Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:33:26 (4048): wrapper (7.7.26015): starting
01:33:26 (4048): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 01:33:26] Arguments: --nthreads 8
[2025-10-22 01:33:26] Threads: 8
[2025-10-22 01:33:26] Checking for CVMFS
[2025-10-22 01:33:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 01:33:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 01:33:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 01:33:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 01:33:26] 2.11.2.0 3026 27796 79420 151983 0 56 14233142 20275201 1 130560 0 15690634 99.982 1237286 37058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-22 01:33:26] CVMFS is ok
[2025-10-22 01:33:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 01:33:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 01:33:26] Further information can be found at the LHC@home message board.
[2025-10-22 01:33:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 01:33:26] Checking for apptainer binary...
[2025-10-22 01:33:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 01:33:26] Running /usr/bin/apptainer --version
[2025-10-22 01:33:26] apptainer version 1.3.2-1.el7
[2025-10-22 01:33:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 01:33:28] c-204-25.aglt2.org
[2025-10-22 01:33:28] apptainer works
[2025-10-22 01:33:28] Set ATHENA_PROC_NUMBER=8
[2025-10-22 01:33:28] Set ATHENA_CORE_NUMBER=8
[2025-10-22 01:33:28] Starting ATLAS job with PandaID=6853084924
[2025-10-22 01:33:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 03:52:05]  *** The last 200 lines of the pilot log: ***
[2025-10-22 03:52:05] 2025-10-22 07:51:02,296 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 03:52:05] 2025-10-22 07:51:02,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 03:52:05] 2025-10-22 07:51:02,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 03:52:05] 2025-10-22 07:51:02,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 03:52:05] 2025-10-22 07:51:02,299 | INFO     | fitting pss+swap vs Time
[2025-10-22 03:52:05] 2025-10-22 07:51:02,300 | INFO     | sum of square deviations: 762879420.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,300 | INFO     | sum of deviations: -7847602054.000002
[2025-10-22 03:52:05] 2025-10-22 07:51:02,300 | INFO     | mean x: 1761115344.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,301 | INFO     | mean y: 2511246.8
[2025-10-22 03:52:05] 2025-10-22 07:51:02,301 | INFO     | -- intersect: 18118784970.510258
[2025-10-22 03:52:05] 2025-10-22 07:51:02,301 | INFO     | intersect: 18118784970.510258
[2025-10-22 03:52:05] 2025-10-22 07:51:02,301 | INFO     | chi2: 2.339970730667925
[2025-10-22 03:52:05] 2025-10-22 07:51:02,301 | INFO     | sum of square deviations: 681212772.5
[2025-10-22 03:52:05] 2025-10-22 07:51:02,302 | INFO     | sum of deviations: 1294242947.5000021
[2025-10-22 03:52:05] 2025-10-22 07:51:02,302 | INFO     | mean x: 1761115191.5
[2025-10-22 03:52:05] 2025-10-22 07:51:02,302 | INFO     | mean y: 2527816.869230769
[2025-10-22 03:52:05] 2025-10-22 07:51:02,302 | INFO     | -- intersect: -3343432517.915876
[2025-10-22 03:52:05] 2025-10-22 07:51:02,303 | INFO     | intersect: -3343432517.915876
[2025-10-22 03:52:05] 2025-10-22 07:51:02,303 | INFO     | chi2: 1.5794678987339077
[2025-10-22 03:52:05] 2025-10-22 07:51:02,303 | INFO     | current chi2=1.5794678987339077 (change=32.500527547920996 %)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,303 | INFO     | sum of square deviations: 605592750.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,304 | INFO     | sum of deviations: 1316422333.9999998
[2025-10-22 03:52:05] 2025-10-22 07:51:02,304 | INFO     | mean x: 1761115039.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,304 | INFO     | mean y: 2527861.624
[2025-10-22 03:52:05] 2025-10-22 07:51:02,304 | INFO     | -- intersect: -3825739848.12464
[2025-10-22 03:52:05] 2025-10-22 07:51:02,304 | INFO     | intersect: -3825739848.12464
[2025-10-22 03:52:05] 2025-10-22 07:51:02,305 | INFO     | chi2: 1.5802018904818433
[2025-10-22 03:52:05] 2025-10-22 07:51:02,305 | INFO     | current chi2=1.5802018904818433 (change=-0.046470824036627195 %)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,305 | INFO     | right removable region: 124
[2025-10-22 03:52:05] 2025-10-22 07:51:02,305 | INFO     | sum of square deviations: 681212772.5
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | sum of deviations: -27516691970.999996
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | mean x: 1761115496.5
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | mean y: 2547332.107692308
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | -- intersect: 71140486312.1717
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | intersect: 71140486312.1717
[2025-10-22 03:52:05] 2025-10-22 07:51:02,306 | INFO     | chi2: 0.9291156663407791
[2025-10-22 03:52:05] 2025-10-22 07:51:02,307 | INFO     | current chi2=0.9291156663407791 (change=60.2937056364132 %)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,307 | INFO     | sum of square deviations: 605592750.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,307 | INFO     | sum of deviations: -25316402756.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | mean x: 1761115649.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | mean y: 2542808.544
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | -- intersect: 73624813005.76538
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | intersect: 73624813005.76538
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | chi2: 0.9194967372107846
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | current chi2=0.9194967372107846 (change=1.0352778968712923 %)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,308 | INFO     | left removable region: 20
[2025-10-22 03:52:05] 2025-10-22 07:51:02,309 | INFO     | sum of square deviations: 348769330.0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,309 | INFO     | sum of deviations: -8420951698.500001
[2025-10-22 03:52:05] 2025-10-22 07:51:02,309 | INFO     | mean x: 1761115618.5
[2025-10-22 03:52:05] 2025-10-22 07:51:02,309 | INFO     | mean y: 2544441.105769231
[2025-10-22 03:52:05] 2025-10-22 07:51:02,309 | INFO     | -- intersect: 42524258030.034164
[2025-10-22 03:52:05] 2025-10-22 07:51:02,310 | INFO     | intersect: 42524258030.034164
[2025-10-22 03:52:05] 2025-10-22 07:51:02,310 | INFO     | chi2: 0.09713173123975163
[2025-10-22 03:52:05] 2025-10-22 07:51:02,310 | INFO     | -- intersect: 42524258030.034164
[2025-10-22 03:52:05] 2025-10-22 07:51:02,310 | INFO     | current memory leak: -24.14 B/s (using 104 data points, chi2=0.10)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,310 | INFO     | could have reported an average CPU frequency of 1995 MHz (8 samples)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | ..............................
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . Timing measurements:
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . get job = 0 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . initial setup = 2 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . payload setup = 8 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . stage-in = 0 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . payload execution = 8199 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,311 | INFO     | . stage-out = 0 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,312 | INFO     | . log creation = 0 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,312 | INFO     | ..............................
[2025-10-22 03:52:05] 2025-10-22 07:51:02,405 | INFO     | 
[2025-10-22 03:52:05] 2025-10-22 07:51:02,405 | INFO     | job summary report
[2025-10-22 03:52:05] 2025-10-22 07:51:02,405 | INFO     | --------------------------------------------------
[2025-10-22 03:52:05] 2025-10-22 07:51:02,406 | INFO     | PanDA job id: 6853084924
[2025-10-22 03:52:05] 2025-10-22 07:51:02,406 | INFO     | task id: 46771637
[2025-10-22 03:52:05] 2025-10-22 07:51:02,406 | INFO     | errors: (none)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | pilot state: finished 
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | transexitcode: 0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | exeerrorcode: 0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | exeerrordiag: 
[2025-10-22 03:52:05] 2025-10-22 07:51:02,407 | INFO     | exitcode: 0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,408 | INFO     | exitmsg: OK
[2025-10-22 03:52:05] 2025-10-22 07:51:02,408 | INFO     | cpuconsumptiontime: 61327 s
[2025-10-22 03:52:05] 2025-10-22 07:51:02,408 | INFO     | nevents: 400
[2025-10-22 03:52:05] 2025-10-22 07:51:02,408 | INFO     | neventsw: 0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,408 | INFO     | pid: 14281
[2025-10-22 03:52:05] 2025-10-22 07:51:02,409 | INFO     | pgrp: 14281
[2025-10-22 03:52:05] 2025-10-22 07:51:02,409 | INFO     | corecount: 8
[2025-10-22 03:52:05] 2025-10-22 07:51:02,409 | INFO     | event service: False
[2025-10-22 03:52:05] 2025-10-22 07:51:02,409 | INFO     | sizes: {0: 2348926, 6: 2349188, 11: 2349216, 8210: 2376984, 8211: 2376983, 8212: 2386037, 8213: 2386221, 8218: 2386415}
[2025-10-22 03:52:05] 2025-10-22 07:51:02,409 | INFO     | --------------------------------------------------
[2025-10-22 03:52:05] 2025-10-22 07:51:02,410 | INFO     | 
[2025-10-22 03:52:05] 2025-10-22 07:51:02,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-22 03:52:05] 2025-10-22 07:51:02,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,440 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 03:52:05] 2025-10-22 07:51:02,444 | INFO     | job 6853084924 has completed (purged errors)
[2025-10-22 03:52:05] 2025-10-22 07:51:02,444 | INFO     | overall cleanup function is called
[2025-10-22 03:52:05] 2025-10-22 07:51:03,453 | INFO     | --- collectZombieJob: --- 10, [14281]
[2025-10-22 03:52:05] 2025-10-22 07:51:03,453 | INFO     | zombie collector waiting for pid 14281
[2025-10-22 03:52:05] 2025-10-22 07:51:03,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 03:52:05] 2025-10-22 07:51:03,454 | INFO     | collected zombie processes
[2025-10-22 03:52:05] 2025-10-22 07:51:03,454 | INFO     | will attempt to kill all subprocesses of pid=14281
[2025-10-22 03:52:05] 2025-10-22 07:51:03,549 | INFO     | process IDs to be killed: [14281] (in reverse order)
[2025-10-22 03:52:05] 2025-10-22 07:51:03,606 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 03:52:05] 2025-10-22 07:51:03,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 03:52:05] 2025-10-22 07:51:03,612 | INFO     | did not find any defunct processes belonging to 14281
[2025-10-22 03:52:05] 2025-10-22 07:51:03,616 | INFO     | did not find any defunct processes belonging to 14281
[2025-10-22 03:52:05] 2025-10-22 07:51:03,616 | INFO     | ready for new job
[2025-10-22 03:52:05] 2025-10-22 07:51:03,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 03:52:05] 2025-10-22 07:51:03,618 | INFO     | ***************************************
[2025-10-22 03:52:05] 2025-10-22 07:51:03,619 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 03:52:05] 2025-10-22 07:51:03,619 | INFO     | ***************************************
[2025-10-22 03:52:05] 2025-10-22 07:51:03,619 | INFO     | 
[2025-10-22 03:52:05] 2025-10-22 07:51:03,619 | INFO     | architecture information:
[2025-10-22 03:52:05] 2025-10-22 07:51:03,620 | INFO     | executing command: cat /etc/os-release
[2025-10-22 03:52:05] 2025-10-22 07:51:03,638 | INFO     | cat /etc/os-release:
[2025-10-22 03:52:05] NAME="CentOS Linux"
[2025-10-22 03:52:05] VERSION="7 (Core)"
[2025-10-22 03:52:05] ID="centos"
[2025-10-22 03:52:05] ID_LIKE="rhel fedora"
[2025-10-22 03:52:05] VERSION_ID="7"
[2025-10-22 03:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 03:52:05] ANSI_COLOR="0;31"
[2025-10-22 03:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 03:52:05] HOME_URL="https://www.centos.org/"
[2025-10-22 03:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 03:52:05] 
[2025-10-22 03:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 03:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 03:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 03:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 03:52:05] 
[2025-10-22 03:52:05] 2025-10-22 07:51:03,639 | INFO     | ***************************************
[2025-10-22 03:52:05] 2025-10-22 07:51:04,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-22 03:52:05] 2025-10-22 07:51:04,164 | INFO     | sufficient remaining disk space (18530435072 B)
[2025-10-22 03:52:05] 2025-10-22 07:51:04,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 03:52:05] 2025-10-22 07:51:04,165 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 03:52:05] 2025-10-22 07:51:04,166 | INFO     | update_server=False
[2025-10-22 03:52:05] 2025-10-22 07:51:04,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 03:52:05] 2025-10-22 07:51:04,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 03:52:05] 2025-10-22 07:51:04,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 03:52:05] 2025-10-22 07:51:04,167 | INFO     | aborting loop
[2025-10-22 03:52:05] 2025-10-22 07:51:04,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 03:52:05] 2025-10-22 07:51:04,363 | INFO     | all job control threads have been joined
[2025-10-22 03:52:05] 2025-10-22 07:51:04,574 | INFO     | all data control threads have been joined
[2025-10-22 03:52:05] 2025-10-22 07:51:04,680 | INFO     | all payload control threads have been joined
[2025-10-22 03:52:05] 2025-10-22 07:51:05,172 | INFO     | [job] retrieve thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,173 | INFO     | [job] queue monitor thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,173 | INFO     | [job] job monitor thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,322 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,368 | INFO     | [job] control thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,415 | INFO     | [payload] validate_post thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,579 | INFO     | [data] control thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,683 | INFO     | [payload] control thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:05,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,363 | INFO     | [data] copytool_out thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,434 | INFO     | [payload] failed_post thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,476 | INFO     | [data] copytool_in thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,566 | INFO     | [job] validate thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:06,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 03:52:05] 2025-10-22 07:51:10,952 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 03:52:05] 2025-10-22 07:51:35,054 | INFO     | PID=7808 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-22 03:52:05] 2025-10-22 07:51:35,054 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 03:52:05] 2025-10-22 07:51:35,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 03:52:05] 2025-10-22 07:51:35,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 03:52:05] 2025-10-22 07:51:59,299 | INFO     | [monitor] cgroup control has ended
[2025-10-22 03:52:05] 2025-10-22 07:52:00,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689240033088)>', '<ExcThread(monitor, started 139688492914432)>']
[2025-10-22 03:52:05] 2025-10-22 07:52:01,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 03:52:05] 2025-10-22 07:52:01,176 | INFO     | [monitor] control thread has ended
[2025-10-22 03:52:05] 2025-10-22 07:52:05,326 | INFO     | all workflow threads have been joined
[2025-10-22 03:52:05] 2025-10-22 07:52:05,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 03:52:05] 2025-10-22 07:52:05,327 | INFO     | traces error code: 0
[2025-10-22 03:52:05] 2025-10-22 07:52:05,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 03:52:05] 2025-10-22 07:52:05,445 [wrapper] ==== pilot stdout END ====
[2025-10-22 03:52:05] 2025-10-22 07:52:05,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 03:52:05] 2025-10-22 07:52:05,454 [wrapper] pilotpid: 7808
[2025-10-22 03:52:05] 2025-10-22 07:52:05,458 [wrapper] Pilot exit status: 0
[2025-10-22 03:52:05] 2025-10-22 07:52:05,478 [wrapper] pandaids: 6853084924
[2025-10-22 03:52:05] 2025-10-22 07:52:05,530 [wrapper] cleanup supervisor_pilot 31901 7809
[2025-10-22 03:52:05] 2025-10-22 07:52:05,535 [wrapper] Test setup, not cleaning
[2025-10-22 03:52:05] 2025-10-22 07:52:05,540 [wrapper] apfmon messages muted
[2025-10-22 03:52:05] 2025-10-22 07:52:05,545 [wrapper] ==== wrapper stdout END ====
[2025-10-22 03:52:05] 2025-10-22 07:52:05,549 [wrapper] ==== wrapper stderr END ====
[2025-10-22 03:52:05]  *** Error codes and diagnostics ***
[2025-10-22 03:52:05]     "exeErrorCode": 0,
[2025-10-22 03:52:05]     "exeErrorDiag": "",
[2025-10-22 03:52:05]     "pilotErrorCode": 0,
[2025-10-22 03:52:05]     "pilotErrorDiag": "",
[2025-10-22 03:52:05]  *** Listing of results directory ***
[2025-10-22 03:52:05] total 428660
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 10:25 pilot3.tar.gz
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 10:53 queuedata.json
[2025-10-22 03:52:05] -rwx------ 1 boincer umatlas     36292 Oct 21 10:53 runpilot2-wrapper.sh
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas       100 Oct 22 01:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 03:52:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 22 01:33 run_atlas
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas       105 Oct 22 01:33 job.xml
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas 225713502 Oct 22 01:33 EVNT.46771634._002766.pool.root.1
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 01:33 start_atlas.sh
[2025-10-22 03:52:05] drwxrwx--x 2 boincer umatlas      4096 Oct 22 01:33 shared
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas    569678 Oct 22 01:33 input.tar.gz
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas         0 Oct 22 01:33 boinc_lockfile
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas      2558 Oct 22 01:33 pandaJob.out
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas    978464 Oct 22 01:33 agis_schedconf.cvmfs.json
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas   1560740 Oct 22 01:33 agis_ddmendpoints.agis.ALL.json
[2025-10-22 03:52:05] drwx------ 5 boincer umatlas      4096 Oct 22 01:33 pilot3
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas      5910 Oct 22 03:45 init_data.xml
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas 206314712 Oct 22 03:50 HITS.46771637._069589.pool.root.1
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas       529 Oct 22 03:50 boinc_task_state.xml
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas        95 Oct 22 03:50 pilot_heartbeat.json
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas      1051 Oct 22 03:50 memory_monitor_summary.json
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas    360031 Oct 22 03:50 log.46771637._069589.job.log.tgz.1
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas      7848 Oct 22 03:51 heartbeat.json
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas        27 Oct 22 03:51 wrapper_checkpoint.txt
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 22 03:51 boinc_mmap_file
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas      4745 Oct 22 03:52 pilotlog.txt
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas   1151250 Oct 22 03:52 log.46771637._069589.job.log.1
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas       357 Oct 22 03:52 output.list
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas       620 Oct 22 03:52 runtime_log
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas   1525760 Oct 22 03:52 result.tar.gz
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas      8703 Oct 22 03:52 runtime_log.err
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas       660 Oct 22 03:52 5z6LDmsuSV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmekfMDm1o8knm.diag
[2025-10-22 03:52:05] -rw-r--r-- 1 boincer umatlas     20851 Oct 22 03:52 stderr.txt
[2025-10-22 03:52:05] HITS file was successfully produced:
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas 206314712 Oct 22 03:50 shared/HITS.pool.root.1
[2025-10-22 03:52:05]  *** Contents of shared directory: ***
[2025-10-22 03:52:05] total 423976
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas 225713502 Oct 22 01:33 ATLAS.root_0
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 22 01:33 start_atlas.sh
[2025-10-22 03:52:05] -rw-r--r-- 2 boincer umatlas    569678 Oct 22 01:33 input.tar.gz
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas 206314712 Oct 22 03:50 HITS.pool.root.1
[2025-10-22 03:52:05] -rw------- 1 boincer umatlas   1525760 Oct 22 03:52 result.tar.gz
03:52:07 (4048): run_atlas exited; CPU time 61278.864619
03:52:07 (4048): called boinc_finish(0)

</stderr_txt>
]]>

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