Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:52 (3165211): wrapper (7.7.26015): starting
00:46:52 (3165211): wrapper: running run_atlas (--nthreads 12)
[2025-10-22 00:46:52] Arguments: --nthreads 12
[2025-10-22 00:46:52] Threads: 12
[2025-10-22 00:46:52] Checking for CVMFS
[2025-10-22 00:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 00:46:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 00:46:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 00:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 00:46:52] 2.11.5.0 2129 46295 211820 151985 2 452 35686452 45568001 8172 130560 0 496280412 99.853 225884380 25324 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-22 00:46:52] CVMFS is ok
[2025-10-22 00:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 00:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 00:46:52] Further information can be found at the LHC@home message board.
[2025-10-22 00:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 00:46:52] Checking for apptainer binary...
[2025-10-22 00:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 00:46:52] Running /usr/bin/apptainer --version
[2025-10-22 00:46:52] apptainer version 1.4.1-1.el9
[2025-10-22 00:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 00:46:52] wns0037.triumf.lcg
[2025-10-22 00:46:52] apptainer works
[2025-10-22 00:46:52] Set ATHENA_PROC_NUMBER=12
[2025-10-22 00:46:52] Set ATHENA_CORE_NUMBER=12
[2025-10-22 00:46:52] Starting ATLAS job with PandaID=6853278752
[2025-10-22 00:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 00:50:08]  *** The last 200 lines of the pilot log: ***
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | found no stored workdir sizes
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | wrong length of table data, x=[1761119245.0], y=[910.0] (must be same and length>=4)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | could have reported an average CPU frequency of 2366 MHz (4 samples)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . Timing measurements:
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . get job = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . initial setup = 2 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload setup = 4 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-in = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload execution = 14 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-out = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . log creation = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853278752/pilotlog.txt
[2025-10-22 00:50:08] 2025-10-22 07:49:39,822 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-22 00:50:08] - Log from pilotlog.txt -
[2025-10-22 00:50:08] 2025-10-22 07:49:39,808 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 00:50:08] 2025-10-22 07:49:39,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | found no stored workdir sizes
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | wrong length of table data, x=[1761119245.0], y=[910.0] (must be same and length>=4)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | could have reported an average CPU frequency of 2366 MHz (4 samples)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . Timing measurements:
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . get job = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . initial setup = 2 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload setup = 4 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-in = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload execution = 14 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-out = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . log creation = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853278752/pilotlog.txt
[2025-10-22 00:50:08] 2025-10-22 07:49:39,822 | WARNING  | 
[2025-10-22 00:50:08] [begin log extracts]
[2025-10-22 00:50:08] - Log from pilotlog.txt -
[2025-10-22 00:50:08] 2025-10-22 07:49:39,808 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 00:50:08] 2025-10-22 07:49:39,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | found no stored workdir sizes
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | INFO     | will not add max space = 0 B to job metrics
[2025-10-22 00:50:08] 2025-10-22 07:49:39,809 | WARNING  | wrong length of table data, x=[1761119245.0], y=[910.0] (must be same and length>=4)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | could have reported an average CPU frequency of 2366 MHz (4 samples)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . Timing measurements:
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . get job = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . initial setup = 2 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload setup = 4 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-in = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . payload execution = 14 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . stage-out = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | . log creation = 0 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | ..............................
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-22 00:50:08] 2025-10-22 07:49:39,810 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853278752/pilotlog.txt
[2025-10-22 00:50:08] [end log extracts]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,822 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,823 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | 
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | job summary report
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | --------------------------------------------------
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | PanDA job id: 6853278752
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | task id: 46771637
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-22 00:47:32,222 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 00:50:08] 2025-10-22 07:49:39,884 | INFO     | pilot state: failed 
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | transexitcode: 65
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | exeerrorcode: 65
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | exitcode: 65
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | cpuconsumptiontime: 17 s
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | nevents: 0
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | neventsw: 0
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | pid: 3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | pgrp: 3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | corecount: 12
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | event service: False
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | sizes: {0: 2348928, 4: 2349190, 11: 2349218, 23: 2372364, 24: 2376656, 25: 2376684, 144: 2376978}
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | --------------------------------------------------
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | 
[2025-10-22 00:50:08] 2025-10-22 07:49:39,885 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | job 6853278752 has completed (purged errors)
[2025-10-22 00:50:08] 2025-10-22 07:49:39,902 | INFO     | overall cleanup function is called
[2025-10-22 00:50:08] 2025-10-22 07:49:40,908 | INFO     | --- collectZombieJob: --- 10, [3175338]
[2025-10-22 00:50:08] 2025-10-22 07:49:40,908 | INFO     | zombie collector waiting for pid 3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:40,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 00:50:08] 2025-10-22 07:49:40,908 | INFO     | collected zombie processes
[2025-10-22 00:50:08] 2025-10-22 07:49:40,908 | INFO     | will attempt to kill all subprocesses of pid=3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:41,026 | INFO     | process IDs to be killed: [3175338] (in reverse order)
[2025-10-22 00:50:08] 2025-10-22 07:49:41,074 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 00:50:08] 2025-10-22 07:49:41,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 00:50:08] 2025-10-22 07:49:41,080 | INFO     | did not find any defunct processes belonging to 3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:41,085 | INFO     | did not find any defunct processes belonging to 3175338
[2025-10-22 00:50:08] 2025-10-22 07:49:41,085 | INFO     | ready for new job
[2025-10-22 00:50:08] 2025-10-22 07:49:41,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 00:50:08] 2025-10-22 07:49:41,086 | INFO     | ***************************************
[2025-10-22 00:50:08] 2025-10-22 07:49:41,087 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 00:50:08] 2025-10-22 07:49:41,087 | INFO     | ***************************************
[2025-10-22 00:50:08] 2025-10-22 07:49:41,087 | INFO     | 
[2025-10-22 00:50:08] 2025-10-22 07:49:41,088 | INFO     | architecture information:
[2025-10-22 00:50:08] 2025-10-22 07:49:41,089 | INFO     | executing command: cat /etc/os-release
[2025-10-22 00:50:08] 2025-10-22 07:49:41,099 | INFO     | cat /etc/os-release:
[2025-10-22 00:50:08] NAME="CentOS Linux"
[2025-10-22 00:50:08] VERSION="7 (Core)"
[2025-10-22 00:50:08] ID="centos"
[2025-10-22 00:50:08] ID_LIKE="rhel fedora"
[2025-10-22 00:50:08] VERSION_ID="7"
[2025-10-22 00:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 00:50:08] ANSI_COLOR="0;31"
[2025-10-22 00:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 00:50:08] HOME_URL="https://www.centos.org/"
[2025-10-22 00:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 00:50:08] 
[2025-10-22 00:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 00:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 00:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 00:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 00:50:08] 
[2025-10-22 00:50:08] 2025-10-22 07:49:41,100 | INFO     | ***************************************
[2025-10-22 00:50:08] 2025-10-22 07:49:41,602 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-22 00:50:08] 2025-10-22 07:49:41,614 | INFO     | sufficient remaining disk space (2057691987968 B)
[2025-10-22 00:50:08] 2025-10-22 07:49:41,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 00:50:08] 2025-10-22 07:49:41,615 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 00:50:08] 2025-10-22 07:49:41,615 | INFO     | update_server=False
[2025-10-22 00:50:08] 2025-10-22 07:49:41,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 00:50:08] 2025-10-22 07:49:41,615 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-22 00:50:08] 2025-10-22 07:49:41,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 00:50:08] 2025-10-22 07:49:41,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:50:08] 2025-10-22 07:49:41,616 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 00:50:08] 2025-10-22 07:49:41,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 00:50:08] 2025-10-22 07:49:41,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 00:50:08] 2025-10-22 07:49:41,727 | INFO     | all job control threads have been joined
[2025-10-22 00:50:08] 2025-10-22 07:49:42,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:50:08] 2025-10-22 07:49:42,043 | INFO     | aborting loop
[2025-10-22 00:50:08] 2025-10-22 07:49:42,460 | INFO     | all payload control threads have been joined
[2025-10-22 00:50:08] 2025-10-22 07:49:42,525 | INFO     | all data control threads have been joined
[2025-10-22 00:50:08] 2025-10-22 07:49:42,616 | INFO     | [job] retrieve thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:42,621 | INFO     | [job] queue monitor thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:42,733 | INFO     | [job] control thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,030 | INFO     | [data] copytool_in thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,048 | INFO     | [job] job monitor thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,200 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,461 | INFO     | [payload] failed_post thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,465 | INFO     | [payload] control thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,530 | INFO     | [data] control thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,620 | INFO     | [data] copytool_out thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,665 | INFO     | [job] validate thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 00:50:08] 2025-10-22 07:49:43,805 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,908 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:43,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:44,110 | INFO     | [payload] validate_post thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:49:47,695 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 00:50:08] 2025-10-22 07:50:01,503 | INFO     | [monitor] cgroup control has ended
[2025-10-22 00:50:08] 2025-10-22 07:50:03,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200855189312)>', '<ExcThread(monitor, started 140200315434752)>']
[2025-10-22 00:50:08] 2025-10-22 07:50:03,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 00:50:08] 2025-10-22 07:50:03,715 | INFO     | [monitor] control thread has ended
[2025-10-22 00:50:08] 2025-10-22 07:50:08,169 | INFO     | all workflow threads have been joined
[2025-10-22 00:50:08] 2025-10-22 07:50:08,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 00:50:08] 2025-10-22 07:50:08,169 | INFO     | traces error code: 0
[2025-10-22 00:50:08] 2025-10-22 07:50:08,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 00:50:08] 2025-10-22 07:50:08,321 [wrapper] ==== pilot stdout END ====
[2025-10-22 00:50:08] 2025-10-22 07:50:08,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 00:50:08] 2025-10-22 07:50:08,325 [wrapper] pilotpid: 3168841
[2025-10-22 00:50:08] 2025-10-22 07:50:08,328 [wrapper] Pilot exit status: 0
[2025-10-22 00:50:08] 2025-10-22 07:50:08,335 [wrapper] pandaids: 6853278752
[2025-10-22 00:50:08] 2025-10-22 07:50:08,368 [wrapper] cleanup supervisor_pilot 3168847 3168842
[2025-10-22 00:50:08] 2025-10-22 07:50:08,370 [wrapper] Test setup, not cleaning
[2025-10-22 00:50:08] 2025-10-22 07:50:08,372 [wrapper] apfmon messages muted
[2025-10-22 00:50:08] 2025-10-22 07:50:08,374 [wrapper] ==== wrapper stdout END ====
[2025-10-22 00:50:08] 2025-10-22 07:50:08,376 [wrapper] ==== wrapper stderr END ====
[2025-10-22 00:50:08]  *** Error codes and diagnostics ***
[2025-10-22 00:50:08]     "exeErrorCode": 65,
[2025-10-22 00:50:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 00:50:08]     "pilotErrorCode": 1305,
[2025-10-22 00:50:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-22 00:50:08]  *** Listing of results directory ***
[2025-10-22 00:50:08] total 227956
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc    557409 Oct 21 21:26 pilot3.tar.gz
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc      5112 Oct 21 21:43 queuedata.json
[2025-10-22 00:50:08] -rwx------. 1 boinc boinc     36292 Oct 21 21:46 runpilot2-wrapper.sh
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc       100 Oct 22 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 00:50:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 00:46 run_atlas
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc       105 Oct 22 00:46 job.xml
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc      6594 Oct 22 00:46 init_data.xml
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc 229318559 Oct 22 00:46 EVNT.46771634._003239.pool.root.1
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc     15120 Oct 22 00:46 start_atlas.sh
[2025-10-22 00:50:08] drwxrwx--x. 2 boinc boinc      4096 Oct 22 00:46 shared
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc    569677 Oct 22 00:46 input.tar.gz
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc         0 Oct 22 00:46 boinc_lockfile
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc      2560 Oct 22 00:46 pandaJob.out
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc    978464 Oct 22 00:46 agis_schedconf.cvmfs.json
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc   1560740 Oct 22 00:47 agis_ddmendpoints.agis.ALL.json
[2025-10-22 00:50:08] drwx------. 5 boinc boinc      4096 Oct 22 00:47 pilot3
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc       521 Oct 22 00:47 boinc_task_state.xml
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc       957 Oct 22 00:47 memory_monitor_summary.json
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc     20918 Oct 22 00:47 log.46771637._081031.job.log.tgz.1
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc        95 Oct 22 00:49 pilot_heartbeat.json
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc      8380 Oct 22 00:49 heartbeat.json
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc      8192 Oct 22 00:50 boinc_mmap_file
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc        22 Oct 22 00:50 wrapper_checkpoint.txt
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc      4551 Oct 22 00:50 pilotlog.txt
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc     81347 Oct 22 00:50 log.46771637._081031.job.log.1
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc       188 Oct 22 00:50 output.list
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc       620 Oct 22 00:50 runtime_log
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc    122880 Oct 22 00:50 result.tar.gz
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc      8528 Oct 22 00:50 runtime_log.err
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc       644 Oct 22 00:50 JdHMDmRvfV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmb0gMDmtIa97n.diag
[2025-10-22 00:50:08] -rw-r--r--. 1 boinc boinc     21555 Oct 22 00:50 stderr.txt
[2025-10-22 00:50:08] No HITS result produced
[2025-10-22 00:50:08]  *** Contents of shared directory: ***
[2025-10-22 00:50:08] total 224644
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc 229318559 Oct 22 00:46 ATLAS.root_0
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc     15120 Oct 22 00:46 start_atlas.sh
[2025-10-22 00:50:08] -rw-r--r--. 2 boinc boinc    569677 Oct 22 00:46 input.tar.gz
[2025-10-22 00:50:08] -rw-------. 1 boinc boinc    122880 Oct 22 00:50 result.tar.gz
00:50:10 (3165211): run_atlas exited; CPU time 21.157990
00:50:10 (3165211): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN