Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 01:19:46 (11832): vboxwrapper version 26210
2025-10-22 01:19:46 (11832): BOINC client version: 8.0.2
2025-10-22 01:19:47 (11832): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-22 01:19:47 (11832): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 01:19:48 (11832): Create VM. (boinc_3e1e09687ec95869, slot#7)
2025-10-22 01:19:48 (11832): Setting Memory Size for VM. (4600MB)
2025-10-22 01:19:48 (11832): Setting CPU Count for VM. (6)
2025-10-22 01:19:49 (11832): Setting Chipset Options for VM.
2025-10-22 01:19:49 (11832): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 01:19:49 (11832): Setting Boot Options for VM.
2025-10-22 01:19:50 (11832): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 01:19:50 (11832): Enabling VM Network Access.
2025-10-22 01:19:50 (11832): Disabling USB Support for VM.
2025-10-22 01:19:51 (11832): Disabling COM Port Support for VM.
2025-10-22 01:19:51 (11832): Disabling LPT Port Support for VM.
2025-10-22 01:19:51 (11832): Disabling Audio Support for VM.
2025-10-22 01:19:51 (11832): Disabling Clipboard Support for VM.
2025-10-22 01:19:52 (11832): Disabling Drag and Drop Support for VM.
2025-10-22 01:19:52 (11832): Adding storage controller(s) to VM.
2025-10-22 01:19:52 (11832): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 01:19:53 (11832): Adding VirtualBox Guest Additions to VM.
2025-10-22 01:19:53 (11832): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 01:19:53 (11832): forwarding host port 1773 to guest port 80
2025-10-22 01:19:54 (11832): Enabling remote desktop for VM.
2025-10-22 01:19:54 (11832): Required extension pack not installed, remote desktop not enabled.
2025-10-22 01:19:54 (11832): Enabling shared directory for VM.
2025-10-22 01:19:55 (11832): Starting VM using VBoxManage interface. (boinc_3e1e09687ec95869, slot#7)
2025-10-22 01:20:05 (11832): Successfully started VM. (PID = '12252')
2025-10-22 01:20:05 (11832): Reporting VM Process ID to BOINC.
2025-10-22 01:20:05 (11832): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-22 01:20:05 (11832): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 01:20:05 (11832): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 01:20:05 (11832): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 01:20:05 (11832): Detected: Web Application Enabled (http://localhost:1773)
2025-10-22 01:20:05 (11832): Preference change detected
2025-10-22 01:20:05 (11832): Setting CPU throttle for VM. (100%)
2025-10-22 01:20:05 (11832): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 01:20:07 (11832): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 01:20:07 (11832): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 01:20:13 (11832): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 01:20:13 (11832): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 01:20:13 (11832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 01:20:23 (11832): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 01:20:23 (11832): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-22 01:20:44 (11832): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.000566 main     Log opened 2025-10-22T01:20:42.334550000Z
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.000838 main     OS Product: Linux
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.000934 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.001024 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.001120 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.001123 main     Process ID: 1340
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.001125 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 01:20:44 (11832): Guest Log: 00:00:00.007218 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 01:20:44 (11832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 01:20:44 (11832): Guest Log: [INFO] Mounting shared directory
2025-10-22 01:20:44 (11832): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 01:20:54 (11832): Guest Log: 00:00:10.017030 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 078 761 000ns (GuestNow=1 761 121 253 424 851 000 ns GuestLast=1 761 096 042 346 090 000 ns fSetTimeLastLoop=true )
2025-10-22 01:21:16 (11832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 01:21:16 (11832): Guest Log: [INFO] Detected branch: prod
2025-10-22 01:21:16 (11832): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 01:21:16 (11832): Guest Log: Copying input files
2025-10-22 01:21:20 (11832): Guest Log: Copied input files into RunAtlas.
2025-10-22 01:21:20 (11832): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 01:21:20 (11832): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 01:21:20 (11832): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 01:21:20 (11832): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 01:22:25 (11832): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 01:22:26 (11832): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 01:22:26 (11832): Guest Log: 2.6.3.0 1644 1 32204 151988 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 01:22:27 (11832): Guest Log: copied the webapp to /var/www
2025-10-22 01:22:28 (11832): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-22 01:22:28 (11832): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-22 01:22:28 (11832): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 01:22:28 (11832): Guest Log:  *** Starting ATLAS job. (PandaID=6853255290 taskID=46771637) ***
2025-10-22 03:00:10 (11832): Status Report: Elapsed Time: '6000.000000'
2025-10-22 03:00:10 (11832): Status Report: CPU Time: '27448.984375'
2025-10-22 04:40:16 (11832): Status Report: Elapsed Time: '12000.000000'
2025-10-22 04:40:16 (11832): Status Report: CPU Time: '62723.234375'
2025-10-22 06:20:22 (11832): Status Report: Elapsed Time: '18000.000000'
2025-10-22 06:20:22 (11832): Status Report: CPU Time: '98028.703125'
2025-10-22 08:00:32 (11832): Status Report: Elapsed Time: '24000.000000'
2025-10-22 08:00:32 (11832): Status Report: CPU Time: '133492.984375'
2025-10-22 09:40:38 (11832): Status Report: Elapsed Time: '30000.000000'
2025-10-22 09:40:38 (11832): Status Report: CPU Time: '168771.453125'
2025-10-22 10:30:27 (11832): Guest Log:  *** Job finished ***
2025-10-22 10:30:27 (11832): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,099 | INFO     | PID=6065 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,100 | INFO     | found 0 job(s) in 20 queues
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:21,101 | INFO     | [monitor] control thread has ended
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:25,870 | INFO     | all workflow threads have been joined
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:25,870 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:25,871 | INFO     | traces error code: 0
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:25,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,090 [wrapper] ==== pilot stdout END ====
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,104 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,117 [wrapper] pilotpid: 6065
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,131 [wrapper] Pilot exit status: 0
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,229 [wrapper] pandaids: 6853255290
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,318 [wrapper] cleanup supervisor_pilot  9248 6066
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,334 [wrapper] Test setup, not cleaning
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,348 [wrapper] apfmon messages muted
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,361 [wrapper] ==== wrapper stdout END ====
2025-10-22 10:30:27 (11832): Guest Log: 2025-10-22 17:30:26,375 [wrapper] ==== wrapper stderr END ====
2025-10-22 10:30:27 (11832): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 10:30:27 (11832): Guest Log:     "exeErrorCode": 0,
2025-10-22 10:30:27 (11832): Guest Log:     "exeErrorDiag": "",
2025-10-22 10:30:27 (11832): Guest Log:     "pilotErrorCode": 0,
2025-10-22 10:30:27 (11832): Guest Log:     "pilotErrorDiag": "",
2025-10-22 10:30:27 (11832): Guest Log:  *** Listing of results directory ***
2025-10-22 10:30:27 (11832): Guest Log: total 210972
2025-10-22 10:30:27 (11832): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 02:24 pilot3.tar.gz
2025-10-22 10:30:27 (11832): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 02:50 runpilot2-wrapper.sh
2025-10-22 10:30:27 (11832): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 02:50 queuedata.json
2025-10-22 10:30:27 (11832): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Oct 22 08:21 init_data.xml
2025-10-22 10:30:27 (11832): Guest Log: -rwxr-xr-x. 1 atlas atlas    569675 Oct 22 08:21 input.tar.gz
2025-10-22 10:30:27 (11832): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 08:21 start_atlas.sh
2025-10-22 10:30:27 (11832): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 08:21 EVNT.46771634._003161.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 10:30:27 (11832): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 08:22 pandaJob.out
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas    977719 Oct 22 08:23 agis_schedconf.cvmfs.json
2025-10-22 10:30:27 (11832): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 08:23 pilot3
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas 202465308 Oct 22 17:28 HITS.46771637._079209.pool.root.1
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas      1029 Oct 22 17:29 memory_monitor_summary.json
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 17:29 agis_ddmendpoints.agis.ALL.json
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas    672349 Oct 22 17:29 log.46771637._079209.job.log.tgz.1
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 17:29 pilot_heartbeat.json
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 22 17:29 heartbeat.json
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 22 17:30 pilotlog.txt
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas   4192739 Oct 22 17:30 log.46771637._079209.job.log.1
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 17:30 output.list
2025-10-22 10:30:27 (11832): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 17:30 runtime_log
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas   4884480 Oct 22 17:30 result.tar.gz
2025-10-22 10:30:27 (11832): Guest Log: -rw-r--r--. 1 atlas atlas      8667 Oct 22 17:30 runtime_log.err
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas       669 Oct 22 17:30 koULDm36dV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCV4NDm4Namqn.diag
2025-10-22 10:30:27 (11832): Guest Log: Looking for outputfile HITS.46771637._079209.pool.root.1
2025-10-22 10:30:27 (11832): Guest Log: HITS file was successfully produced
2025-10-22 10:30:27 (11832): Guest Log: -rw-------. 1 atlas atlas 202465308 Oct 22 17:28 /home/atlas/RunAtlas/HITS.46771637._079209.pool.root.1
2025-10-22 10:30:30 (11832): Guest Log: Successfully finished the ATLAS job!
2025-10-22 10:30:30 (11832): Guest Log: Copying the results back to the shared directory!
2025-10-22 10:30:30 (11832): Guest Log:  *** Contents of shared directory: ***
2025-10-22 10:30:30 (11832): Guest Log: total 424428
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root 226654124 Oct 22 08:19 ATLAS.root_0
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root 202465308 Oct 22 17:30 HITS.pool.root.1
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root      9204 Oct 22 08:19 init_data.xml
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root    569675 Oct 22 08:19 input.tar.gz
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root   4884480 Oct 22 17:30 result.tar.gz
2025-10-22 10:30:30 (11832): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 22 08:19 start_atlas.sh
2025-10-22 10:30:30 (11832): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 10:30:30 (11832): VM Completion File Detected.
2025-10-22 10:30:30 (11832): Powering off VM.
2025-10-22 10:30:31 (11832): Successfully stopped VM.
2025-10-22 10:30:31 (11832): Deregistering VM. (boinc_3e1e09687ec95869, slot#7)
2025-10-22 10:30:32 (11832): Removing network bandwidth throttle group from VM.
2025-10-22 10:30:32 (11832): Removing VM from VirtualBox.
2025-10-22 10:30:37 (11832): called boinc_finish(0)

</stderr_txt>
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