Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:29 (27800): wrapper (7.7.26015): starting
19:16:29 (27800): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 19:16:29] Arguments: --nthreads 8
[2025-10-22 19:16:29] Threads: 8
[2025-10-22 19:16:29] Checking for CVMFS
[2025-10-22 19:16:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 19:16:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 19:16:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 19:16:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 19:16:30] 2.11.2.0 9407 235084 139152 152003 1 197 18878481 25165824 4007 130560 0 108406062 99.865 65983924 2994 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-22 19:16:30] CVMFS is ok
[2025-10-22 19:16:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 19:16:30] Checking for apptainer binary...
[2025-10-22 19:16:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 19:16:30] Running /usr/bin/apptainer --version
[2025-10-22 19:16:30] apptainer version 1.3.2-1.el7
[2025-10-22 19:16:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 19:16:32] cg-vwn416.simple-grid.lan
[2025-10-22 19:16:32] apptainer works
[2025-10-22 19:16:32] Set ATHENA_PROC_NUMBER=8
[2025-10-22 19:16:32] Set ATHENA_CORE_NUMBER=8
[2025-10-22 19:16:32] Starting ATLAS job with PandaID=6853250977
[2025-10-22 19:16:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 23:56:44]  *** The last 200 lines of the pilot log: ***
[2025-10-22 23:56:44] 2025-10-22 21:55:36,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,187 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 23:56:44] 2025-10-22 21:55:37,188 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-22 23:56:44] 2025-10-22 21:55:37,190 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6853250977/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,191 | INFO     | extracted standard info from prmon json
[2025-10-22 23:56:44] 2025-10-22 21:55:37,191 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 23:56:44] 2025-10-22 21:55:37,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 23:56:44] 2025-10-22 21:55:37,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 23:56:44] 2025-10-22 21:55:37,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 23:56:44] 2025-10-22 21:55:37,198 | INFO     | fitting pss+swap vs Time
[2025-10-22 23:56:44] 2025-10-22 21:55:37,205 | INFO     | sum of square deviations: 6171352920.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,207 | INFO     | sum of deviations: 676460902.9999924
[2025-10-22 23:56:44] 2025-10-22 21:55:37,208 | INFO     | mean x: 1761161765.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,208 | INFO     | mean y: 2496897.062730627
[2025-10-22 23:56:44] 2025-10-22 21:55:37,208 | INFO     | -- intersect: -190549440.31655514
[2025-10-22 23:56:44] 2025-10-22 21:55:37,208 | INFO     | intersect: -190549440.31655514
[2025-10-22 23:56:44] 2025-10-22 21:55:37,208 | INFO     | chi2: 4.101654676681127
[2025-10-22 23:56:44] 2025-10-22 21:55:37,209 | INFO     | sum of square deviations: 5836025702.5
[2025-10-22 23:56:44] 2025-10-22 21:55:37,212 | INFO     | sum of deviations: 18803403537.00001
[2025-10-22 23:56:44] 2025-10-22 21:55:37,212 | INFO     | mean x: 1761161612.5
[2025-10-22 23:56:44] 2025-10-22 21:55:37,212 | INFO     | mean y: 2505018.917293233
[2025-10-22 23:56:44] 2025-10-22 21:55:37,212 | INFO     | -- intersect: -5671875832.339957
[2025-10-22 23:56:44] 2025-10-22 21:55:37,212 | INFO     | intersect: -5671875832.339957
[2025-10-22 23:56:44] 2025-10-22 21:55:37,213 | INFO     | chi2: 3.353943465500637
[2025-10-22 23:56:44] 2025-10-22 21:55:37,213 | INFO     | current chi2=3.353943465500637 (change=18.22950175282684 %)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,213 | INFO     | right removable region: 265
[2025-10-22 23:56:44] 2025-10-22 21:55:37,214 | INFO     | sum of square deviations: 5836025702.5
[2025-10-22 23:56:44] 2025-10-22 21:55:37,216 | INFO     | sum of deviations: -74438929154.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,216 | INFO     | mean x: 1761161917.5
[2025-10-22 23:56:44] 2025-10-22 21:55:37,216 | INFO     | mean y: 2530968.4360902254
[2025-10-22 23:56:44] 2025-10-22 21:55:37,216 | INFO     | -- intersect: 22466278369.230762
[2025-10-22 23:56:44] 2025-10-22 21:55:37,217 | INFO     | intersect: 22466278369.230762
[2025-10-22 23:56:44] 2025-10-22 21:55:37,217 | INFO     | chi2: 1.094097416328276
[2025-10-22 23:56:44] 2025-10-22 21:55:37,217 | INFO     | current chi2=1.094097416328276 (change=73.3254624640032 %)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,218 | INFO     | sum of square deviations: 5513070810.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,238 | INFO     | sum of deviations: -80029463498.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,239 | INFO     | mean x: 1761162070.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,239 | INFO     | mean y: 2533553.950191571
[2025-10-22 23:56:44] 2025-10-22 21:55:37,239 | INFO     | -- intersect: 25568114053.92696
[2025-10-22 23:56:44] 2025-10-22 21:55:37,239 | INFO     | intersect: 25568114053.92696
[2025-10-22 23:56:44] 2025-10-22 21:55:37,239 | INFO     | chi2: 1.0004676867235585
[2025-10-22 23:56:44] 2025-10-22 21:55:37,240 | INFO     | current chi2=1.0004676867235585 (change=8.557714167622581 %)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,240 | INFO     | left removable region: 20
[2025-10-22 23:56:44] 2025-10-22 21:55:37,240 | INFO     | sum of square deviations: 4560048290.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,242 | INFO     | sum of deviations: -46332817240.99999
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | mean x: 1761162192.0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | mean y: 2535227.775510204
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | -- intersect: 17896996159.831768
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | intersect: 17896996159.831768
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | chi2: 0.19742885918195419
[2025-10-22 23:56:44] 2025-10-22 21:55:37,243 | INFO     | -- intersect: 17896996159.831768
[2025-10-22 23:56:44] 2025-10-22 21:55:37,244 | INFO     | current memory leak: -10.16 B/s (using 245 data points, chi2=0.20)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,244 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | ..............................
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . Timing measurements:
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . get job = 0 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . initial setup = 2 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . payload setup = 15 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . stage-in = 0 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . payload execution = 16556 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . stage-out = 3 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | . log creation = 1 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,245 | INFO     | ..............................
[2025-10-22 23:56:44] 2025-10-22 21:55:37,400 | INFO     | 
[2025-10-22 23:56:44] 2025-10-22 21:55:37,400 | INFO     | job summary report
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | --------------------------------------------------
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | PanDA job id: 6853250977
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | task id: 46771637
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | errors: (none)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | pilot state: finished 
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | transexitcode: 0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | exeerrorcode: 0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | exeerrordiag: 
[2025-10-22 23:56:44] 2025-10-22 21:55:37,401 | INFO     | exitcode: 0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | exitmsg: OK
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | cpuconsumptiontime: 62830 s
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | nevents: 400
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | neventsw: 0
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | pid: 15385
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | pgrp: 15385
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | corecount: 8
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | event service: False
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | sizes: {0: 2348760, 1: 2348959, 12: 2348959, 13: 2349249, 23: 2349305, 16576: 2380685, 16579: 2389683, 16583: 2389739, 16678: 2389933}
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | --------------------------------------------------
[2025-10-22 23:56:44] 2025-10-22 21:55:37,402 | INFO     | 
[2025-10-22 23:56:44] 2025-10-22 21:55:37,403 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-22 23:56:44] 2025-10-22 21:55:37,665 | INFO     | time since job start (16711s) is within the limit (172800.0s)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 23:56:44] 2025-10-22 21:55:37,710 | INFO     | job 6853250977 has completed (purged errors)
[2025-10-22 23:56:44] 2025-10-22 21:55:37,710 | INFO     | overall cleanup function is called
[2025-10-22 23:56:44] 2025-10-22 21:55:38,719 | INFO     | --- collectZombieJob: --- 10, [15385]
[2025-10-22 23:56:44] 2025-10-22 21:55:38,719 | INFO     | zombie collector waiting for pid 15385
[2025-10-22 23:56:44] 2025-10-22 21:55:38,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 23:56:44] 2025-10-22 21:55:38,720 | INFO     | collected zombie processes
[2025-10-22 23:56:44] 2025-10-22 21:55:38,720 | INFO     | will attempt to kill all subprocesses of pid=15385
[2025-10-22 23:56:44] 2025-10-22 21:55:38,828 | INFO     | process IDs to be killed: [15385] (in reverse order)
[2025-10-22 23:56:44] 2025-10-22 21:55:39,676 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 23:56:44] 2025-10-22 21:55:39,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 23:56:44] 2025-10-22 21:55:39,680 | INFO     | did not find any defunct processes belonging to 15385
[2025-10-22 23:56:44] 2025-10-22 21:55:39,683 | INFO     | did not find any defunct processes belonging to 15385
[2025-10-22 23:56:44] 2025-10-22 21:55:39,683 | INFO     | ready for new job
[2025-10-22 23:56:44] 2025-10-22 21:55:39,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 23:56:44] 2025-10-22 21:55:39,686 | INFO     | ***************************************
[2025-10-22 23:56:44] 2025-10-22 21:55:39,686 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 23:56:44] 2025-10-22 21:55:39,686 | INFO     | ***************************************
[2025-10-22 23:56:44] 2025-10-22 21:55:39,686 | INFO     | 
[2025-10-22 23:56:44] 2025-10-22 21:55:39,687 | INFO     | pilot is running in a VM
[2025-10-22 23:56:44] 2025-10-22 21:55:39,687 | INFO     | architecture information:
[2025-10-22 23:56:44] 2025-10-22 21:55:39,693 | INFO     | executing command: cat /etc/os-release
[2025-10-22 23:56:44] 2025-10-22 21:55:39,812 | INFO     | cat /etc/os-release:
[2025-10-22 23:56:44] NAME="CentOS Linux"
[2025-10-22 23:56:44] VERSION="7 (Core)"
[2025-10-22 23:56:44] ID="centos"
[2025-10-22 23:56:44] ID_LIKE="rhel fedora"
[2025-10-22 23:56:44] VERSION_ID="7"
[2025-10-22 23:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 23:56:44] ANSI_COLOR="0;31"
[2025-10-22 23:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 23:56:44] HOME_URL="https://www.centos.org/"
[2025-10-22 23:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 23:56:44] 
[2025-10-22 23:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 23:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 23:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 23:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 23:56:44] 
[2025-10-22 23:56:44] 2025-10-22 21:55:39,812 | INFO     | ***************************************
[2025-10-22 23:56:44] 2025-10-22 21:55:40,315 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-22 23:56:44] 2025-10-22 21:55:40,599 | INFO     | sufficient remaining disk space (496615030784 B)
[2025-10-22 23:56:44] 2025-10-22 21:55:40,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 23:56:44] 2025-10-22 21:55:40,599 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 23:56:44] 2025-10-22 21:55:40,600 | INFO     | update_server=False
[2025-10-22 23:56:44] 2025-10-22 21:55:40,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 23:56:44] 2025-10-22 21:55:40,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 23:56:44] 2025-10-22 21:55:40,601 | INFO     | aborting loop
[2025-10-22 23:56:44] 2025-10-22 21:55:41,294 | INFO     | all payload control threads have been joined
[2025-10-22 23:56:44] 2025-10-22 21:55:41,439 | INFO     | all job control threads have been joined
[2025-10-22 23:56:44] 2025-10-22 21:55:41,559 | INFO     | all data control threads have been joined
[2025-10-22 23:56:44] 2025-10-22 21:55:41,605 | INFO     | [job] retrieve thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:41,606 | INFO     | [job] job monitor thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:41,636 | INFO     | [job] validate thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:41,993 | INFO     | [data] copytool_in thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:41,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 23:56:44] 2025-10-22 21:55:42,095 | INFO     | [payload] validate_post thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,123 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,299 | INFO     | [payload] control thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 23:56:44] 2025-10-22 21:55:42,445 | INFO     | [job] control thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,565 | INFO     | [data] control thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,621 | INFO     | [payload] failed_post thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:42,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 23:56:44] 2025-10-22 21:55:42,831 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:43,424 | INFO     | [job] queue monitor thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:44,005 | INFO     | [data] copytool_out thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:55:46,838 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 23:56:44] 2025-10-22 21:56:10,847 | INFO     | PID=1835 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-22 23:56:44] 2025-10-22 21:56:10,848 | INFO     | .. there are 9 such processes running
[2025-10-22 23:56:44] 2025-10-22 21:56:10,849 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 23:56:44] 2025-10-22 21:56:10,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 23:56:44] 2025-10-22 21:56:10,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 23:56:44] 2025-10-22 21:56:34,538 | INFO     | [monitor] cgroup control has ended
[2025-10-22 23:56:44] 2025-10-22 21:56:35,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710253860672)>', '<ExcThread(monitor, started 139709799962368)>']
[2025-10-22 23:56:44] 2025-10-22 21:56:35,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 23:56:44] 2025-10-22 21:56:35,997 | INFO     | [monitor] control thread has ended
[2025-10-22 23:56:44] 2025-10-22 21:56:40,392 | INFO     | all workflow threads have been joined
[2025-10-22 23:56:44] 2025-10-22 21:56:40,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 23:56:44] 2025-10-22 21:56:40,393 | INFO     | traces error code: 0
[2025-10-22 23:56:44] 2025-10-22 21:56:40,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 23:56:44] 2025-10-22 21:56:40,830 [wrapper] ==== pilot stdout END ====
[2025-10-22 23:56:44] 2025-10-22 21:56:40,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 23:56:44] 2025-10-22 21:56:41,056 [wrapper] pilotpid: 1835
[2025-10-22 23:56:44] 2025-10-22 21:56:41,171 [wrapper] Pilot exit status: 0
[2025-10-22 23:56:44] 2025-10-22 21:56:41,745 [wrapper] pandaids: 6853250977
[2025-10-22 23:56:44] 2025-10-22 21:56:42,649 [wrapper] cleanup supervisor_pilot 11979 1836
[2025-10-22 23:56:44] 2025-10-22 21:56:42,744 [wrapper] Test setup, not cleaning
[2025-10-22 23:56:44] 2025-10-22 21:56:42,869 [wrapper] apfmon messages muted
[2025-10-22 23:56:44] 2025-10-22 21:56:42,939 [wrapper] ==== wrapper stdout END ====
[2025-10-22 23:56:44] 2025-10-22 21:56:43,065 [wrapper] ==== wrapper stderr END ====
[2025-10-22 23:56:44]  *** Error codes and diagnostics ***
[2025-10-22 23:56:44]     "exeErrorCode": 0,
[2025-10-22 23:56:44]     "exeErrorDiag": "",
[2025-10-22 23:56:44]     "pilotErrorCode": 0,
[2025-10-22 23:56:44]     "pilotErrorDiag": "",
[2025-10-22 23:56:44]  *** Listing of results directory ***
[2025-10-22 23:56:44] total 438224
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc    557409 Oct 22 02:25 pilot3.tar.gz
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc      5112 Oct 22 02:53 queuedata.json
[2025-10-22 23:56:44] -rwx------. 1 boinc boinc     36292 Oct 22 02:57 runpilot2-wrapper.sh
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc       100 Oct 22 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 23:56:44] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 19:16 run_atlas
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc       105 Oct 22 19:16 job.xml
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc      6390 Oct 22 19:16 init_data.xml
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc 230110935 Oct 22 19:16 EVNT.46771634._003108.pool.root.1
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc     15120 Oct 22 19:16 start_atlas.sh
[2025-10-22 23:56:44] drwxrwx--x. 2 boinc boinc        68 Oct 22 19:16 shared
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc    569683 Oct 22 19:16 input.tar.gz
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc         0 Oct 22 19:16 boinc_lockfile
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc      2560 Oct 22 19:16 pandaJob.out
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc    978039 Oct 22 19:17 agis_schedconf.cvmfs.json
[2025-10-22 23:56:44] drwx------. 5 boinc boinc      4096 Oct 22 19:17 pilot3
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc 209290431 Oct 22 23:52 HITS.46771637._077953.pool.root.1
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc       531 Oct 22 23:53 boinc_task_state.xml
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc      1018 Oct 22 23:53 memory_monitor_summary.json
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc   1560740 Oct 22 23:53 agis_ddmendpoints.agis.ALL.json
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc    482440 Oct 22 23:53 log.46771637._077953.job.log.tgz.1
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc      7785 Oct 22 23:55 heartbeat.json
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc        95 Oct 22 23:56 pilot_heartbeat.json
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc        28 Oct 22 23:56 wrapper_checkpoint.txt
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc      8192 Oct 22 23:56 boinc_mmap_file
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc      4883 Oct 22 23:56 pilotlog.txt
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc   2244357 Oct 22 23:56 log.46771637._077953.job.log.1
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc       357 Oct 22 23:56 output.list
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc       620 Oct 22 23:56 runtime_log
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc   2744320 Oct 22 23:56 result.tar.gz
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc      8703 Oct 22 23:56 runtime_log.err
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc       656 Oct 22 23:56 07XMDmxLcV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmE4NDmp1mkBo.diag
[2025-10-22 23:56:44] -rw-r--r--. 1 boinc boinc     20778 Oct 22 23:56 stderr.txt
[2025-10-22 23:56:44] HITS file was successfully produced:
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc 209290431 Oct 22 23:52 shared/HITS.pool.root.1
[2025-10-22 23:56:44]  *** Contents of shared directory: ***
[2025-10-22 23:56:44] total 432364
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc 230110935 Oct 22 19:16 ATLAS.root_0
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc     15120 Oct 22 19:16 start_atlas.sh
[2025-10-22 23:56:44] -rw-r--r--. 2 boinc boinc    569683 Oct 22 19:16 input.tar.gz
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc 209290431 Oct 22 23:52 HITS.pool.root.1
[2025-10-22 23:56:44] -rw-------. 1 boinc boinc   2744320 Oct 22 23:56 result.tar.gz
23:56:46 (27800): run_atlas exited; CPU time 63058.770079
23:56:46 (27800): called boinc_finish(0)

</stderr_txt>
]]>

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