Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 04:11:14 (104101): vboxwrapper version 26210
2025-10-22 04:11:14 (104101): BOINC client version: 7.24.1
2025-10-22 04:11:14 (104101): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-22 04:11:14 (104101): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 04:11:14 (104101): Create VM. (boinc_22086dce363edddf, slot#0)
2025-10-22 04:11:15 (104101): Setting Memory Size for VM. (4300MB)
2025-10-22 04:11:15 (104101): Setting CPU Count for VM. (3)
2025-10-22 04:11:15 (104101): Setting Chipset Options for VM.
2025-10-22 04:11:15 (104101): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 04:11:15 (104101): Setting Boot Options for VM.
2025-10-22 04:11:15 (104101): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 04:11:15 (104101): Enabling VM Network Access.
2025-10-22 04:11:15 (104101): Disabling USB Support for VM.
2025-10-22 04:11:15 (104101): Disabling COM Port Support for VM.
2025-10-22 04:11:15 (104101): Disabling LPT Port Support for VM.
2025-10-22 04:11:15 (104101): Disabling Audio Support for VM.
2025-10-22 04:11:15 (104101): Disabling Clipboard Support for VM.
2025-10-22 04:11:15 (104101): Disabling Drag and Drop Support for VM.
2025-10-22 04:11:16 (104101): Adding storage controller(s) to VM.
2025-10-22 04:11:16 (104101): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 04:11:16 (104101): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 04:11:16 (104101): forwarding host port 44067 to guest port 80
2025-10-22 04:11:16 (104101): Enabling remote desktop for VM.
2025-10-22 04:11:16 (104101): Required extension pack not installed, remote desktop not enabled.
2025-10-22 04:11:16 (104101): Enabling shared directory for VM.
2025-10-22 04:11:17 (104101): Starting VM using VBoxManage interface. (boinc_22086dce363edddf, slot#0)
2025-10-22 04:11:18 (104101): Successfully started VM. (PID = '104581')
2025-10-22 04:11:18 (104101): Reporting VM Process ID to BOINC.
2025-10-22 04:11:18 (104101): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-22 04:11:18 (104101): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 04:11:18 (104101): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 04:11:18 (104101): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 04:11:18 (104101): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 04:11:18 (104101): Detected: Web Application Enabled (http://localhost:44067)
2025-10-22 04:11:18 (104101): Preference change detected
2025-10-22 04:11:18 (104101): Setting CPU throttle for VM. (80%)
2025-10-22 04:11:18 (104101): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 04:11:20 (104101): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 04:11:20 (104101): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 04:11:22 (104101): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 04:11:43 (104101): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 04:11:44 (104101): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 04:11:44 (104101): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 04:11:44 (104101): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 04:11:52 (104101): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 04:12:12 (104101): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 04:12:12 (104101): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 04:12:12 (104101): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 04:12:19 (104101): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000183 main     Log opened 2025-10-22T09:11:36.840809000Z
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000364 main     OS Product: Linux
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000602 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000640 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000664 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000665 main     Process ID: 1279
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.000666 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 04:12:19 (104101): Guest Log: 00:00:00.001706 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 04:12:19 (104101): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 04:12:19 (104101): Guest Log: [INFO] Mounting shared directory
2025-10-22 04:12:19 (104101): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 04:12:24 (104101): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 04:12:24 (104101): Guest Log: [INFO] Detected branch: prod
2025-10-22 04:12:24 (104101): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 04:12:24 (104101): Guest Log: Copying input files
2025-10-22 04:12:25 (104101): Guest Log: Copied input files into RunAtlas.
2025-10-22 04:12:25 (104101): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 04:12:25 (104101): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 04:12:25 (104101): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 04:12:25 (104101): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 04:12:34 (104101): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 04:12:34 (104101): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 04:12:34 (104101): Guest Log: 2.6.3.0 1555 0 30164 151988 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 04:12:36 (104101): Guest Log: copied the webapp to /var/www
2025-10-22 04:12:36 (104101): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-22 04:12:36 (104101): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-22 04:12:37 (104101): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 04:12:37 (104101): Guest Log:  *** Starting ATLAS job. (PandaID=6853515244 taskID=46809188) ***
2025-10-22 05:23:51 (104101): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 05:24:10 (104101): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 05:50:57 (104101): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 05:51:18 (104101): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 05:51:45 (104101): Status Report: Elapsed Time: '6000.000000'
2025-10-22 05:51:45 (104101): Status Report: CPU Time: '13989.610000'
2025-10-22 07:23:52 (104101): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 07:24:12 (104101): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 07:31:07 (104101): Status Report: Elapsed Time: '12000.000000'
2025-10-22 07:31:07 (104101): Status Report: CPU Time: '28240.110000'
2025-10-22 07:32:29 (104101): Guest Log:  *** Job finished ***
2025-10-22 07:32:29 (104101): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:27,557 | INFO     | [job] queue monitor thread has finished
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:31,043 | INFO     | [data] queue_monitor thread has finished
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:44,896 | INFO     | [monitor] cgroup control has ended
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:46,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696534759232)>', '<ExcThread(monitor, started 139695279302400)>']
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:47,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:47,286 | INFO     | [monitor] control thread has ended
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,339 | INFO     | all workflow threads have been joined
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,339 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,340 | INFO     | traces error code: 0
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,466 [wrapper] ==== pilot stdout END ====
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,471 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,477 [wrapper] pilotpid: 5936
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,485 [wrapper] Pilot exit status: 0
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,555 [wrapper] pandaids: 6853515244
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,631 [wrapper] cleanup supervisor_pilot 10948 5937
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,641 [wrapper] Test setup, not cleaning
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,652 [wrapper] apfmon messages muted
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,665 [wrapper] ==== wrapper stdout END ====
2025-10-22 07:32:29 (104101): Guest Log: 2025-10-22 12:30:51,678 [wrapper] ==== wrapper stderr END ====
2025-10-22 07:32:29 (104101): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 07:32:29 (104101): Guest Log:     "exeErrorCode": 0,
2025-10-22 07:32:29 (104101): Guest Log:     "exeErrorDiag": "",
2025-10-22 07:32:29 (104101): Guest Log:     "pilotErrorCode": 0,
2025-10-22 07:32:29 (104101): Guest Log:     "pilotErrorDiag": "",
2025-10-22 07:32:29 (104101): Guest Log:  *** Listing of results directory ***
2025-10-22 07:32:29 (104101): Guest Log: total 152364
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 07:19 pilot3.tar.gz
2025-10-22 07:32:29 (104101): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 07:27 runpilot2-wrapper.sh
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 07:28 queuedata.json
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 22 09:11 start_atlas.sh
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas      6450 Oct 22 09:11 init_data.xml
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas    569670 Oct 22 09:11 input.tar.gz
2025-10-22 07:32:29 (104101): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 09:11 EVNT.46809186._000208.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas      2492 Oct 22 09:11 pandaJob.out
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas    977719 Oct 22 09:12 agis_schedconf.cvmfs.json
2025-10-22 07:32:29 (104101): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 09:12 pilot3
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas 148377348 Oct 22 12:29 HITS.46809188._005406.pool.root.1
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 22 12:29 memory_monitor_summary.json
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 12:29 agis_ddmendpoints.agis.ALL.json
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas    358063 Oct 22 12:29 log.46809188._005406.job.log.tgz.1
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 12:30 pilot_heartbeat.json
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas      7817 Oct 22 12:30 heartbeat.json
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 22 12:30 pilotlog.txt
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas   1550464 Oct 22 12:30 log.46809188._005406.job.log.1
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 12:30 output.list
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 12:30 runtime_log
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas   1925120 Oct 22 12:30 result.tar.gz
2025-10-22 07:32:29 (104101): Guest Log: -rw-r--r--. 1 atlas atlas      8694 Oct 22 12:30 runtime_log.err
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas       676 Oct 22 12:30 GE7KDmsxLV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmo6eMDmK3Bifn.diag
2025-10-22 07:32:29 (104101): Guest Log: Looking for outputfile HITS.46809188._005406.pool.root.1
2025-10-22 07:32:29 (104101): Guest Log: HITS file was successfully produced
2025-10-22 07:32:29 (104101): Guest Log: -rw-------. 1 atlas atlas 148377348 Oct 22 12:29 /home/atlas/RunAtlas/HITS.46809188._005406.pool.root.1
2025-10-22 07:32:29 (104101): Guest Log: Successfully finished the ATLAS job!
2025-10-22 07:32:29 (104101): Guest Log: Copying the results back to the shared directory!
2025-10-22 07:32:29 (104101): Guest Log:  *** Contents of shared directory: ***
2025-10-22 07:32:30 (104101): Guest Log: total 187976
2025-10-22 07:32:30 (104101): Guest Log: -rw-r--r--. 1 root root 189958644 Oct 22 09:11 ATLAS.root_0
2025-10-22 07:32:30 (104101): Guest Log: -rw-r--r--. 1 root root      6450 Oct 22 09:11 init_data.xml
2025-10-22 07:32:30 (104101): Guest Log: -rw-r--r--. 1 root root    569670 Oct 22 09:11 input.tar.gz
2025-10-22 07:32:30 (104101): Guest Log: -rw-r--r--. 1 root root   1925120 Oct 22  2025 result.tar.gz
2025-10-22 07:32:30 (104101): Guest Log: -rw-r--r--. 1 root root     15120 Oct 22 09:11 start_atlas.sh
2025-10-22 07:32:30 (104101): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 07:32:30 (104101): VM Completion File Detected.
2025-10-22 07:32:30 (104101): Powering off VM.
2025-10-22 07:32:30 (104101): Successfully stopped VM.
2025-10-22 07:32:30 (104101): Deregistering VM. (boinc_22086dce363edddf, slot#0)
2025-10-22 07:32:30 (104101): Removing network bandwidth throttle group from VM.
2025-10-22 07:32:30 (104101): Removing VM from VirtualBox.
2025-10-22 07:32:35 (104101): called boinc_finish(0)

</stderr_txt>
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