-23 02:41:02,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 22:41:35] 2025-10-23 02:41:02,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 22:41:35] 2025-10-23 02:41:02,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 22:41:35] 2025-10-23 02:41:02,239 | INFO     | fitting pss+swap vs Time
[2025-10-22 22:41:35] 2025-10-23 02:41:02,240 | INFO     | sum of square deviations: 12732859399.98844
[2025-10-22 22:41:35] 2025-10-23 02:41:02,244 | INFO     | sum of deviations: 85599165107.8551
[2025-10-22 22:41:35] 2025-10-23 02:41:02,244 | INFO     | mean x: 1761176693.194203
[2025-10-22 22:41:35] 2025-10-23 02:41:02,244 | INFO     | mean y: 2212206.927536232
[2025-10-22 22:41:35] 2025-10-23 02:41:02,245 | INFO     | -- intersect: -11837646367.570955
[2025-10-22 22:41:35] 2025-10-23 02:41:02,245 | INFO     | intersect: -11837646367.570955
[2025-10-22 22:41:35] 2025-10-23 02:41:02,245 | INFO     | chi2: 1.9004215339473003
[2025-10-22 22:41:35] 2025-10-23 02:41:02,246 | INFO     | sum of square deviations: 12187250999.797056
[2025-10-22 22:41:35] 2025-10-23 02:41:02,249 | INFO     | sum of deviations: 86084881640.55592
[2025-10-22 22:41:35] 2025-10-23 02:41:02,250 | INFO     | mean x: 1761176540.697059
[2025-10-22 22:41:35] 2025-10-23 02:41:02,250 | INFO     | mean y: 2212335.655882353
[2025-10-22 22:41:35] 2025-10-23 02:41:02,250 | INFO     | -- intersect: -12437892004.244452
[2025-10-22 22:41:35] 2025-10-23 02:41:02,250 | INFO     | intersect: -12437892004.244452
[2025-10-22 22:41:35] 2025-10-23 02:41:02,251 | INFO     | chi2: 1.8915989337422976
[2025-10-22 22:41:35] 2025-10-23 02:41:02,251 | INFO     | current chi2=1.8915989337422976 (change=0.46424438196496204 %)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,251 | INFO     | right removable region: 339
[2025-10-22 22:41:35] 2025-10-23 02:41:02,251 | INFO     | sum of square deviations: 12187210129.797058
[2025-10-22 22:41:35] 2025-10-23 02:41:02,255 | INFO     | sum of deviations: 28126911278.87351
[2025-10-22 22:41:35] 2025-10-23 02:41:02,255 | INFO     | mean x: 1761176845.697059
[2025-10-22 22:41:35] 2025-10-23 02:41:02,255 | INFO     | mean y: 2228197.1735294117
[2025-10-22 22:41:35] 2025-10-23 02:41:02,255 | INFO     | -- intersect: -4062398928.948924
[2025-10-22 22:41:35] 2025-10-23 02:41:02,256 | INFO     | intersect: -4062398928.948924
[2025-10-22 22:41:35] 2025-10-23 02:41:02,256 | INFO     | chi2: 0.24709264332082523
[2025-10-22 22:41:35] 2025-10-23 02:41:02,256 | INFO     | current chi2=0.24709264332082523 (change=86.99800865718473 %)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,257 | INFO     | sum of square deviations: 11657375109.600048
[2025-10-22 22:41:35] 2025-10-23 02:41:02,260 | INFO     | sum of deviations: 11857596047.40001
[2025-10-22 22:41:35] 2025-10-23 02:41:02,260 | INFO     | mean x: 1761176998.2
[2025-10-22 22:41:35] 2025-10-23 02:41:02,261 | INFO     | mean y: 2232877.113432836
[2025-10-22 22:41:35] 2025-10-23 02:41:02,261 | INFO     | -- intersect: -1789193170.027347
[2025-10-22 22:41:35] 2025-10-23 02:41:02,261 | INFO     | intersect: -1789193170.027347
[2025-10-22 22:41:35] 2025-10-23 02:41:02,262 | INFO     | chi2: 0.15140860797270253
[2025-10-22 22:41:35] 2025-10-23 02:41:02,262 | INFO     | current chi2=0.15140860797270253 (change=38.723951495345204 %)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,262 | INFO     | sum of square deviations: 11143121776.896927
[2025-10-22 22:41:35] 2025-10-23 02:41:02,265 | INFO     | sum of deviations: 9401784975.678793
[2025-10-22 22:41:35] 2025-10-23 02:41:02,266 | INFO     | mean x: 1761177150.7030303
[2025-10-22 22:41:35] 2025-10-23 02:41:02,266 | INFO     | mean y: 2233591.721212121
[2025-10-22 22:41:35] 2025-10-23 02:41:02,266 | INFO     | -- intersect: -1483724222.1221876
[2025-10-22 22:41:35] 2025-10-23 02:41:02,266 | INFO     | intersect: -1483724222.1221876
[2025-10-22 22:41:35] 2025-10-23 02:41:02,267 | INFO     | chi2: 0.12210066803478177
[2025-10-22 22:41:35] 2025-10-23 02:41:02,267 | INFO     | current chi2=0.12210066803478177 (change=19.3568518529704 %)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,267 | INFO     | left removable region: 30
[2025-10-22 22:41:35] 2025-10-23 02:41:02,268 | INFO     | sum of square deviations: 9148271133.559875
[2025-10-22 22:41:35] 2025-10-23 02:41:02,270 | INFO     | sum of deviations: 18344415432.72168
[2025-10-22 22:41:35] 2025-10-23 02:41:02,271 | INFO     | mean x: 1761177425.2006474
[2025-10-22 22:41:35] 2025-10-23 02:41:02,271 | INFO     | mean y: 2231524.3915857607
[2025-10-22 22:41:35] 2025-10-23 02:41:02,271 | INFO     | -- intersect: -3529339618.0609703
[2025-10-22 22:41:35] 2025-10-23 02:41:02,271 | INFO     | intersect: -3529339618.0609703
[2025-10-22 22:41:35] 2025-10-23 02:41:02,272 | INFO     | chi2: 0.075068080195773
[2025-10-22 22:41:35] 2025-10-23 02:41:02,272 | INFO     | -- intersect: -3529339618.0609703
[2025-10-22 22:41:35] 2025-10-23 02:41:02,272 | INFO     | current memory leak: 2.01 B/s (using 309 data points, chi2=0.08)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | could have reported an average CPU frequency of 2914 MHz (15 samples)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | ..............................
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | . Timing measurements:
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | . get job = 0 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | . initial setup = 2 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,273 | INFO     | . payload setup = 6 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,274 | INFO     | . stage-in = 0 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,274 | INFO     | . payload execution = 21044 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,274 | INFO     | . stage-out = 13 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,274 | INFO     | . log creation = 0 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,274 | INFO     | ..............................
[2025-10-22 22:41:35] 2025-10-23 02:41:02,404 | INFO     | 
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | job summary report
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | --------------------------------------------------
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | PanDA job id: 6853278573
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | task id: 46771637
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | errors: (none)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | pilot state: finished 
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | transexitcode: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | exeerrorcode: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | exeerrordiag: 
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | exitcode: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | exitmsg: OK
[2025-10-22 22:41:35] 2025-10-23 02:41:02,406 | INFO     | cpuconsumptiontime: 83976 s
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | nevents: 400
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | neventsw: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | pid: 473926
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | pgrp: 473926
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | corecount: 10
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | event service: False
[2025-10-22 22:41:35] 2025-10-23 02:41:02,407 | INFO     | sizes: {0: 2348715, 1: 2348970, 2: 2348970, 6: 2349260, 12: 2349288, 21054: 2383351, 21069: 2392427, 21073: 2392565}
[2025-10-22 22:41:35] 2025-10-23 02:41:02,408 | INFO     | --------------------------------------------------
[2025-10-22 22:41:35] 2025-10-23 02:41:02,408 | INFO     | 
[2025-10-22 22:41:35] 2025-10-23 02:41:02,408 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-10-22 22:41:35] 2025-10-23 02:41:02,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 22:41:35] 2025-10-23 02:41:02,432 | INFO     | job 6853278573 has completed (purged errors)
[2025-10-22 22:41:35] 2025-10-23 02:41:02,432 | INFO     | overall cleanup function is called
[2025-10-22 22:41:35] 2025-10-23 02:41:03,440 | INFO     | --- collectZombieJob: --- 10, [473926]
[2025-10-22 22:41:35] 2025-10-23 02:41:03,440 | INFO     | zombie collector waiting for pid 473926
[2025-10-22 22:41:35] 2025-10-23 02:41:03,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 22:41:35] 2025-10-23 02:41:03,441 | INFO     | collected zombie processes
[2025-10-22 22:41:35] 2025-10-23 02:41:03,441 | INFO     | will attempt to kill all subprocesses of pid=473926
[2025-10-22 22:41:35] 2025-10-23 02:41:03,849 | INFO     | process IDs to be killed: [473926] (in reverse order)
[2025-10-22 22:41:35] 2025-10-23 02:41:03,952 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 22:41:35] 2025-10-23 02:41:03,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 22:41:35] 2025-10-23 02:41:03,970 | INFO     | did not find any defunct processes belonging to 473926
[2025-10-22 22:41:35] 2025-10-23 02:41:03,987 | INFO     | did not find any defunct processes belonging to 473926
[2025-10-22 22:41:35] 2025-10-23 02:41:03,987 | INFO     | ready for new job
[2025-10-22 22:41:35] 2025-10-23 02:41:03,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 22:41:35] 2025-10-23 02:41:03,990 | INFO     | ***************************************
[2025-10-22 22:41:35] 2025-10-23 02:41:03,990 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 22:41:35] 2025-10-23 02:41:03,990 | INFO     | ***************************************
[2025-10-22 22:41:35] 2025-10-23 02:41:03,990 | INFO     | 
[2025-10-22 22:41:35] 2025-10-23 02:41:04,004 | INFO     | architecture information:
[2025-10-22 22:41:35] 2025-10-23 02:41:04,005 | INFO     | executing command: cat /etc/os-release
[2025-10-22 22:41:35] 2025-10-23 02:41:04,019 | INFO     | cat /etc/os-release:
[2025-10-22 22:41:35] NAME="CentOS Linux"
[2025-10-22 22:41:35] VERSION="7 (Core)"
[2025-10-22 22:41:35] ID="centos"
[2025-10-22 22:41:35] ID_LIKE="rhel fedora"
[2025-10-22 22:41:35] VERSION_ID="7"
[2025-10-22 22:41:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 22:41:35] ANSI_COLOR="0;31"
[2025-10-22 22:41:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 22:41:35] HOME_URL="https://www.centos.org/"
[2025-10-22 22:41:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 22:41:35] 
[2025-10-22 22:41:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 22:41:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 22:41:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 22:41:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 22:41:35] 
[2025-10-22 22:41:35] 2025-10-23 02:41:04,019 | INFO     | ***************************************
[2025-10-22 22:41:35] 2025-10-23 02:41:04,522 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-10-22 22:41:35] 2025-10-23 02:41:04,540 | INFO     | sufficient remaining disk space (1779153502208 B)
[2025-10-22 22:41:35] 2025-10-23 02:41:04,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 22:41:35] 2025-10-23 02:41:04,540 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 22:41:35] 2025-10-23 02:41:04,540 | INFO     | update_server=False
[2025-10-22 22:41:35] 2025-10-23 02:41:04,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 22:41:35] 2025-10-23 02:41:04,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 22:41:35] 2025-10-23 02:41:04,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 22:41:35] 2025-10-23 02:41:04,541 | INFO     | aborting loop
[2025-10-22 22:41:35] 2025-10-23 02:41:04,719 | INFO     | all data control threads have been joined
[2025-10-22 22:41:35] 2025-10-23 02:41:05,221 | INFO     | all payload control threads have been joined
[2025-10-22 22:41:35] 2025-10-23 02:41:05,431 | INFO     | all job control threads have been joined
[2025-10-22 22:41:35] 2025-10-23 02:41:05,546 | INFO     | [job] retrieve thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,547 | INFO     | [job] job monitor thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,576 | INFO     | [data] copytool_in thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,579 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,656 | INFO     | [job] validate thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,724 | INFO     | [data] control thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:05,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 22:41:35] 2025-10-23 02:41:06,089 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:06,100 | INFO     | [payload] failed_post thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:06,226 | INFO     | [payload] control thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:06,437 | INFO     | [job] control thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:06,669 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:06,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:07,072 | INFO     | [payload] validate_post thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:07,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 22:41:35] 2025-10-23 02:41:07,869 | INFO     | [data] copytool_out thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:08,288 | INFO     | [monitor] cgroup control has ended
[2025-10-22 22:41:35] 2025-10-23 02:41:08,426 | INFO     | [job] queue monitor thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:08,548 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 22:41:35] 2025-10-23 02:41:09,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415743772480)>', '<ExcThread(monitor, started 140415021868800)>']
[2025-10-22 22:41:35] 2025-10-23 02:41:14,422 | INFO     | all workflow threads have been joined
[2025-10-22 22:41:35] 2025-10-23 02:41:14,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 22:41:35] 2025-10-23 02:41:14,423 | INFO     | traces error code: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:14,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 22:41:35] 2025-10-23 02:41:34,765 | INFO     | PID=460512 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 22:41:35] 2025-10-23 02:41:34,766 | INFO     | .. there are 13 such processes running
[2025-10-22 22:41:35] 2025-10-23 02:41:34,767 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 22:41:35] 2025-10-23 02:41:34,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 22:41:35] 2025-10-23 02:41:34,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 22:41:35] 2025-10-23 02:41:34,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 22:41:35] 2025-10-23 02:41:34,767 | INFO     | [monitor] control thread has ended
[2025-10-22 22:41:35] 2025-10-23 02:41:34,918 [wrapper] ==== pilot stdout END ====
[2025-10-22 22:41:35] 2025-10-23 02:41:34,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 22:41:35] 2025-10-23 02:41:34,924 [wrapper] pilotpid: 460512
[2025-10-22 22:41:35] 2025-10-23 02:41:34,927 [wrapper] Pilot exit status: 0
[2025-10-22 22:41:35] 2025-10-23 02:41:34,938 [wrapper] pandaids: 6853278573 6853278573
[2025-10-22 22:41:35] 2025-10-23 02:41:35,009 [wrapper] cleanup supervisor_pilot 1645644 460514
[2025-10-22 22:41:35] 2025-10-23 02:41:35,013 [wrapper] Test setup, not cleaning
[2025-10-22 22:41:35] 2025-10-23 02:41:35,015 [wrapper] apfmon messages muted
[2025-10-22 22:41:35] 2025-10-23 02:41:35,018 [wrapper] ==== wrapper stdout END ====
[2025-10-22 22:41:35] 2025-10-23 02:41:35,021 [wrapper] ==== wrapper stderr END ====
[2025-10-22 22:41:35]  *** Error codes and diagnostics ***
[2025-10-22 22:41:35]     "exeErrorCode": 0,
[2025-10-22 22:41:35]     "exeErrorDiag": "",
[2025-10-22 22:41:35]     "pilotErrorCode": 0,
[2025-10-22 22:41:35]     "pilotErrorDiag": "",
[2025-10-22 22:41:35]  *** Listing of results directory ***
[2025-10-22 22:41:35] total 659004
[2025-10-22 22:41:35] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 22 00:26 pilot3.tar.gz
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 22 00:38 queuedata.json
[2025-10-22 22:41:35] -rwx------. 1 boincer umatlas     36292 Oct 22 00:41 runpilot2-wrapper.sh
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas       100 Oct 22 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 22:41:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 22 11:44 run_atlas
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas       105 Oct 22 11:44 job.xml
[2025-10-22 22:41:35] -rw-r--r--. 3 boincer umatlas 228306781 Oct 22 11:44 EVNT.46771634._003232.pool.root.1
[2025-10-22 22:41:35] -rw-r--r--. 3 boincer umatlas 228306781 Oct 22 11:44 ATLAS.root_0
[2025-10-22 22:41:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 11:44 start_atlas.sh
[2025-10-22 22:41:35] drwxrwx--x. 2 boincer umatlas        68 Oct 22 11:44 shared
[2025-10-22 22:41:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 22 11:44 input.tar.gz
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas         0 Oct 22 11:44 boinc_lockfile
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas      2560 Oct 22 16:49 pandaJob.out
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas    978023 Oct 22 16:49 agis_schedconf.cvmfs.json
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas      6549 Oct 22 22:37 init_data.xml
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas 207531428 Oct 22 22:40 HITS.46771637._080852.pool.root.1
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas       532 Oct 22 22:40 boinc_task_state.xml
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas      1038 Oct 22 22:40 memory_monitor_summary.json
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas   1560740 Oct 22 22:40 agis_ddmendpoints.agis.ALL.json
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas    592563 Oct 22 22:40 log.46771637._080852.job.log.tgz.1
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas      7818 Oct 22 22:41 heartbeat.json
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 22 22:41 boinc_mmap_file
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas        29 Oct 22 22:41 wrapper_checkpoint.txt
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas        96 Oct 22 22:41 pilot_heartbeat.json
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas       822 Oct 22 22:41 pilotlog.txt
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas   2798760 Oct 22 22:41 log.46771637._080852.job.log.1
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas       357 Oct 22 22:41 output.list
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas       620 Oct 22 22:41 runtime_log
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas   3409920 Oct 22 22:41 result.tar.gz
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas       782 Oct 22 22:41 TSbKDmOqfV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZzgMDmrQntSo.diag
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas      8940 Oct 22 22:41 runtime_log.err
[2025-10-22 22:41:35] -rw-r--r--. 1 boincer umatlas     23200 Oct 22 22:41 stderr.txt
[2025-10-22 22:41:35] HITS file was successfully produced:
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas 207531428 Oct 22 22:40 shared/HITS.pool.root.1
[2025-10-22 22:41:35]  *** Contents of shared directory: ***
[2025-10-22 22:41:35] total 429536
[2025-10-22 22:41:35] -rw-r--r--. 3 boincer umatlas 228306781 Oct 22 11:44 ATLAS.root_0
[2025-10-22 22:41:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 11:44 start_atlas.sh
[2025-10-22 22:41:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 22 11:44 input.tar.gz
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas 207531428 Oct 22 22:40 HITS.pool.root.1
[2025-10-22 22:41:35] -rw-------. 1 boincer umatlas   3409920 Oct 22 22:41 result.tar.gz
22:41:36 (452329): run_atlas exited; CPU time 84915.048065
22:41:36 (452329): called boinc_finish(0)

</stderr_txt>
]]>

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