Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 07:32:53 (131658): vboxwrapper version 26210
2025-10-22 07:32:53 (131658): BOINC client version: 7.24.1
2025-10-22 07:32:54 (131658): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-22 07:32:54 (131658): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 07:32:54 (131658): Create VM. (boinc_cc7bb8c0398a507c, slot#0)
2025-10-22 07:32:54 (131658): Setting Memory Size for VM. (4300MB)
2025-10-22 07:32:54 (131658): Setting CPU Count for VM. (3)
2025-10-22 07:32:54 (131658): Setting Chipset Options for VM.
2025-10-22 07:32:54 (131658): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 07:32:54 (131658): Setting Boot Options for VM.
2025-10-22 07:32:54 (131658): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 07:32:54 (131658): Enabling VM Network Access.
2025-10-22 07:32:54 (131658): Disabling USB Support for VM.
2025-10-22 07:32:54 (131658): Disabling COM Port Support for VM.
2025-10-22 07:32:54 (131658): Disabling LPT Port Support for VM.
2025-10-22 07:32:55 (131658): Disabling Audio Support for VM.
2025-10-22 07:32:55 (131658): Disabling Clipboard Support for VM.
2025-10-22 07:32:55 (131658): Disabling Drag and Drop Support for VM.
2025-10-22 07:32:55 (131658): Adding storage controller(s) to VM.
2025-10-22 07:32:55 (131658): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 07:32:55 (131658): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 07:32:55 (131658): forwarding host port 55939 to guest port 80
2025-10-22 07:32:55 (131658): Enabling remote desktop for VM.
2025-10-22 07:32:55 (131658): Required extension pack not installed, remote desktop not enabled.
2025-10-22 07:32:55 (131658): Enabling shared directory for VM.
2025-10-22 07:32:56 (131658): Starting VM using VBoxManage interface. (boinc_cc7bb8c0398a507c, slot#0)
2025-10-22 07:32:57 (131658): Successfully started VM. (PID = '132136')
2025-10-22 07:32:57 (131658): Reporting VM Process ID to BOINC.
2025-10-22 07:32:57 (131658): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-22 07:32:57 (131658): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 07:32:57 (131658): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 07:32:57 (131658): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 07:32:57 (131658): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 07:32:57 (131658): Detected: Web Application Enabled (http://localhost:55939)
2025-10-22 07:32:57 (131658): Preference change detected
2025-10-22 07:32:57 (131658): Setting CPU throttle for VM. (80%)
2025-10-22 07:32:57 (131658): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 07:32:59 (131658): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 07:32:59 (131658): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 07:33:02 (131658): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 07:33:02 (131658): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 07:33:02 (131658): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 07:33:08 (131658): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 07:33:08 (131658): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 07:33:17 (131658): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000156 main     Log opened 2025-10-22T12:33:15.076961000Z
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000273 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000291 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000309 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000310 main     Process ID: 1280
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 07:33:17 (131658): Guest Log: 00:00:00.001476 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 07:33:17 (131658): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 07:33:17 (131658): Guest Log: [INFO] Mounting shared directory
2025-10-22 07:33:17 (131658): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 07:33:44 (131658): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 07:33:44 (131658): Guest Log: [INFO] Detected branch: prod
2025-10-22 07:33:44 (131658): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 07:33:44 (131658): Guest Log: Copying input files
2025-10-22 07:33:45 (131658): Guest Log: Copied input files into RunAtlas.
2025-10-22 07:33:45 (131658): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 07:33:45 (131658): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 07:33:45 (131658): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 07:33:45 (131658): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 07:33:54 (131658): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 07:33:54 (131658): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 07:33:54 (131658): Guest Log: 2.6.3.0 1560 0 32196 151995 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 07:33:55 (131658): Guest Log: copied the webapp to /var/www
2025-10-22 07:33:55 (131658): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-22 07:33:55 (131658): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-22 07:33:56 (131658): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 07:33:56 (131658): Guest Log:  *** Starting ATLAS job. (PandaID=6853276096 taskID=46771637) ***
2025-10-22 07:50:49 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 07:51:10 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 07:51:49 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 07:52:30 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 07:52:50 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 07:53:30 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 09:08:32 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 09:08:52 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 09:09:52 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 09:10:13 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 09:14:25 (131658): Status Report: Elapsed Time: '6000.000000'
2025-10-22 09:14:25 (131658): Status Report: CPU Time: '13573.170000'
2025-10-22 09:23:46 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 09:24:07 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 09:50:54 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 09:51:14 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 10:19:22 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 10:19:42 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 10:54:30 (131658): Status Report: Elapsed Time: '12000.000000'
2025-10-22 10:54:30 (131658): Status Report: CPU Time: '28018.750000'
2025-10-22 11:23:41 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 11:24:20 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 11:50:49 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 11:51:08 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 12:07:03 (131658): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 12:07:44 (131658): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 12:35:14 (131658): Status Report: Elapsed Time: '18000.000000'
2025-10-22 12:35:14 (131658): Status Report: CPU Time: '42143.570000'
2025-10-22 12:35:59 (131658): Guest Log:  *** Job finished ***
2025-10-22 12:35:59 (131658): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:17,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:21,398 | INFO     | [data] queue_monitor thread has finished
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:57,858 | INFO     | [monitor] cgroup control has ended
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:58,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742694266688)>', '<ExcThread(monitor, started 139742079325952)>']
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:58,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:30:58,895 | INFO     | [monitor] control thread has ended
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,305 | INFO     | all workflow threads have been joined
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,305 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,306 | INFO     | traces error code: 0
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,454 [wrapper] ==== pilot stdout END ====
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,466 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,477 [wrapper] pilotpid: 5938
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:03,490 [wrapper] Pilot exit status: 0
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,831 [wrapper] pandaids: 6853276096
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,863 [wrapper] cleanup supervisor_pilot 19755 5939
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,880 [wrapper] Test setup, not cleaning
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,892 [wrapper] apfmon messages muted
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,904 [wrapper] ==== wrapper stdout END ====
2025-10-22 12:35:59 (131658): Guest Log: 2025-10-22 17:31:04,917 [wrapper] ==== wrapper stderr END ====
2025-10-22 12:35:59 (131658): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 12:35:59 (131658): Guest Log:     "exeErrorCode": 0,
2025-10-22 12:35:59 (131658): Guest Log:     "exeErrorDiag": "",
2025-10-22 12:35:59 (131658): Guest Log:     "pilotErrorCode": 0,
2025-10-22 12:35:59 (131658): Guest Log:     "pilotErrorDiag": "",
2025-10-22 12:35:59 (131658): Guest Log:  *** Listing of results directory ***
2025-10-22 12:35:59 (131658): Guest Log: total 210508
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 03:25 pilot3.tar.gz
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 03:30 queuedata.json
2025-10-22 12:35:59 (131658): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 03:32 runpilot2-wrapper.sh
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 22 12:33 start_atlas.sh
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas      6450 Oct 22 12:33 init_data.xml
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas    569677 Oct 22 12:33 input.tar.gz
2025-10-22 12:35:59 (131658): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 12:33 EVNT.46771634._003188.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 12:33 pandaJob.out
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas    977591 Oct 22 12:34 agis_schedconf.cvmfs.json
2025-10-22 12:35:59 (131658): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 12:34 pilot3
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas 206601413 Oct 22 17:28 HITS.46771637._079806.pool.root.1
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 22 17:28 memory_monitor_summary.json
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas         0 Oct 22 17:29 agis_ddmendpoints.agis.ALL.json
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas   1299367 Oct 22 17:29 cric_ddmendpoints.json
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas    427606 Oct 22 17:29 log.46771637._079806.job.log.tgz.1
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 17:29 pilot_heartbeat.json
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 22 17:30 heartbeat.json
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas      4798 Oct 22 17:31 pilotlog.txt
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas   2267546 Oct 22 17:31 log.46771637._079806.job.log.1
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 17:31 output.list
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 17:31 runtime_log
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas   2713600 Oct 22 17:31 result.tar.gz
2025-10-22 12:35:59 (131658): Guest Log: -rw-r--r--. 1 atlas atlas      8694 Oct 22 17:31 runtime_log.err
2025-10-22 12:35:59 (131658): Guest Log: -rw-------. 1 atlas atlas       677 Oct 22 17:31 krONDmjleV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNc4NDmVn58Fm.diag
2025-10-22 12:36:00 (131658): Guest Log: Looking for outputfile HITS.46771637._079806.pool.root.1
2025-10-22 12:36:00 (131658): Guest Log: HITS file was successfully produced
2025-10-22 12:36:00 (131658): Guest Log: -rw-------. 1 atlas atlas 206601413 Oct 22 17:28 /home/atlas/RunAtlas/HITS.46771637._079806.pool.root.1
2025-10-22 12:36:00 (131658): Guest Log: Successfully finished the ATLAS job!
2025-10-22 12:36:00 (131658): Guest Log: Copying the results back to the shared directory!
2025-10-22 12:36:00 (131658): Guest Log:  *** Contents of shared directory: ***
2025-10-22 12:36:00 (131658): Guest Log: total 223936
2025-10-22 12:36:00 (131658): Guest Log: -rw-r--r--. 1 root root 225989423 Oct 22 12:32 ATLAS.root_0
2025-10-22 12:36:00 (131658): Guest Log: -rw-r--r--. 1 root root      6450 Oct 22 12:32 init_data.xml
2025-10-22 12:36:00 (131658): Guest Log: -rw-r--r--. 1 root root    569677 Oct 22 12:32 input.tar.gz
2025-10-22 12:36:00 (131658): Guest Log: -rw-r--r--. 1 root root   2713600 Oct 22  2025 result.tar.gz
2025-10-22 12:36:00 (131658): Guest Log: -rw-r--r--. 1 root root     15120 Oct 22 12:32 start_atlas.sh
2025-10-22 12:36:00 (131658): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 12:36:00 (131658): VM Completion File Detected.
2025-10-22 12:36:00 (131658): Powering off VM.
2025-10-22 12:36:00 (131658): Successfully stopped VM.
2025-10-22 12:36:00 (131658): Deregistering VM. (boinc_cc7bb8c0398a507c, slot#0)
2025-10-22 12:36:00 (131658): Removing network bandwidth throttle group from VM.
2025-10-22 12:36:00 (131658): Removing VM from VirtualBox.
2025-10-22 12:36:05 (131658): called boinc_finish(0)

</stderr_txt>
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