Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:18 (1522686): wrapper (7.7.26015): starting
20:48:18 (1522686): wrapper: running run_atlas (--nthreads 3)
[2025-10-22 20:48:18] Arguments: --nthreads 3
[2025-10-22 20:48:18] Threads: 3
[2025-10-22 20:48:18] Checking for CVMFS
[2025-10-22 20:48:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 20:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 20:48:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 20:48:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 20:48:18] 2.9.2.0 788955 2484 81052 152005 2 57 31504065 36864000 0 130560 0 1931116 99.989 91030 929 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-22 20:48:18] CVMFS is ok
[2025-10-22 20:48:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 20:48:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 20:48:18] Further information can be found at the LHC@home message board.
[2025-10-22 20:48:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 20:48:18] Checking for apptainer binary...
[2025-10-22 20:48:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 20:48:18] Running /usr/bin/apptainer --version
[2025-10-22 20:48:18] apptainer version 1.4.1-1.1
[2025-10-22 20:48:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 20:48:18] magicA161
[2025-10-22 20:48:18] apptainer works
[2025-10-22 20:48:18] Set ATHENA_PROC_NUMBER=3
[2025-10-22 20:48:18] Set ATHENA_CORE_NUMBER=3
[2025-10-22 20:48:18] Starting ATLAS job with PandaID=6853250949
[2025-10-22 20:48:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 22:16:36]  *** The last 200 lines of the pilot log: ***
[2025-10-22 22:16:36] 2025-10-22 20:16:17,446 | INFO     | did not find any defunct processes belonging to 1532835
[2025-10-22 22:16:36] 2025-10-22 20:16:17,446 | INFO     | ready for new job
[2025-10-22 22:16:36] 2025-10-22 20:16:17,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 22:16:36] 2025-10-22 20:16:17,447 | INFO     | ***************************************
[2025-10-22 22:16:36] 2025-10-22 20:16:17,447 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 22:16:36] 2025-10-22 20:16:17,447 | INFO     | ***************************************
[2025-10-22 22:16:36] 2025-10-22 20:16:17,447 | INFO     | 
[2025-10-22 22:16:36] 2025-10-22 20:16:17,448 | INFO     | architecture information:
[2025-10-22 22:16:36] 2025-10-22 20:16:17,448 | INFO     | executing command: cat /etc/os-release
[2025-10-22 22:16:36] 2025-10-22 20:16:17,456 | INFO     | cat /etc/os-release:
[2025-10-22 22:16:36] NAME="CentOS Linux"
[2025-10-22 22:16:36] VERSION="7 (Core)"
[2025-10-22 22:16:36] ID="centos"
[2025-10-22 22:16:36] ID_LIKE="rhel fedora"
[2025-10-22 22:16:36] VERSION_ID="7"
[2025-10-22 22:16:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 22:16:36] ANSI_COLOR="0;31"
[2025-10-22 22:16:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 22:16:36] HOME_URL="https://www.centos.org/"
[2025-10-22 22:16:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 22:16:36] 
[2025-10-22 22:16:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 22:16:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 22:16:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 22:16:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 22:16:36] 
[2025-10-22 22:16:36] 2025-10-22 20:16:17,457 | INFO     | ***************************************
[2025-10-22 22:16:36] 2025-10-22 20:16:17,960 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-22 22:16:36] 2025-10-22 20:16:17,973 | INFO     | sufficient remaining disk space (373026717696 B)
[2025-10-22 22:16:36] 2025-10-22 20:16:17,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 22:16:36] 2025-10-22 20:16:17,973 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | INFO     | update_server=False
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 22:16:36] 2025-10-22 20:16:17,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 22:16:36] 2025-10-22 20:16:18,143 | INFO     | all payload control threads have been joined
[2025-10-22 22:16:36] 2025-10-22 20:16:18,431 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 22:16:36] 2025-10-22 20:16:18,431 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 22:16:36] 2025-10-22 20:16:18,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 22:16:36] 2025-10-22 20:16:18,432 | INFO     | will abort loop
[2025-10-22 22:16:36] 2025-10-22 20:16:18,530 | INFO     | all data control threads have been joined
[2025-10-22 22:16:36] 2025-10-22 20:16:18,978 | INFO     | [job] queue monitor thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:18,978 | INFO     | [job] retrieve thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,149 | INFO     | [payload] control thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,150 | INFO     | all job control threads have been joined
[2025-10-22 22:16:36] 2025-10-22 20:16:19,293 | INFO     | [payload] validate_post thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,437 | INFO     | [job] job monitor thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,525 | INFO     | [payload] failed_post thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,535 | INFO     | [data] control thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,892 | INFO     | [data] copytool_in thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:19,980 | INFO     | [data] copytool_out thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:20,156 | INFO     | [job] control thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:20,165 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:20,347 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:20,353 | INFO     | [job] validate thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:20,371 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:21,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 22:16:36] 2025-10-22 20:16:25,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:28,930 | INFO     | job.realtimelogging is not enabled
[2025-10-22 22:16:36] 2025-10-22 20:16:29,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 22:16:36] 2025-10-22 20:16:30,517 | INFO     | [monitor] cgroup control has ended
[2025-10-22 22:16:36] 2025-10-22 20:16:31,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797750339392)>', '<ExcThread(monitor, started 139796286535424)>']
[2025-10-22 22:16:36] 2025-10-22 20:16:32,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 22:16:36] 2025-10-22 20:16:32,042 | INFO     | [monitor] control thread has ended
[2025-10-22 22:16:36] 2025-10-22 20:16:36,540 | INFO     | all workflow threads have been joined
[2025-10-22 22:16:36] 2025-10-22 20:16:36,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 22:16:36] 2025-10-22 20:16:36,541 | INFO     | traces error code: 0
[2025-10-22 22:16:36] 2025-10-22 20:16:36,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 22:16:36] 2025-10-22 20:16:36,590 [wrapper] ==== pilot stdout END ====
[2025-10-22 22:16:36] 2025-10-22 20:16:36,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 22:16:36] 2025-10-22 20:16:36,595 [wrapper] pilotpid: 1526404
[2025-10-22 22:16:36] 2025-10-22 20:16:36,598 [wrapper] Pilot exit status: 0
[2025-10-22 22:16:36] 2025-10-22 20:16:36,605 [wrapper] pandaids: 6853250949
[2025-10-22 22:16:36] 2025-10-22 20:16:36,622 [wrapper] cleanup supervisor_pilot 1545086 1526405
[2025-10-22 22:16:36] 2025-10-22 20:16:36,625 [wrapper] Test setup, not cleaning
[2025-10-22 22:16:36] 2025-10-22 20:16:36,627 [wrapper] apfmon messages muted
[2025-10-22 22:16:36] 2025-10-22 20:16:36,630 [wrapper] ==== wrapper stdout END ====
[2025-10-22 22:16:36] 2025-10-22 20:16:36,632 [wrapper] ==== wrapper stderr END ====
[2025-10-22 22:16:36]  *** Error codes and diagnostics ***
[2025-10-22 22:16:36]     "exeErrorCode": 0,
[2025-10-22 22:16:36]     "exeErrorDiag": "",
[2025-10-22 22:16:36]     "pilotErrorCode": 0,
[2025-10-22 22:16:36]     "pilotErrorDiag": "",
[2025-10-22 22:16:36]  *** Listing of results directory ***
[2025-10-22 22:16:36] total 432444
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc    557409 Oct 22 02:25 pilot3.tar.gz
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      5112 Oct 22 02:53 queuedata.json
[2025-10-22 22:16:36] -rwx------ 1 boinc boinc     36292 Oct 22 02:55 runpilot2-wrapper.sh
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc       100 Oct 22 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 22:16:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 20:48 run_atlas
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc       105 Oct 22 20:48 job.xml
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc 226913619 Oct 22 20:48 EVNT.46771634._003107.pool.root.1
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc    569677 Oct 22 20:48 input.tar.gz
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc     15120 Oct 22 20:48 start_atlas.sh
[2025-10-22 22:16:36] drwxrwx--x 2 boinc boinc      4096 Oct 22 20:48 shared
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc         0 Oct 22 20:48 boinc_setup_complete
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      6449 Oct 22 20:48 init_data.xml
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc         0 Oct 22 20:48 boinc_lockfile
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      2560 Oct 22 20:48 pandaJob.out
[2025-10-22 22:16:36] -rw------- 1 boinc boinc    978039 Oct 22 20:48 agis_schedconf.cvmfs.json
[2025-10-22 22:16:36] -rw------- 1 boinc boinc   1560740 Oct 22 20:48 agis_ddmendpoints.agis.ALL.json
[2025-10-22 22:16:36] drwx------ 5 boinc boinc      4096 Oct 22 20:48 pilot3
[2025-10-22 22:16:36] -rw------- 1 boinc boinc 209983756 Oct 22 22:15 HITS.46771637._077925.pool.root.1
[2025-10-22 22:16:36] -rw------- 1 boinc boinc        95 Oct 22 22:15 pilot_heartbeat.json
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc       529 Oct 22 22:15 boinc_task_state.xml
[2025-10-22 22:16:36] -rw------- 1 boinc boinc      1016 Oct 22 22:16 memory_monitor_summary.json
[2025-10-22 22:16:36] -rw------- 1 boinc boinc    245635 Oct 22 22:16 log.46771637._077925.job.log.tgz.1
[2025-10-22 22:16:36] -rw------- 1 boinc boinc      7757 Oct 22 22:16 heartbeat.json
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc        27 Oct 22 22:16 wrapper_checkpoint.txt
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      8192 Oct 22 22:16 boinc_mmap_file
[2025-10-22 22:16:36] -rw------- 1 boinc boinc      4814 Oct 22 22:16 pilotlog.txt
[2025-10-22 22:16:36] -rw------- 1 boinc boinc    770238 Oct 22 22:16 log.46771637._077925.job.log.1
[2025-10-22 22:16:36] -rw------- 1 boinc boinc       357 Oct 22 22:16 output.list
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc       620 Oct 22 22:16 runtime_log
[2025-10-22 22:16:36] -rw------- 1 boinc boinc   1034240 Oct 22 22:16 result.tar.gz
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      8792 Oct 22 22:16 runtime_log.err
[2025-10-22 22:16:36] -rw------- 1 boinc boinc       661 Oct 22 22:16 ktxLDm0JcV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRE4NDm77fosn.diag
[2025-10-22 22:16:36] -rw-r--r-- 1 boinc boinc      9887 Oct 22 22:16 stderr.txt
[2025-10-22 22:16:36] HITS file was successfully produced:
[2025-10-22 22:16:36] -rw------- 1 boinc boinc 209983756 Oct 22 22:15 shared/HITS.pool.root.1
[2025-10-22 22:16:36]  *** Contents of shared directory: ***
[2025-10-22 22:16:36] total 428256
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc 226913619 Oct 22 20:48 ATLAS.root_0
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc    569677 Oct 22 20:48 input.tar.gz
[2025-10-22 22:16:36] -rw-r--r-- 2 boinc boinc     15120 Oct 22 20:48 start_atlas.sh
[2025-10-22 22:16:36] -rw------- 1 boinc boinc 209983756 Oct 22 22:15 HITS.pool.root.1
[2025-10-22 22:16:36] -rw------- 1 boinc boinc   1034240 Oct 22 22:16 result.tar.gz
22:16:38 (1522686): run_atlas exited; CPU time 15148.388573
22:16:38 (1522686): called boinc_finish(0)

</stderr_txt>
]]>

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