Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:52:35 (6598): wrapper (7.7.26015): starting
03:52:35 (6598): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 03:52:35] Arguments: --nthreads 8
[2025-10-22 03:52:35] Threads: 8
[2025-10-22 03:52:35] Checking for CVMFS
[2025-10-22 03:52:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 03:52:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 03:52:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 03:52:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 03:52:36] 2.11.2.0 3026 27935 79460 151987 1 56 14384577 20275201 1 130560 0 15779924 99.982 1241264 37064 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 03:52:36] CVMFS is ok
[2025-10-22 03:52:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 03:52:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 03:52:36] Further information can be found at the LHC@home message board.
[2025-10-22 03:52:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 03:52:36] Checking for apptainer binary...
[2025-10-22 03:52:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 03:52:36] Running /usr/bin/apptainer --version
[2025-10-22 03:52:36] apptainer version 1.3.2-1.el7
[2025-10-22 03:52:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 03:52:37] c-204-25.aglt2.org
[2025-10-22 03:52:37] apptainer works
[2025-10-22 03:52:37] Set ATHENA_PROC_NUMBER=8
[2025-10-22 03:52:37] Set ATHENA_CORE_NUMBER=8
[2025-10-22 03:52:37] Starting ATLAS job with PandaID=6854663433
[2025-10-22 03:52:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 05:30:10]  *** The last 200 lines of the pilot log: ***
[2025-10-22 05:30:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/5c/log.46809188._006407.job.log.tgz.1
[2025-10-22 05:30:10]  workdir=None
[2025-10-22 05:30:10] ]
[2025-10-22 05:30:10] 2025-10-22 09:28:53,068 | INFO     | transferring file log.46809188._006407.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6854663433/log.46809188._006407.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-22 05:30:10] 2025-10-22 09:28:53,068 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6854663433/log.46809188._006407.job.log.tgz.1 /tmp/boinchome/slots/0/log.46809188._006407.job
[2025-10-22 05:30:10] 2025-10-22 09:28:53,095 | INFO     | adding to output.list: log.46809188._006407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/5c/log.46809188._006407.job.log.tg
[2025-10-22 05:30:10] 2025-10-22 09:28:53,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 05:30:10] 2025-10-22 09:28:53,097 | INFO     | summary of transferred files:
[2025-10-22 05:30:10] 2025-10-22 09:28:53,097 | INFO     |  -- lfn=log.46809188._006407.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 05:30:10] 2025-10-22 09:28:53,097 | INFO     | stage-out finished correctly
[2025-10-22 05:30:10] 2025-10-22 09:28:53,167 | INFO     | monitor loop #428: job 0:6854663433 is in state 'finished'
[2025-10-22 05:30:10] 2025-10-22 09:28:53,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 05:30:10] 2025-10-22 09:28:54,039 | INFO     | PID=11355 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 05:30:10] 2025-10-22 09:28:55,040 | INFO     | time since job start (5760s) is within the limit (172800.0s)
[2025-10-22 05:30:10] 2025-10-22 09:28:55,681 | INFO     | monitor loop #429: job 0:6854663433 is in state 'finished'
[2025-10-22 05:30:10] 2025-10-22 09:28:55,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 05:30:10] 2025-10-22 09:28:56,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 05:30:10] 2025-10-22 09:28:57,043 | INFO     | time since job start (5762s) is within the limit (172800.0s)
[2025-10-22 05:30:10] 2025-10-22 09:28:57,289 | INFO     | job 6854663433 has state=finished
[2025-10-22 05:30:10] 2025-10-22 09:28:57,289 | INFO     | preparing for final server update for job 6854663433 in state='finished'
[2025-10-22 05:30:10] 2025-10-22 09:28:57,290 | INFO     | this job has now completed (state=finished)
[2025-10-22 05:30:10] 2025-10-22 09:28:57,290 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 05:30:10] 2025-10-22 09:28:57,290 | INFO     | log transfer has been attempted: DONE
[2025-10-22 05:30:10] 2025-10-22 09:28:57,290 | INFO     | job 6854663433 has finished - writing final server update
[2025-10-22 05:30:10] 2025-10-22 09:28:57,291 | INFO     | total number of processed events: 400 (read)
[2025-10-22 05:30:10] 2025-10-22 09:28:57,292 | INFO     | executing command: lscpu
[2025-10-22 05:30:10] 2025-10-22 09:28:57,321 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 05:30:10] 2025-10-22 09:28:58,184 | INFO     | monitor loop #430: job 0:6854663433 is in state 'finished'
[2025-10-22 05:30:10] 2025-10-22 09:28:58,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 05:30:10] 2025-10-22 09:28:59,047 | INFO     | time since job start (5764s) is within the limit (172800.0s)
[2025-10-22 05:30:10] 2025-10-22 09:29:00,687 | INFO     | monitor loop #431: job 0:6854663433 is in state 'finished'
[2025-10-22 05:30:10] 2025-10-22 09:29:00,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 05:30:10] 2025-10-22 09:29:01,052 | INFO     | time since job start (5766s) is within the limit (172800.0s)
[2025-10-22 05:30:10] 2025-10-22 09:29:02,989 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-22 05:30:10] 2025-10-22 09:29:02,993 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-22 05:30:10] 2025-10-22 09:29:02,995 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6854663433/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 05:30:10] 2025-10-22 09:29:02,996 | INFO     | extracted standard info from prmon json
[2025-10-22 05:30:10] 2025-10-22 09:29:02,996 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 05:30:10] 2025-10-22 09:29:02,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 05:30:10] 2025-10-22 09:29:02,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 05:30:10] 2025-10-22 09:29:02,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 05:30:10] 2025-10-22 09:29:02,999 | INFO     | fitting pss+swap vs Time
[2025-10-22 05:30:10] 2025-10-22 09:29:03,000 | INFO     | sum of square deviations: 204163828.0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,000 | INFO     | sum of deviations: -9712780144.0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,000 | INFO     | mean x: 1761122534.0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,000 | INFO     | mean y: 2540330.83908046
[2025-10-22 05:30:10] 2025-10-22 09:29:03,000 | INFO     | -- intersect: 83785236545.69534
[2025-10-22 05:30:10] 2025-10-22 09:29:03,001 | INFO     | intersect: 83785236545.69534
[2025-10-22 05:30:10] 2025-10-22 09:29:03,001 | INFO     | chi2: 0.09650822873927843
[2025-10-22 05:30:10] 2025-10-22 09:29:03,001 | INFO     | -- intersect: 83785236545.69534
[2025-10-22 05:30:10] 2025-10-22 09:29:03,001 | INFO     | current memory leak: -47.57 B/s (using 87 data points, chi2=0.10)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,001 | INFO     | could have reported an average CPU frequency of 1900 MHz (7 samples)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | ..............................
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . Timing measurements:
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . get job = 0 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . initial setup = 2 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . payload setup = 8 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . stage-in = 0 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . payload execution = 5728 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,002 | INFO     | . stage-out = 0 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,003 | INFO     | . log creation = 0 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,003 | INFO     | ..............................
[2025-10-22 05:30:10] 2025-10-22 09:29:03,063 | INFO     | time since job start (5768s) is within the limit (172800.0s)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,494 | INFO     | 
[2025-10-22 05:30:10] 2025-10-22 09:29:03,494 | INFO     | job summary report
[2025-10-22 05:30:10] 2025-10-22 09:29:03,495 | INFO     | --------------------------------------------------
[2025-10-22 05:30:10] 2025-10-22 09:29:03,495 | INFO     | PanDA job id: 6854663433
[2025-10-22 05:30:10] 2025-10-22 09:29:03,495 | INFO     | task id: 46809188
[2025-10-22 05:30:10] 2025-10-22 09:29:03,495 | INFO     | errors: (none)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | pilot state: finished 
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | transexitcode: 0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | exeerrorcode: 0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | exeerrordiag: 
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | exitcode: 0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | exitmsg: OK
[2025-10-22 05:30:10] 2025-10-22 09:29:03,496 | INFO     | cpuconsumptiontime: 41344 s
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | nevents: 400
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | neventsw: 0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | pid: 17855
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | pgrp: 17855
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | corecount: 8
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | event service: False
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | sizes: {0: 2348667, 1: 2348866, 6: 2349128, 12: 2349156, 5740: 2375784, 5741: 2384782, 5745: 2384966, 5751: 2385160}
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | --------------------------------------------------
[2025-10-22 05:30:10] 2025-10-22 09:29:03,497 | INFO     | 
[2025-10-22 05:30:10] 2025-10-22 09:29:03,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-22 05:30:10] 2025-10-22 09:29:03,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 05:30:10] 2025-10-22 09:29:03,532 | INFO     | job 6854663433 has completed (purged errors)
[2025-10-22 05:30:10] 2025-10-22 09:29:03,532 | INFO     | overall cleanup function is called
[2025-10-22 05:30:10] 2025-10-22 09:29:04,541 | INFO     | --- collectZombieJob: --- 10, [17855]
[2025-10-22 05:30:10] 2025-10-22 09:29:04,541 | INFO     | zombie collector waiting for pid 17855
[2025-10-22 05:30:10] 2025-10-22 09:29:04,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 05:30:10] 2025-10-22 09:29:04,541 | INFO     | collected zombie processes
[2025-10-22 05:30:10] 2025-10-22 09:29:04,542 | INFO     | will attempt to kill all subprocesses of pid=17855
[2025-10-22 05:30:10] 2025-10-22 09:29:04,629 | INFO     | process IDs to be killed: [17855] (in reverse order)
[2025-10-22 05:30:10] 2025-10-22 09:29:04,691 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 05:30:10] 2025-10-22 09:29:04,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 05:30:10] 2025-10-22 09:29:04,774 | INFO     | did not find any defunct processes belonging to 17855
[2025-10-22 05:30:10] 2025-10-22 09:29:04,777 | INFO     | did not find any defunct processes belonging to 17855
[2025-10-22 05:30:10] 2025-10-22 09:29:04,777 | INFO     | ready for new job
[2025-10-22 05:30:10] 2025-10-22 09:29:04,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 05:30:10] 2025-10-22 09:29:04,779 | INFO     | ***************************************
[2025-10-22 05:30:10] 2025-10-22 09:29:04,779 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 05:30:10] 2025-10-22 09:29:04,779 | INFO     | ***************************************
[2025-10-22 05:30:10] 2025-10-22 09:29:04,779 | INFO     | 
[2025-10-22 05:30:10] 2025-10-22 09:29:04,779 | INFO     | architecture information:
[2025-10-22 05:30:10] 2025-10-22 09:29:04,780 | INFO     | executing command: cat /etc/os-release
[2025-10-22 05:30:10] 2025-10-22 09:29:04,798 | INFO     | cat /etc/os-release:
[2025-10-22 05:30:10] NAME="CentOS Linux"
[2025-10-22 05:30:10] VERSION="7 (Core)"
[2025-10-22 05:30:10] ID="centos"
[2025-10-22 05:30:10] ID_LIKE="rhel fedora"
[2025-10-22 05:30:10] VERSION_ID="7"
[2025-10-22 05:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 05:30:10] ANSI_COLOR="0;31"
[2025-10-22 05:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 05:30:10] HOME_URL="https://www.centos.org/"
[2025-10-22 05:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 05:30:10] 
[2025-10-22 05:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 05:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 05:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 05:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 05:30:10] 
[2025-10-22 05:30:10] 2025-10-22 09:29:04,798 | INFO     | ***************************************
[2025-10-22 05:30:10] 2025-10-22 09:29:05,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-22 05:30:10] 2025-10-22 09:29:05,322 | INFO     | sufficient remaining disk space (18665701376 B)
[2025-10-22 05:30:10] 2025-10-22 09:29:05,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 05:30:10] 2025-10-22 09:29:05,322 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 05:30:10] 2025-10-22 09:29:05,323 | INFO     | update_server=False
[2025-10-22 05:30:10] 2025-10-22 09:29:05,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 05:30:10] 2025-10-22 09:29:05,694 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 05:30:10] 2025-10-22 09:29:05,694 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 05:30:10] 2025-10-22 09:29:05,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:30:10] 2025-10-22 09:29:05,695 | INFO     | will abort loop
[2025-10-22 05:30:10] 2025-10-22 09:29:05,801 | INFO     | all job control threads have been joined
[2025-10-22 05:30:10] 2025-10-22 09:29:06,062 | INFO     | all data control threads have been joined
[2025-10-22 05:30:10] 2025-10-22 09:29:06,150 | INFO     | all payload control threads have been joined
[2025-10-22 05:30:10] 2025-10-22 09:29:06,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 05:30:10] 2025-10-22 09:29:06,329 | INFO     | [job] retrieve thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:06,394 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:06,700 | INFO     | [job] job monitor thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:06,806 | INFO     | [job] control thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:06,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 05:30:10] 2025-10-22 09:29:07,002 | INFO     | [data] copytool_in thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,066 | INFO     | [data] control thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,156 | INFO     | [payload] control thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,405 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,501 | INFO     | [job] validate thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,514 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,619 | INFO     | [payload] failed_post thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:07,705 | INFO     | [payload] validate_post thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:08,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:30:10] 2025-10-22 09:29:08,215 | INFO     | [data] copytool_out thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:09,111 | INFO     | [job] queue monitor thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:10,968 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:15,526 | INFO     | job.realtimelogging is not enabled
[2025-10-22 05:30:10] 2025-10-22 09:29:16,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 05:30:10] 2025-10-22 09:29:36,265 | INFO     | PID=11355 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 05:30:10] 2025-10-22 09:29:36,266 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 05:30:10] 2025-10-22 09:29:36,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 05:30:10] 2025-10-22 09:29:36,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 05:30:10] 2025-10-22 09:30:03,695 | INFO     | [monitor] cgroup control has ended
[2025-10-22 05:30:10] 2025-10-22 09:30:04,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812043257664)>', '<ExcThread(monitor, started 139810647832320)>']
[2025-10-22 05:30:10] 2025-10-22 09:30:05,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 05:30:10] 2025-10-22 09:30:05,413 | INFO     | [monitor] control thread has ended
[2025-10-22 05:30:10] 2025-10-22 09:30:09,826 | INFO     | all workflow threads have been joined
[2025-10-22 05:30:10] 2025-10-22 09:30:09,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 05:30:10] 2025-10-22 09:30:09,828 | INFO     | traces error code: 0
[2025-10-22 05:30:10] 2025-10-22 09:30:09,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 05:30:10] 2025-10-22 09:30:09,944 [wrapper] ==== pilot stdout END ====
[2025-10-22 05:30:10] 2025-10-22 09:30:09,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 05:30:10] 2025-10-22 09:30:09,954 [wrapper] pilotpid: 11355
[2025-10-22 05:30:10] 2025-10-22 09:30:09,959 [wrapper] Pilot exit status: 0
[2025-10-22 05:30:10] 2025-10-22 09:30:09,978 [wrapper] pandaids: 6854663433
[2025-10-22 05:30:10] 2025-10-22 09:30:10,034 [wrapper] cleanup supervisor_pilot 19301 11356
[2025-10-22 05:30:10] 2025-10-22 09:30:10,039 [wrapper] Test setup, not cleaning
[2025-10-22 05:30:10] 2025-10-22 09:30:10,043 [wrapper] apfmon messages muted
[2025-10-22 05:30:10] 2025-10-22 09:30:10,047 [wrapper] ==== wrapper stdout END ====
[2025-10-22 05:30:10] 2025-10-22 09:30:10,052 [wrapper] ==== wrapper stderr END ====
[2025-10-22 05:30:10]  *** Error codes and diagnostics ***
[2025-10-22 05:30:10]     "exeErrorCode": 0,
[2025-10-22 05:30:10]     "exeErrorDiag": "",
[2025-10-22 05:30:10]     "pilotErrorCode": 0,
[2025-10-22 05:30:10]     "pilotErrorDiag": "",
[2025-10-22 05:30:10]  *** Listing of results directory ***
[2025-10-22 05:30:10] total 329396
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 22:23 queuedata.json
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 22:24 pilot3.tar.gz
[2025-10-22 05:30:10] -rwx------ 1 boincer umatlas     36292 Oct 21 22:26 runpilot2-wrapper.sh
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas       100 Oct 22 03:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 05:30:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 22 03:52 run_atlas
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas       105 Oct 22 03:52 job.xml
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas 191173284 Oct 22 03:52 EVNT.46809186._000245.pool.root.1
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 03:52 start_atlas.sh
[2025-10-22 05:30:10] drwxrwx--x 2 boincer umatlas      4096 Oct 22 03:52 shared
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas    569663 Oct 22 03:52 input.tar.gz
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas         0 Oct 22 03:52 boinc_lockfile
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas      2492 Oct 22 03:52 pandaJob.out
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas    978092 Oct 22 03:52 agis_schedconf.cvmfs.json
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas   1560740 Oct 22 03:52 agis_ddmendpoints.agis.ALL.json
[2025-10-22 05:30:10] drwx------ 5 boincer umatlas      4096 Oct 22 03:52 pilot3
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas 139891583 Oct 22 05:28 HITS.46809188._006407.pool.root.1
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas       529 Oct 22 05:28 boinc_task_state.xml
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas      1049 Oct 22 05:28 memory_monitor_summary.json
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas    341825 Oct 22 05:28 log.46809188._006407.job.log.tgz.1
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 22 05:28 init_data.xml
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas      7845 Oct 22 05:29 heartbeat.json
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas        95 Oct 22 05:29 pilot_heartbeat.json
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas        27 Oct 22 05:29 wrapper_checkpoint.txt
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 22 05:29 boinc_mmap_file
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas      5004 Oct 22 05:30 pilotlog.txt
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas    823372 Oct 22 05:30 log.46809188._006407.job.log.1
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas       357 Oct 22 05:30 output.list
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas       620 Oct 22 05:30 runtime_log
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas   1187840 Oct 22 05:30 result.tar.gz
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 22 05:30 runtime_log.err
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas       658 Oct 22 05:30 3iaLDmZjdV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXR4NDmS46tun.diag
[2025-10-22 05:30:10] -rw-r--r-- 1 boincer umatlas     22335 Oct 22 05:30 stderr.txt
[2025-10-22 05:30:10] HITS file was successfully produced:
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas 139891583 Oct 22 05:28 shared/HITS.pool.root.1
[2025-10-22 05:30:10]  *** Contents of shared directory: ***
[2025-10-22 05:30:10] total 325048
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas 191173284 Oct 22 03:52 ATLAS.root_0
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 03:52 start_atlas.sh
[2025-10-22 05:30:10] -rw-r--r-- 2 boincer umatlas    569663 Oct 22 03:52 input.tar.gz
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas 139891583 Oct 22 05:28 HITS.pool.root.1
[2025-10-22 05:30:10] -rw------- 1 boincer umatlas   1187840 Oct 22 05:30 result.tar.gz
05:30:11 (6598): run_atlas exited; CPU time 41298.944124
05:30:11 (6598): called boinc_finish(0)

</stderr_txt>
]]>

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