Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:42:54 (28820): wrapper (7.7.26015): starting
20:42:54 (28820): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 20:42:54] Arguments: --nthreads 8
[2025-10-22 20:42:54] Threads: 8
[2025-10-22 20:42:54] Checking for CVMFS
[2025-10-22 20:42:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 20:42:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 20:42:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 20:42:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 20:42:56] 2.11.2.0 23990 122150 132016 152005 3 161 15554948 25165824 4632 130560 0 40245269 99.909 17024026 2248 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-22 20:42:56] CVMFS is ok
[2025-10-22 20:42:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 20:42:56] Checking for apptainer binary...
[2025-10-22 20:42:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 20:42:56] Running /usr/bin/apptainer --version
[2025-10-22 20:42:56] apptainer version 1.3.2-1.el7
[2025-10-22 20:42:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 20:43:13] cg-vwn247.simple-grid.lan
[2025-10-22 20:43:13] apptainer works
[2025-10-22 20:43:13] Set ATHENA_PROC_NUMBER=8
[2025-10-22 20:43:13] Set ATHENA_CORE_NUMBER=8
[2025-10-22 20:43:13] Starting ATLAS job with PandaID=6853277220
[2025-10-22 20:43:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-23 01:35:18]  *** The last 200 lines of the pilot log: ***
[2025-10-23 01:35:18] 2025-10-22 23:34:37,315 | INFO     | fitting pss+swap vs Time
[2025-10-23 01:35:18] 2025-10-22 23:34:37,316 | INFO     | sum of square deviations: 6519285025.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,319 | INFO     | sum of deviations: 97134172036.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,319 | INFO     | mean x: 1761167660.5
[2025-10-23 01:35:18] 2025-10-22 23:34:37,319 | INFO     | mean y: 2454729.492753623
[2025-10-23 01:35:18] 2025-10-22 23:34:37,319 | INFO     | -- intersect: -26238085738.24767
[2025-10-23 01:35:18] 2025-10-22 23:34:37,319 | INFO     | intersect: -26238085738.24767
[2025-10-23 01:35:18] 2025-10-22 23:34:37,320 | INFO     | chi2: 6.5527594649688945
[2025-10-23 01:35:18] 2025-10-22 23:34:37,320 | INFO     | sum of square deviations: 6171352920.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,323 | INFO     | sum of deviations: 114336144098.00003
[2025-10-23 01:35:18] 2025-10-22 23:34:37,324 | INFO     | mean x: 1761167508.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,324 | INFO     | mean y: 2462145.966789668
[2025-10-23 01:35:18] 2025-10-22 23:34:37,324 | INFO     | -- intersect: -32626542318.001484
[2025-10-23 01:35:18] 2025-10-22 23:34:37,324 | INFO     | intersect: -32626542318.001484
[2025-10-23 01:35:18] 2025-10-22 23:34:37,324 | INFO     | chi2: 5.76316200557587
[2025-10-23 01:35:18] 2025-10-22 23:34:37,325 | INFO     | current chi2=5.76316200557587 (change=12.04984653586354 %)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,325 | INFO     | right removable region: 270
[2025-10-23 01:35:18] 2025-10-22 23:34:37,325 | INFO     | sum of square deviations: 6171352920.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,328 | INFO     | sum of deviations: 2642265019.999996
[2025-10-23 01:35:18] 2025-10-22 23:34:37,328 | INFO     | mean x: 1761167813.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,328 | INFO     | mean y: 2496113.859778598
[2025-10-23 01:35:18] 2025-10-22 23:34:37,328 | INFO     | -- intersect: -751547961.558257
[2025-10-23 01:35:18] 2025-10-22 23:34:37,328 | INFO     | intersect: -751547961.558257
[2025-10-23 01:35:18] 2025-10-22 23:34:37,329 | INFO     | chi2: 1.9923989150788248
[2025-10-23 01:35:18] 2025-10-22 23:34:37,329 | INFO     | current chi2=1.9923989150788248 (change=69.59450555555708 %)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,329 | INFO     | sum of square deviations: 5836025702.5
[2025-10-23 01:35:18] 2025-10-22 23:34:37,332 | INFO     | sum of deviations: -34529131435.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,332 | INFO     | mean x: 1761167965.5
[2025-10-23 01:35:18] 2025-10-22 23:34:37,332 | INFO     | mean y: 2512900.4586466164
[2025-10-23 01:35:18] 2025-10-22 23:34:37,332 | INFO     | -- intersect: 10422549284.775967
[2025-10-23 01:35:18] 2025-10-22 23:34:37,332 | INFO     | intersect: 10422549284.775967
[2025-10-23 01:35:18] 2025-10-22 23:34:37,333 | INFO     | chi2: 0.985914617339025
[2025-10-23 01:35:18] 2025-10-22 23:34:37,333 | INFO     | current chi2=0.985914617339025 (change=50.51620386472558 %)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,334 | INFO     | sum of square deviations: 5513070810.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,336 | INFO     | sum of deviations: -29887550362.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,336 | INFO     | mean x: 1761168118.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,336 | INFO     | mean y: 2510689.2720306516
[2025-10-23 01:35:18] 2025-10-22 23:34:37,337 | INFO     | -- intersect: 9550184324.66177
[2025-10-23 01:35:18] 2025-10-22 23:34:37,337 | INFO     | intersect: 9550184324.66177
[2025-10-23 01:35:18] 2025-10-22 23:34:37,337 | INFO     | chi2: 0.9712114860700732
[2025-10-23 01:35:18] 2025-10-22 23:34:37,337 | INFO     | current chi2=0.9712114860700732 (change=1.4913189246179708 %)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,337 | INFO     | left removable region: 30
[2025-10-23 01:35:18] 2025-10-22 23:34:37,338 | INFO     | sum of square deviations: 4286517580.0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,340 | INFO     | sum of deviations: 10878509694.5
[2025-10-23 01:35:18] 2025-10-22 23:34:37,340 | INFO     | mean x: 1761168392.5
[2025-10-23 01:35:18] 2025-10-22 23:34:37,340 | INFO     | mean y: 2507836.9125
[2025-10-23 01:35:18] 2025-10-22 23:34:37,340 | INFO     | -- intersect: -4467061475.213879
[2025-10-23 01:35:18] 2025-10-22 23:34:37,340 | INFO     | intersect: -4467061475.213879
[2025-10-23 01:35:18] 2025-10-22 23:34:37,341 | INFO     | chi2: 0.0009909304753855112
[2025-10-23 01:35:18] 2025-10-22 23:34:37,341 | INFO     | -- intersect: -4467061475.213879
[2025-10-23 01:35:18] 2025-10-22 23:34:37,341 | INFO     | current memory leak: 2.54 B/s (using 240 data points, chi2=0.00)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,342 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,342 | INFO     | ..............................
[2025-10-23 01:35:18] 2025-10-22 23:34:37,342 | INFO     | . Timing measurements:
[2025-10-23 01:35:18] 2025-10-22 23:34:37,342 | INFO     | . get job = 0 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . initial setup = 9 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . payload setup = 136 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . stage-in = 0 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . payload execution = 16928 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . stage-out = 1 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | . log creation = 0 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,343 | INFO     | ..............................
[2025-10-23 01:35:18] 2025-10-22 23:34:37,602 | INFO     | PID=32589 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,602 | INFO     | .. there are 8 such processes running
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | job summary report
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | --------------------------------------------------
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | PanDA job id: 6853277220
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | task id: 46771637
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | errors: (none)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | pilot state: finished 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | transexitcode: 0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | exeerrorcode: 0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | exeerrordiag: 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | exitcode: 0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | exitmsg: OK
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | cpuconsumptiontime: 62630 s
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | nevents: 400
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | neventsw: 0
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | pid: 6707
[2025-10-23 01:35:18] 2025-10-22 23:34:37,693 | INFO     | pgrp: 6707
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | corecount: 8
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | event service: False
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | sizes: {0: 2348761, 1: 2348960, 12: 2348960, 23: 2348988, 33: 2349016, 44: 2349072, 55: 2349228, 65: 2349256, 76: 2349284, 87: 2349340, 89: 2349630, 98: 2349938, 1
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | --------------------------------------------------
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | 
[2025-10-23 01:35:18] 2025-10-22 23:34:37,694 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-23 01:35:18] 2025-10-22 23:34:37,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-23 01:35:18] 2025-10-22 23:34:37,724 | INFO     | job 6853277220 has completed (purged errors)
[2025-10-23 01:35:18] 2025-10-22 23:34:37,725 | INFO     | overall cleanup function is called
[2025-10-23 01:35:18] 2025-10-22 23:34:38,734 | INFO     | --- collectZombieJob: --- 10, [6707]
[2025-10-23 01:35:18] 2025-10-22 23:34:38,734 | INFO     | zombie collector waiting for pid 6707
[2025-10-23 01:35:18] 2025-10-22 23:34:38,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-23 01:35:18] 2025-10-22 23:34:38,734 | INFO     | collected zombie processes
[2025-10-23 01:35:18] 2025-10-22 23:34:38,734 | INFO     | will attempt to kill all subprocesses of pid=6707
[2025-10-23 01:35:18] 2025-10-22 23:34:38,846 | INFO     | process IDs to be killed: [6707] (in reverse order)
[2025-10-23 01:35:18] 2025-10-22 23:34:39,417 | WARNING  | found no corresponding commands to process id(s)
[2025-10-23 01:35:18] 2025-10-22 23:34:39,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-23 01:35:18] 2025-10-22 23:34:39,421 | INFO     | did not find any defunct processes belonging to 6707
[2025-10-23 01:35:18] 2025-10-22 23:34:39,424 | INFO     | did not find any defunct processes belonging to 6707
[2025-10-23 01:35:18] 2025-10-22 23:34:39,424 | INFO     | ready for new job
[2025-10-23 01:35:18] 2025-10-22 23:34:39,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-23 01:35:18] 2025-10-22 23:34:39,426 | INFO     | ***************************************
[2025-10-23 01:35:18] 2025-10-22 23:34:39,427 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-23 01:35:18] 2025-10-22 23:34:39,427 | INFO     | ***************************************
[2025-10-23 01:35:18] 2025-10-22 23:34:39,427 | INFO     | 
[2025-10-23 01:35:18] 2025-10-22 23:34:39,427 | INFO     | pilot is running in a VM
[2025-10-23 01:35:18] 2025-10-22 23:34:39,428 | INFO     | architecture information:
[2025-10-23 01:35:18] 2025-10-22 23:34:39,432 | INFO     | executing command: cat /etc/os-release
[2025-10-23 01:35:18] 2025-10-22 23:34:39,539 | INFO     | cat /etc/os-release:
[2025-10-23 01:35:18] NAME="CentOS Linux"
[2025-10-23 01:35:18] VERSION="7 (Core)"
[2025-10-23 01:35:18] ID="centos"
[2025-10-23 01:35:18] ID_LIKE="rhel fedora"
[2025-10-23 01:35:18] VERSION_ID="7"
[2025-10-23 01:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-23 01:35:18] ANSI_COLOR="0;31"
[2025-10-23 01:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-23 01:35:18] HOME_URL="https://www.centos.org/"
[2025-10-23 01:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-23 01:35:18] 
[2025-10-23 01:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-23 01:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-23 01:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-23 01:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-23 01:35:18] 
[2025-10-23 01:35:18] 2025-10-22 23:34:39,539 | INFO     | ***************************************
[2025-10-23 01:35:18] 2025-10-22 23:34:40,043 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-23 01:35:18] 2025-10-22 23:34:40,281 | INFO     | sufficient remaining disk space (496510173184 B)
[2025-10-23 01:35:18] 2025-10-22 23:34:40,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-23 01:35:18] 2025-10-22 23:34:40,282 | INFO     | current server update state: UPDATING_FINAL
[2025-10-23 01:35:18] 2025-10-22 23:34:40,282 | INFO     | update_server=False
[2025-10-23 01:35:18] 2025-10-22 23:34:40,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-23 01:35:18] 2025-10-22 23:34:40,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-23 01:35:18] 2025-10-22 23:34:40,286 | INFO     | aborting loop
[2025-10-23 01:35:18] 2025-10-22 23:34:40,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-23 01:35:18] 2025-10-22 23:34:40,462 | INFO     | all payload control threads have been joined
[2025-10-23 01:35:18] 2025-10-22 23:34:41,166 | INFO     | all job control threads have been joined
[2025-10-23 01:35:18] 2025-10-22 23:34:41,288 | INFO     | [job] retrieve thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:41,296 | INFO     | [job] job monitor thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:41,319 | INFO     | all data control threads have been joined
[2025-10-23 01:35:18] 2025-10-22 23:34:41,468 | INFO     | [payload] control thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:41,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:41,697 | INFO     | [payload] validate_post thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,059 | INFO     | [data] copytool_in thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,059 | INFO     | [job] create_data_payload thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,171 | INFO     | [payload] failed_post thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,172 | INFO     | [job] control thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,296 | INFO     | [data] copytool_out thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,325 | INFO     | [data] control thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,374 | INFO     | [payload] validate_pre thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,486 | INFO     | [job] validate thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:42,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-23 01:35:18] 2025-10-22 23:34:42,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-23 01:35:18] 2025-10-22 23:34:42,729 | INFO     | [payload] execute_payloads thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:43,500 | INFO     | [job] queue monitor thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:34:46,576 | INFO     | [data] queue_monitor thread has finished
[2025-10-23 01:35:18] 2025-10-22 23:35:09,771 | INFO     | PID=32589 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-23 01:35:18] 2025-10-22 23:35:09,771 | INFO     | .. there are 9 such processes running
[2025-10-23 01:35:18] 2025-10-22 23:35:09,771 | INFO     | found 0 job(s) in 20 queues
[2025-10-23 01:35:18] 2025-10-22 23:35:09,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-23 01:35:18] 2025-10-22 23:35:09,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-23 01:35:18] 2025-10-22 23:35:09,887 | INFO     | [monitor] cgroup control has ended
[2025-10-23 01:35:18] 2025-10-22 23:35:10,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205492414272)>', '<ExcThread(monitor, started 140205197596416)>']
[2025-10-23 01:35:18] 2025-10-22 23:35:10,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-23 01:35:18] 2025-10-22 23:35:10,780 | INFO     | [monitor] control thread has ended
[2025-10-23 01:35:18] 2025-10-22 23:35:15,069 | INFO     | all workflow threads have been joined
[2025-10-23 01:35:18] 2025-10-22 23:35:15,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-23 01:35:18] 2025-10-22 23:35:15,069 | INFO     | traces error code: 0
[2025-10-23 01:35:18] 2025-10-22 23:35:15,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-23 01:35:18] 2025-10-22 23:35:15,280 [wrapper] ==== pilot stdout END ====
[2025-10-23 01:35:18] 2025-10-22 23:35:15,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-23 01:35:18] 2025-10-22 23:35:15,430 [wrapper] pilotpid: 32589
[2025-10-23 01:35:18] 2025-10-22 23:35:15,442 [wrapper] Pilot exit status: 0
[2025-10-23 01:35:18] 2025-10-22 23:35:15,832 [wrapper] pandaids: 6853277220
[2025-10-23 01:35:18] 2025-10-22 23:35:16,244 [wrapper] cleanup supervisor_pilot 32396 32590
[2025-10-23 01:35:18] 2025-10-22 23:35:16,379 [wrapper] Test setup, not cleaning
[2025-10-23 01:35:18] 2025-10-22 23:35:16,512 [wrapper] apfmon messages muted
[2025-10-23 01:35:18] 2025-10-22 23:35:16,597 [wrapper] ==== wrapper stdout END ====
[2025-10-23 01:35:18] 2025-10-22 23:35:16,686 [wrapper] ==== wrapper stderr END ====
[2025-10-23 01:35:18]  *** Error codes and diagnostics ***
[2025-10-23 01:35:18]     "exeErrorCode": 0,
[2025-10-23 01:35:18]     "exeErrorDiag": "",
[2025-10-23 01:35:18]     "pilotErrorCode": 0,
[2025-10-23 01:35:18]     "pilotErrorDiag": "",
[2025-10-23 01:35:18]  *** Listing of results directory ***
[2025-10-23 01:35:18] total 439952
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc    557409 Oct 22 05:25 pilot3.tar.gz
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc      5112 Oct 22 06:08 queuedata.json
[2025-10-23 01:35:18] -rwx------. 1 boinc boinc     36292 Oct 22 06:10 runpilot2-wrapper.sh
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc       100 Oct 22 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-23 01:35:18] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 20:42 run_atlas
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc       105 Oct 22 20:42 job.xml
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc 230123134 Oct 22 20:42 EVNT.46771634._003209.pool.root.1
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc     15120 Oct 22 20:42 start_atlas.sh
[2025-10-23 01:35:18] drwxrwx--x. 2 boinc boinc        68 Oct 22 20:42 shared
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc    569681 Oct 22 20:42 input.tar.gz
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc      6393 Oct 22 20:42 init_data.xml
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc         0 Oct 22 20:42 boinc_lockfile
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc      2560 Oct 22 20:43 pandaJob.out
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc    978039 Oct 22 20:46 agis_schedconf.cvmfs.json
[2025-10-23 01:35:18] drwx------. 5 boinc boinc      4096 Oct 22 20:46 pilot3
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc 210903183 Oct 23 01:33 HITS.46771637._080290.pool.root.1
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc       531 Oct 23 01:33 boinc_task_state.xml
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc      1019 Oct 23 01:34 memory_monitor_summary.json
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc   1560740 Oct 23 01:34 agis_ddmendpoints.agis.ALL.json
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc    485584 Oct 23 01:34 log.46771637._080290.job.log.tgz.1
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc        95 Oct 23 01:34 pilot_heartbeat.json
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc      7785 Oct 23 01:34 heartbeat.json
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc      4885 Oct 23 01:35 pilotlog.txt
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc   2306792 Oct 23 01:35 log.46771637._080290.job.log.1
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc      8192 Oct 23 01:35 boinc_mmap_file
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc        28 Oct 23 01:35 wrapper_checkpoint.txt
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc       357 Oct 23 01:35 output.list
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc       620 Oct 23 01:35 runtime_log
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc   2816000 Oct 23 01:35 result.tar.gz
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc      8717 Oct 23 01:35 runtime_log.err
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc       656 Oct 23 01:35 HwdLDmOMfV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbh4NDmznf9Dm.diag
[2025-10-23 01:35:18] -rw-r--r--. 1 boinc boinc     20705 Oct 23 01:35 stderr.txt
[2025-10-23 01:35:18] HITS file was successfully produced:
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc 210903183 Oct 23 01:33 shared/HITS.pool.root.1
[2025-10-23 01:35:18]  *** Contents of shared directory: ***
[2025-10-23 01:35:18] total 434024
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc 230123134 Oct 22 20:42 ATLAS.root_0
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc     15120 Oct 22 20:42 start_atlas.sh
[2025-10-23 01:35:18] -rw-r--r--. 2 boinc boinc    569681 Oct 22 20:42 input.tar.gz
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc 210903183 Oct 23 01:33 HITS.pool.root.1
[2025-10-23 01:35:18] -rw-------. 1 boinc boinc   2816000 Oct 23 01:35 result.tar.gz
01:35:20 (28820): run_atlas exited; CPU time 62871.972683
01:35:20 (28820): called boinc_finish(0)

</stderr_txt>
]]>

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