Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:07 (2747141): wrapper (7.7.26015): starting
21:46:07 (2747141): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 21:46:07] Arguments: --nthreads 8
[2025-10-21 21:46:07] Threads: 8
[2025-10-21 21:46:07] Checking for CVMFS
[2025-10-21 21:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 21:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 21:46:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 21:46:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 21:46:07] 2.11.3.0 2241 45065 229300 151982 2 466 32592252 45568000 6017 130560 0 317428206 99.894 98066204 26062 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-21 21:46:07] CVMFS is ok
[2025-10-21 21:46:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 21:46:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 21:46:07] Further information can be found at the LHC@home message board.
[2025-10-21 21:46:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 21:46:07] Checking for apptainer binary...
[2025-10-21 21:46:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 21:46:07] Running /usr/bin/apptainer --version
[2025-10-21 21:46:07] apptainer version 1.4.1-1.el9
[2025-10-21 21:46:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 21:46:08] wns0006.triumf.lcg
[2025-10-21 21:46:08] apptainer works
[2025-10-21 21:46:08] Set ATHENA_PROC_NUMBER=8
[2025-10-21 21:46:08] Set ATHENA_CORE_NUMBER=8
[2025-10-21 21:46:08] Starting ATLAS job with PandaID=6853254783
[2025-10-21 21:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 21:49:32]  *** The last 200 lines of the pilot log: ***
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . Timing measurements:
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . get job = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . initial setup = 2 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload setup = 4 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-in = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload execution = 16 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-out = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . log creation = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 21:49:32] 2025-10-22 04:48:59,135 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853254783/pilotlog.txt
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | monitor loop #54: job 0:6853254783 is in state 'failed'
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,147 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-21 21:49:32] - Log from pilotlog.txt -
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | found no stored workdir sizes
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | INFO     | will not add max space = 0 B to job metrics
[2025-10-21 21:49:32] 2025-10-22 04:48:59,133 | WARNING  | wrong length of table data, x=[1761108401.0], y=[903.0] (must be same and length>=4)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,133 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . Timing measurements:
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . get job = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . initial setup = 2 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload setup = 4 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-in = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload execution = 16 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-out = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . log creation = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 21:49:32] 2025-10-22 04:48:59,135 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853254783/pilotlog.txt
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | monitor loop #54: job 0:6853254783 is in state 'failed'
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,148 | WARNING  | 
[2025-10-21 21:49:32] [begin log extracts]
[2025-10-21 21:49:32] - Log from pilotlog.txt -
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | WARNING  | found no stored workdir sizes
[2025-10-21 21:49:32] 2025-10-22 04:48:59,132 | INFO     | will not add max space = 0 B to job metrics
[2025-10-21 21:49:32] 2025-10-22 04:48:59,133 | WARNING  | wrong length of table data, x=[1761108401.0], y=[903.0] (must be same and length>=4)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,133 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . Timing measurements:
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . get job = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . initial setup = 2 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload setup = 4 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-in = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . payload execution = 16 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . stage-out = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | . log creation = 0 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | ..............................
[2025-10-21 21:49:32] 2025-10-22 04:48:59,134 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 21:49:32] 2025-10-22 04:48:59,135 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853254783/pilotlog.txt
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | monitor loop #54: job 0:6853254783 is in state 'failed'
[2025-10-21 21:49:32] 2025-10-22 04:48:59,139 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-21 21:49:32] [end log extracts]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,148 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,148 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-21 21:49:32] 2025-10-22 04:48:59,204 | INFO     | time since job start (162s) is within the limit (172800.0s)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,554 | INFO     | 
[2025-10-21 21:49:32] 2025-10-22 04:48:59,554 | INFO     | job summary report
[2025-10-21 21:49:32] 2025-10-22 04:48:59,554 | INFO     | --------------------------------------------------
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | PanDA job id: 6853254783
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | task id: 46771637
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-21 21:46:49,592 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | pilot state: failed 
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | transexitcode: 65
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | exeerrorcode: 65
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | exitcode: 65
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | cpuconsumptiontime: 19 s
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | nevents: 0
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | neventsw: 0
[2025-10-21 21:49:32] 2025-10-22 04:48:59,555 | INFO     | pid: 2757270
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | pgrp: 2757270
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | corecount: 8
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | event service: False
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | sizes: {0: 2348928, 1: 2348928, 4: 2349218, 11: 2349246, 24: 2376712, 28: 2376712, 147: 2377006}
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | --------------------------------------------------
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | 
[2025-10-21 21:49:32] 2025-10-22 04:48:59,556 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-21 21:49:32] 2025-10-22 04:48:59,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | job 6853254783 has completed (purged errors)
[2025-10-21 21:49:32] 2025-10-22 04:48:59,573 | INFO     | overall cleanup function is called
[2025-10-21 21:49:32] 2025-10-22 04:49:00,579 | INFO     | --- collectZombieJob: --- 10, [2757270]
[2025-10-21 21:49:32] 2025-10-22 04:49:00,579 | INFO     | zombie collector waiting for pid 2757270
[2025-10-21 21:49:32] 2025-10-22 04:49:00,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 21:49:32] 2025-10-22 04:49:00,580 | INFO     | collected zombie processes
[2025-10-21 21:49:32] 2025-10-22 04:49:00,580 | INFO     | will attempt to kill all subprocesses of pid=2757270
[2025-10-21 21:49:32] 2025-10-22 04:49:00,703 | INFO     | process IDs to be killed: [2757270] (in reverse order)
[2025-10-21 21:49:32] 2025-10-22 04:49:00,747 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 21:49:32] 2025-10-22 04:49:00,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 21:49:32] 2025-10-22 04:49:00,752 | INFO     | did not find any defunct processes belonging to 2757270
[2025-10-21 21:49:32] 2025-10-22 04:49:00,757 | INFO     | did not find any defunct processes belonging to 2757270
[2025-10-21 21:49:32] 2025-10-22 04:49:00,757 | INFO     | ready for new job
[2025-10-21 21:49:32] 2025-10-22 04:49:00,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 21:49:32] 2025-10-22 04:49:00,758 | INFO     | ***************************************
[2025-10-21 21:49:32] 2025-10-22 04:49:00,758 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 21:49:32] 2025-10-22 04:49:00,759 | INFO     | ***************************************
[2025-10-21 21:49:32] 2025-10-22 04:49:00,759 | INFO     | 
[2025-10-21 21:49:32] 2025-10-22 04:49:00,760 | INFO     | architecture information:
[2025-10-21 21:49:32] 2025-10-22 04:49:00,761 | INFO     | executing command: cat /etc/os-release
[2025-10-21 21:49:32] 2025-10-22 04:49:00,772 | INFO     | cat /etc/os-release:
[2025-10-21 21:49:32] NAME="CentOS Linux"
[2025-10-21 21:49:32] VERSION="7 (Core)"
[2025-10-21 21:49:32] ID="centos"
[2025-10-21 21:49:32] ID_LIKE="rhel fedora"
[2025-10-21 21:49:32] VERSION_ID="7"
[2025-10-21 21:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 21:49:32] ANSI_COLOR="0;31"
[2025-10-21 21:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 21:49:32] HOME_URL="https://www.centos.org/"
[2025-10-21 21:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 21:49:32] 
[2025-10-21 21:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 21:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 21:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 21:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 21:49:32] 
[2025-10-21 21:49:32] 2025-10-22 04:49:00,773 | INFO     | ***************************************
[2025-10-21 21:49:32] 2025-10-22 04:49:01,274 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-21 21:49:32] 2025-10-22 04:49:01,289 | INFO     | sufficient remaining disk space (1359888777216 B)
[2025-10-21 21:49:32] 2025-10-22 04:49:01,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 21:49:32] 2025-10-22 04:49:01,290 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 21:49:32] 2025-10-22 04:49:01,290 | INFO     | update_server=False
[2025-10-21 21:49:32] 2025-10-22 04:49:01,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 21:49:32] 2025-10-22 04:49:01,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 21:49:32] 2025-10-22 04:49:01,646 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 21:49:32] 2025-10-22 04:49:01,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 21:49:32] 2025-10-22 04:49:01,647 | INFO     | will abort loop
[2025-10-21 21:49:32] 2025-10-22 04:49:02,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 21:49:32] 2025-10-22 04:49:02,274 | INFO     | all job control threads have been joined
[2025-10-21 21:49:32] 2025-10-22 04:49:02,295 | INFO     | [job] retrieve thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,302 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,333 | INFO     | all payload control threads have been joined
[2025-10-21 21:49:32] 2025-10-22 04:49:02,386 | INFO     | all data control threads have been joined
[2025-10-21 21:49:32] 2025-10-22 04:49:02,470 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,651 | INFO     | [job] job monitor thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,753 | INFO     | [payload] validate_post thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:02,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 21:49:32] 2025-10-22 04:49:03,233 | INFO     | [data] copytool_in thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,279 | INFO     | [job] control thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,338 | INFO     | [payload] control thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,369 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,392 | INFO     | [data] control thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,655 | INFO     | [job] validate thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:03,878 | INFO     | [payload] failed_post thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:04,215 | INFO     | [data] copytool_out thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:04,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 21:49:32] 2025-10-22 04:49:05,241 | INFO     | [job] queue monitor thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:06,799 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 21:49:32] 2025-10-22 04:49:16,816 | INFO     | [monitor] cgroup control has ended
[2025-10-21 21:49:32] 2025-10-22 04:49:17,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630306006848)>', '<ExcThread(monitor, started 139629630048000)>']
[2025-10-21 21:49:32] 2025-10-22 04:49:22,086 | INFO     | all workflow threads have been joined
[2025-10-21 21:49:32] 2025-10-22 04:49:22,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 21:49:32] 2025-10-22 04:49:22,087 | INFO     | traces error code: 0
[2025-10-21 21:49:32] 2025-10-22 04:49:22,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 21:49:32] 2025-10-22 04:49:32,443 | INFO     | PID=2750787 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 21:49:32] 2025-10-22 04:49:32,444 | INFO     | .. there are 6 such processes running
[2025-10-21 21:49:32] 2025-10-22 04:49:32,445 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 21:49:32] 2025-10-22 04:49:32,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 21:49:32] 2025-10-22 04:49:32,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 21:49:32] 2025-10-22 04:49:32,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 21:49:32] 2025-10-22 04:49:32,445 | INFO     | [monitor] control thread has ended
[2025-10-21 21:49:32] 2025-10-22 04:49:32,600 [wrapper] ==== pilot stdout END ====
[2025-10-21 21:49:32] 2025-10-22 04:49:32,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 21:49:32] 2025-10-22 04:49:32,605 [wrapper] pilotpid: 2750787
[2025-10-21 21:49:32] 2025-10-22 04:49:32,608 [wrapper] Pilot exit status: 0
[2025-10-21 21:49:32] 2025-10-22 04:49:32,617 [wrapper] pandaids: 6853254783
[2025-10-21 21:49:32] 2025-10-22 04:49:32,649 [wrapper] cleanup supervisor_pilot 2750793 2750788
[2025-10-21 21:49:32] 2025-10-22 04:49:32,652 [wrapper] Test setup, not cleaning
[2025-10-21 21:49:32] 2025-10-22 04:49:32,655 [wrapper] apfmon messages muted
[2025-10-21 21:49:32] 2025-10-22 04:49:32,657 [wrapper] ==== wrapper stdout END ====
[2025-10-21 21:49:32] 2025-10-22 04:49:32,660 [wrapper] ==== wrapper stderr END ====
[2025-10-21 21:49:32]  *** Error codes and diagnostics ***
[2025-10-21 21:49:32]     "exeErrorCode": 65,
[2025-10-21 21:49:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-21 21:49:32]     "pilotErrorCode": 1305,
[2025-10-21 21:49:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-21 21:49:32]  *** Listing of results directory ***
[2025-10-21 21:49:32] total 227664
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc    557409 Oct 21 19:24 pilot3.tar.gz
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc      5112 Oct 21 19:34 queuedata.json
[2025-10-21 21:49:32] -rwx------. 1 boinc boinc     36292 Oct 21 19:35 runpilot2-wrapper.sh
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc       100 Oct 21 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 21:49:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 21 21:46 run_atlas
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc       105 Oct 21 21:46 job.xml
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc      6443 Oct 21 21:46 init_data.xml
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc 229016031 Oct 21 21:46 EVNT.46771634._003154.pool.root.1
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc     15120 Oct 21 21:46 start_atlas.sh
[2025-10-21 21:49:32] drwxrwx--x. 2 boinc boinc      4096 Oct 21 21:46 shared
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc    569679 Oct 21 21:46 input.tar.gz
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc         0 Oct 21 21:46 boinc_lockfile
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc      2560 Oct 21 21:46 pandaJob.out
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc    978456 Oct 21 21:46 agis_schedconf.cvmfs.json
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc   1560740 Oct 21 21:46 agis_ddmendpoints.agis.ALL.json
[2025-10-21 21:49:32] drwx------. 5 boinc boinc      4096 Oct 21 21:46 pilot3
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc       954 Oct 21 21:46 memory_monitor_summary.json
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc     21130 Oct 21 21:46 log.46771637._079044.job.log.tgz.1
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc       522 Oct 21 21:47 boinc_task_state.xml
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc      8366 Oct 21 21:48 heartbeat.json
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc      8192 Oct 21 21:49 boinc_mmap_file
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc        22 Oct 21 21:49 wrapper_checkpoint.txt
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc        95 Oct 21 21:49 pilot_heartbeat.json
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc       822 Oct 21 21:49 pilotlog.txt
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc     82656 Oct 21 21:49 log.46771637._079044.job.log.1
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc       188 Oct 21 21:49 output.list
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc       620 Oct 21 21:49 runtime_log
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc    122880 Oct 21 21:49 result.tar.gz
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc       645 Oct 21 21:49 ZJqMDmWsdV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZogMDmBi9fBn.diag
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc      8526 Oct 21 21:49 runtime_log.err
[2025-10-21 21:49:32] -rw-r--r--. 1 boinc boinc     21747 Oct 21 21:49 stderr.txt
[2025-10-21 21:49:32] No HITS result produced
[2025-10-21 21:49:32]  *** Contents of shared directory: ***
[2025-10-21 21:49:32] total 224352
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc 229016031 Oct 21 21:46 ATLAS.root_0
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc     15120 Oct 21 21:46 start_atlas.sh
[2025-10-21 21:49:32] -rw-r--r--. 2 boinc boinc    569679 Oct 21 21:46 input.tar.gz
[2025-10-21 21:49:32] -rw-------. 1 boinc boinc    122880 Oct 21 21:49 result.tar.gz
21:49:34 (2747141): run_atlas exited; CPU time 23.351502
21:49:34 (2747141): called boinc_finish(0)

</stderr_txt>
]]>

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