Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 01:49:59 (7952): vboxwrapper version 26210
2025-10-22 01:49:59 (7952): BOINC client version: 8.0.4
2025-10-22 01:49:59 (7952): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-10-22 01:49:59 (7952): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 01:50:00 (7952): Create VM. (boinc_7cb010db63abbc1a, slot#4)
2025-10-22 01:50:00 (7952): Setting Memory Size for VM. (4400MB)
2025-10-22 01:50:00 (7952): Setting CPU Count for VM. (4)
2025-10-22 01:50:01 (7952): Setting Chipset Options for VM.
2025-10-22 01:50:01 (7952): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 01:50:01 (7952): Setting Boot Options for VM.
2025-10-22 01:50:02 (7952): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 01:50:02 (7952): Enabling VM Network Access.
2025-10-22 01:50:02 (7952): Disabling USB Support for VM.
2025-10-22 01:50:03 (7952): Disabling COM Port Support for VM.
2025-10-22 01:50:03 (7952): Disabling LPT Port Support for VM.
2025-10-22 01:50:03 (7952): Disabling Audio Support for VM.
2025-10-22 01:50:03 (7952): Disabling Clipboard Support for VM.
2025-10-22 01:50:04 (7952): Disabling Drag and Drop Support for VM.
2025-10-22 01:50:04 (7952): Adding storage controller(s) to VM.
2025-10-22 01:50:04 (7952): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 01:50:05 (7952): Adding VirtualBox Guest Additions to VM.
2025-10-22 01:50:05 (7952): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 01:50:05 (7952): forwarding host port 51953 to guest port 80
2025-10-22 01:50:05 (7952): Enabling remote desktop for VM.
2025-10-22 01:50:06 (7952): Required extension pack not installed, remote desktop not enabled.
2025-10-22 01:50:06 (7952): Enabling shared directory for VM.
2025-10-22 01:50:06 (7952): Starting VM using VBoxManage interface. (boinc_7cb010db63abbc1a, slot#4)
2025-10-22 01:50:11 (7952): Successfully started VM. (PID = '15404')
2025-10-22 01:50:11 (7952): Reporting VM Process ID to BOINC.
2025-10-22 01:50:11 (7952): Guest Log: BIOS: VirtualBox 7.0.24
2025-10-22 01:50:11 (7952): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 01:50:11 (7952): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 01:50:11 (7952): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 01:50:11 (7952): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 01:50:11 (7952): Detected: Web Application Enabled (http://localhost:51953)
2025-10-22 01:50:11 (7952): Preference change detected
2025-10-22 01:50:11 (7952): Setting CPU throttle for VM. (100%)
2025-10-22 01:50:11 (7952): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 01:50:13 (7952): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 01:50:13 (7952): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 01:50:16 (7952): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 01:50:16 (7952): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 01:50:16 (7952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 01:50:21 (7952): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 01:50:21 (7952): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 01:50:29 (7952): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000186 main     Log opened 2025-10-22T01:50:26.811653000Z
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000295 main     OS Product: Linux
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000331 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000394 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000425 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000426 main     Process ID: 1305
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.000426 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 01:50:29 (7952): Guest Log: 00:00:00.003003 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 01:50:29 (7952): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 01:50:29 (7952): Guest Log: [INFO] Mounting shared directory
2025-10-22 01:50:29 (7952): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 01:50:32 (7952): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 01:50:32 (7952): Guest Log: [INFO] Detected branch: prod
2025-10-22 01:50:33 (7952): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 01:50:33 (7952): Guest Log: Copying input files
2025-10-22 01:50:34 (7952): Guest Log: Copied input files into RunAtlas.
2025-10-22 01:50:34 (7952): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-22 01:50:34 (7952): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-22 01:50:34 (7952): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-22 01:50:34 (7952): Guest Log: Further information can be found at the LHC@home message board.
2025-10-22 01:50:39 (7952): Guest Log: 00:00:10.007543 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 764 203 000ns (GuestNow=1 761 112 238 581 583 000 ns GuestLast=1 761 097 826 817 380 000 ns fSetTimeLastLoop=true )
2025-10-22 01:50:42 (7952): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 01:50:42 (7952): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 01:50:42 (7952): Guest Log: 2.6.3.0 1583 0 32208 151983 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-22 01:50:43 (7952): Guest Log: copied the webapp to /var/www
2025-10-22 01:50:43 (7952): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-22 01:50:43 (7952): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-22 01:50:43 (7952): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 01:50:43 (7952): Guest Log:  *** Starting ATLAS job. (PandaID=6853275666 taskID=46771637) ***
2025-10-22 03:30:15 (7952): Status Report: Elapsed Time: '6000.000000'
2025-10-22 03:30:15 (7952): Status Report: CPU Time: '14637.218750'
2025-10-22 05:10:19 (7952): Status Report: Elapsed Time: '12000.000000'
2025-10-22 05:10:19 (7952): Status Report: CPU Time: '30139.406250'
2025-10-22 06:37:03 (7952): Guest Log:  *** Job finished ***
2025-10-22 06:37:03 (7952): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:48,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:52,929 [wrapper] supervise_pilot (15 min periods counter: 20)
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:55,565 | INFO     | [monitor] cgroup control has ended
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:56,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124368660288)>', '<ExcThread(monitor, started 140124079765248)>']
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:57,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:36:57,598 | INFO     | [monitor] control thread has ended
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:01,976 | INFO     | all workflow threads have been joined
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:01,976 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:01,976 | INFO     | traces error code: 0
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:01,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,090 [wrapper] ==== pilot stdout END ====
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,124 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,148 [wrapper] pilotpid: 5980
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,167 [wrapper] Pilot exit status: 0
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,278 [wrapper] pandaids: 6853275666
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,432 [wrapper] cleanup supervisor_pilot 22373 5981
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,461 [wrapper] Test setup, not cleaning
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,492 [wrapper] apfmon messages muted
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,520 [wrapper] ==== wrapper stdout END ====
2025-10-22 06:37:03 (7952): Guest Log: 2025-10-22 10:37:02,537 [wrapper] ==== wrapper stderr END ====
2025-10-22 06:37:03 (7952): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 06:37:03 (7952): Guest Log:     "exeErrorCode": 0,
2025-10-22 06:37:03 (7952): Guest Log:     "exeErrorDiag": "",
2025-10-22 06:37:03 (7952): Guest Log:     "pilotErrorCode": 0,
2025-10-22 06:37:03 (7952): Guest Log:     "pilotErrorDiag": "",
2025-10-22 06:37:03 (7952): Guest Log:  *** Listing of results directory ***
2025-10-22 06:37:03 (7952): Guest Log: total 215712
2025-10-22 06:37:03 (7952): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 22 03:25 queuedata.json
2025-10-22 06:37:03 (7952): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 22 03:25 pilot3.tar.gz
2025-10-22 06:37:03 (7952): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 22 03:27 runpilot2-wrapper.sh
2025-10-22 06:37:03 (7952): Guest Log: -rwxr-xr-x. 1 atlas atlas     15487 Oct 22 05:50 init_data.xml
2025-10-22 06:37:03 (7952): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 22 05:50 input.tar.gz
2025-10-22 06:37:03 (7952): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 05:50 start_atlas.sh
2025-10-22 06:37:03 (7952): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 05:50 EVNT.46771634._003179.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 06:37:03 (7952): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 05:50 pandaJob.out
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas    978464 Oct 22 05:51 agis_schedconf.cvmfs.json
2025-10-22 06:37:03 (7952): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 05:51 pilot3
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas 211686701 Oct 22 10:35 HITS.46771637._079634.pool.root.1
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 22 10:35 memory_monitor_summary.json
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 10:35 agis_ddmendpoints.agis.ALL.json
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas    444510 Oct 22 10:35 log.46771637._079634.job.log.tgz.1
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas      7815 Oct 22 10:36 heartbeat.json
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 10:36 pilot_heartbeat.json
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas      5063 Oct 22 10:37 pilotlog.txt
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas   2236347 Oct 22 10:37 log.46771637._079634.job.log.1
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 10:37 output.list
2025-10-22 06:37:03 (7952): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 10:37 runtime_log
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas   2703360 Oct 22 10:37 result.tar.gz
2025-10-22 06:37:03 (7952): Guest Log: -rw-r--r--. 1 atlas atlas      8610 Oct 22 10:37 runtime_log.err
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas       649 Oct 22 10:37 f4UMDmIgeV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmha4NDmQfTMbn.diag
2025-10-22 06:37:03 (7952): Guest Log: Looking for outputfile HITS.46771637._079634.pool.root.1
2025-10-22 06:37:03 (7952): Guest Log: HITS file was successfully produced
2025-10-22 06:37:03 (7952): Guest Log: -rw-------. 1 atlas atlas 211686701 Oct 22 10:35 /home/atlas/RunAtlas/HITS.46771637._079634.pool.root.1
2025-10-22 06:37:05 (7952): Guest Log: Successfully finished the ATLAS job!
2025-10-22 06:37:05 (7952): Guest Log: Copying the results back to the shared directory!
2025-10-22 06:37:05 (7952): Guest Log:  *** Contents of shared directory: ***
2025-10-22 06:37:06 (7952): Guest Log: total 432172
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root 227541110 Oct 22 05:49 ATLAS.root_0
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root 211686701 Oct 22 10:37 HITS.pool.root.1
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root     15487 Oct 22 05:49 init_data.xml
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 22 05:49 input.tar.gz
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root   2703360 Oct 22 10:37 result.tar.gz
2025-10-22 06:37:06 (7952): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 22 05:49 start_atlas.sh
2025-10-22 06:37:06 (7952): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 06:37:06 (7952): VM Completion File Detected.
2025-10-22 06:37:06 (7952): Powering off VM.
2025-10-22 06:37:07 (7952): Successfully stopped VM.
2025-10-22 06:37:07 (7952): Deregistering VM. (boinc_7cb010db63abbc1a, slot#4)
2025-10-22 06:37:07 (7952): Removing network bandwidth throttle group from VM.
2025-10-22 06:37:07 (7952): Removing VM from VirtualBox.
2025-10-22 06:37:12 (7952): called boinc_finish(0)

</stderr_txt>
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