Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:19:40 (984233): wrapper (7.7.26015): starting
02:19:40 (984233): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 02:19:40] Arguments: --nthreads 8
[2025-10-22 02:19:40] Threads: 8
[2025-10-22 02:19:40] Checking for CVMFS
[2025-10-22 02:19:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 02:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 02:19:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 02:19:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 02:19:41] 2.13.2.0 2624825 143275 320916 151985 1 135 23865503 40960001 15008 16776704 0 231257814 99.677 201028401 30487 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-22 02:19:41] CVMFS is ok
[2025-10-22 02:19:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 02:19:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 02:19:41] Further information can be found at the LHC@home message board.
[2025-10-22 02:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 02:19:41] Checking for apptainer binary...
[2025-10-22 02:19:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 02:19:41] Running /usr/bin/apptainer --version
[2025-10-22 02:19:41] apptainer version 1.4.3-1.el9
[2025-10-22 02:19:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 02:19:41] c6-8-12-1.aglt2.org
[2025-10-22 02:19:41] apptainer works
[2025-10-22 02:19:41] Set ATHENA_PROC_NUMBER=8
[2025-10-22 02:19:41] Set ATHENA_CORE_NUMBER=8
[2025-10-22 02:19:42] Starting ATLAS job with PandaID=6853226817
[2025-10-22 02:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 05:47:42]  *** The last 200 lines of the pilot log: ***
[2025-10-22 05:47:42] 2025-10-22 09:46:52,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 05:47:42] 2025-10-22 09:46:52,437 | INFO     | fitting pss+swap vs Time
[2025-10-22 05:47:42] 2025-10-22 09:46:52,438 | INFO     | sum of square deviations: 2555940879.9059486
[2025-10-22 05:47:42] 2025-10-22 09:46:52,439 | INFO     | sum of deviations: -91474957801.0396
[2025-10-22 05:47:42] 2025-10-22 09:46:52,440 | INFO     | mean x: 1761120199.1237624
[2025-10-22 05:47:42] 2025-10-22 09:46:52,440 | INFO     | mean y: 2277982.8415841586
[2025-10-22 05:47:42] 2025-10-22 09:46:52,440 | INFO     | -- intersect: 63031277269.91922
[2025-10-22 05:47:42] 2025-10-22 09:46:52,440 | INFO     | intersect: 63031277269.91922
[2025-10-22 05:47:42] 2025-10-22 09:46:52,440 | INFO     | chi2: 2.9769165297840883
[2025-10-22 05:47:42] 2025-10-22 09:46:52,441 | INFO     | sum of square deviations: 2370789128.680196
[2025-10-22 05:47:42] 2025-10-22 09:46:52,442 | INFO     | sum of deviations: -75174524701.2995
[2025-10-22 05:47:42] 2025-10-22 09:46:52,442 | INFO     | mean x: 1761120046.6142132
[2025-10-22 05:47:42] 2025-10-22 09:46:52,442 | INFO     | mean y: 2291215.035532995
[2025-10-22 05:47:42] 2025-10-22 09:46:52,442 | INFO     | -- intersect: 55845031863.94992
[2025-10-22 05:47:42] 2025-10-22 09:46:52,442 | INFO     | intersect: 55845031863.94992
[2025-10-22 05:47:42] 2025-10-22 09:46:52,451 | INFO     | chi2: 2.1459139254808437
[2025-10-22 05:47:42] 2025-10-22 09:46:52,451 | INFO     | current chi2=2.1459139254808437 (change=27.914877558341082 %)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,451 | INFO     | sum of square deviations: 2194799733.91666
[2025-10-22 05:47:42] 2025-10-22 09:46:52,452 | INFO     | sum of deviations: -71783748897.79167
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | mean x: 1761119894.1041667
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | mean y: 2294156.9895833335
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | -- intersect: 57601985966.53822
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | intersect: 57601985966.53822
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | chi2: 2.1336122551209393
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | current chi2=2.1336122551209393 (change=0.5732601952870913 %)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,453 | INFO     | right removable region: 191
[2025-10-22 05:47:42] 2025-10-22 09:46:52,454 | INFO     | sum of square deviations: 2370773395.4111667
[2025-10-22 05:47:42] 2025-10-22 09:46:52,476 | INFO     | sum of deviations: -121499256912.7462
[2025-10-22 05:47:42] 2025-10-22 09:46:52,476 | INFO     | mean x: 1761120351.6395938
[2025-10-22 05:47:42] 2025-10-22 09:46:52,476 | INFO     | mean y: 2302476.1725888327
[2025-10-22 05:47:42] 2025-10-22 09:46:52,477 | INFO     | -- intersect: 90257581395.82446
[2025-10-22 05:47:42] 2025-10-22 09:46:52,477 | INFO     | intersect: 90257581395.82446
[2025-10-22 05:47:42] 2025-10-22 09:46:52,477 | INFO     | chi2: 1.3434468122179979
[2025-10-22 05:47:42] 2025-10-22 09:46:52,477 | INFO     | current chi2=1.3434468122179979 (change=54.871196461949964 %)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,478 | INFO     | sum of square deviations: 2194768873.3125
[2025-10-22 05:47:42] 2025-10-22 09:46:52,479 | INFO     | sum of deviations: -117987380972.31252
[2025-10-22 05:47:42] 2025-10-22 09:46:52,479 | INFO     | mean x: 1761120504.15625
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | mean y: 2299389.5104166665
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | -- intersect: 94677414563.90381
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | intersect: 94677414563.90381
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | chi2: 1.3111244998796328
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | current chi2=1.3111244998796328 (change=2.4059242274728976 %)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,480 | INFO     | left removable region: 20
[2025-10-22 05:47:42] 2025-10-22 09:46:52,481 | INFO     | sum of square deviations: 1550441108.643275
[2025-10-22 05:47:42] 2025-10-22 09:46:52,482 | INFO     | sum of deviations: -85015092240.74852
[2025-10-22 05:47:42] 2025-10-22 09:46:52,482 | INFO     | mean x: 1761120473.6549706
[2025-10-22 05:47:42] 2025-10-22 09:46:52,482 | INFO     | mean y: 2305157.2923976607
[2025-10-22 05:47:42] 2025-10-22 09:46:52,483 | INFO     | -- intersect: 96569545718.82733
[2025-10-22 05:47:42] 2025-10-22 09:46:52,483 | INFO     | intersect: 96569545718.82733
[2025-10-22 05:47:42] 2025-10-22 09:46:52,483 | INFO     | chi2: 0.40411971903695654
[2025-10-22 05:47:42] 2025-10-22 09:46:52,483 | INFO     | -- intersect: 96569545718.82733
[2025-10-22 05:47:42] 2025-10-22 09:46:52,483 | INFO     | current memory leak: -54.83 B/s (using 171 data points, chi2=0.40)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | could have reported an average CPU frequency of 2666 MHz (10 samples)
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | ..............................
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . Timing measurements:
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . get job = 0 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . initial setup = 4 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . payload setup = 12 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . stage-in = 0 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . payload execution = 12313 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,484 | INFO     | . stage-out = 5 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,485 | INFO     | . log creation = 0 s
[2025-10-22 05:47:42] 2025-10-22 09:46:52,485 | INFO     | ..............................
[2025-10-22 05:47:42] 2025-10-22 09:46:52,926 | INFO     | PID=988915 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 05:47:42] 2025-10-22 09:46:52,926 | INFO     | .. there are 17 such processes running
[2025-10-22 05:47:42] 2025-10-22 09:46:53,050 | INFO     | 
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | job summary report
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | --------------------------------------------------
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | PanDA job id: 6853226817
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | task id: 46771637
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | errors: (none)
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | pilot state: finished 
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | transexitcode: 0
[2025-10-22 05:47:42] 2025-10-22 09:46:53,051 | INFO     | exeerrorcode: 0
[2025-10-22 05:47:42] 2025-10-22 09:46:53,063 | INFO     | exeerrordiag: 
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | exitcode: 0
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | exitmsg: OK
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | cpuconsumptiontime: 47700 s
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | nevents: 400
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | neventsw: 0
[2025-10-22 05:47:42] 2025-10-22 09:46:53,064 | INFO     | pid: 996260
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | pgrp: 996260
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | corecount: 8
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | event service: False
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | sizes: {0: 2348931, 1: 2348931, 12: 2348959, 13: 2349249, 22: 2349305, 12329: 2379232, 12330: 2379359, 12335: 2388413, 12336: 2388469, 12364: 2388663}
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | --------------------------------------------------
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | 
[2025-10-22 05:47:42] 2025-10-22 09:46:53,065 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-22 05:47:42] 2025-10-22 09:46:53,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | job 6853226817 has completed (purged errors)
[2025-10-22 05:47:42] 2025-10-22 09:46:53,116 | INFO     | overall cleanup function is called
[2025-10-22 05:47:42] 2025-10-22 09:46:54,156 | INFO     | --- collectZombieJob: --- 10, [996260]
[2025-10-22 05:47:42] 2025-10-22 09:46:54,157 | INFO     | zombie collector waiting for pid 996260
[2025-10-22 05:47:42] 2025-10-22 09:46:54,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 05:47:42] 2025-10-22 09:46:54,157 | INFO     | collected zombie processes
[2025-10-22 05:47:42] 2025-10-22 09:46:54,157 | INFO     | will attempt to kill all subprocesses of pid=996260
[2025-10-22 05:47:42] 2025-10-22 09:46:54,644 | INFO     | process IDs to be killed: [996260] (in reverse order)
[2025-10-22 05:47:42] 2025-10-22 09:46:54,903 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 05:47:42] 2025-10-22 09:46:54,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 05:47:42] 2025-10-22 09:46:54,923 | INFO     | did not find any defunct processes belonging to 996260
[2025-10-22 05:47:42] 2025-10-22 09:46:54,954 | INFO     | did not find any defunct processes belonging to 996260
[2025-10-22 05:47:42] 2025-10-22 09:46:54,955 | INFO     | ready for new job
[2025-10-22 05:47:42] 2025-10-22 09:46:54,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 05:47:42] 2025-10-22 09:46:54,979 | INFO     | ***************************************
[2025-10-22 05:47:42] 2025-10-22 09:46:54,980 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 05:47:42] 2025-10-22 09:46:54,980 | INFO     | ***************************************
[2025-10-22 05:47:42] 2025-10-22 09:46:54,980 | INFO     | 
[2025-10-22 05:47:42] 2025-10-22 09:46:54,998 | INFO     | architecture information:
[2025-10-22 05:47:42] 2025-10-22 09:46:55,046 | INFO     | executing command: cat /etc/os-release
[2025-10-22 05:47:42] 2025-10-22 09:46:55,098 | INFO     | cat /etc/os-release:
[2025-10-22 05:47:42] NAME="CentOS Linux"
[2025-10-22 05:47:42] VERSION="7 (Core)"
[2025-10-22 05:47:42] ID="centos"
[2025-10-22 05:47:42] ID_LIKE="rhel fedora"
[2025-10-22 05:47:42] VERSION_ID="7"
[2025-10-22 05:47:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 05:47:42] ANSI_COLOR="0;31"
[2025-10-22 05:47:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 05:47:42] HOME_URL="https://www.centos.org/"
[2025-10-22 05:47:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 05:47:42] 
[2025-10-22 05:47:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 05:47:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 05:47:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 05:47:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 05:47:42] 
[2025-10-22 05:47:42] 2025-10-22 09:46:55,098 | INFO     | ***************************************
[2025-10-22 05:47:42] 2025-10-22 09:46:55,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-22 05:47:42] 2025-10-22 09:46:55,775 | INFO     | sufficient remaining disk space (57585696768 B)
[2025-10-22 05:47:42] 2025-10-22 09:46:55,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 05:47:42] 2025-10-22 09:46:55,776 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 05:47:42] 2025-10-22 09:46:55,776 | INFO     | update_server=False
[2025-10-22 05:47:42] 2025-10-22 09:46:55,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 05:47:42] 2025-10-22 09:46:55,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:47:42] 2025-10-22 09:46:55,776 | INFO     | aborting loop
[2025-10-22 05:47:42] 2025-10-22 09:46:55,980 | INFO     | all payload control threads have been joined
[2025-10-22 05:47:42] 2025-10-22 09:46:56,782 | INFO     | [job] retrieve thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,782 | INFO     | [job] job monitor thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,786 | INFO     | all data control threads have been joined
[2025-10-22 05:47:42] 2025-10-22 09:46:56,868 | INFO     | [job] validate thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,868 | INFO     | [data] copytool_in thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,937 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,937 | INFO     | [payload] validate_post thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,937 | INFO     | [payload] failed_post thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:56,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 05:47:42] 2025-10-22 09:46:56,987 | INFO     | [payload] control thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:57,136 | INFO     | all job control threads have been joined
[2025-10-22 05:47:42] 2025-10-22 09:46:57,425 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:57,432 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:57,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:47:42] 2025-10-22 09:46:57,793 | INFO     | [data] control thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:58,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 05:47:42] 2025-10-22 09:46:58,142 | INFO     | [job] control thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:58,769 | INFO     | [job] queue monitor thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:46:58,961 | INFO     | [data] copytool_out thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:47:02,134 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 05:47:42] 2025-10-22 09:47:25,510 | INFO     | PID=988915 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 05:47:42] 2025-10-22 09:47:25,510 | INFO     | .. there are 17 such processes running
[2025-10-22 05:47:42] 2025-10-22 09:47:25,511 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 05:47:42] 2025-10-22 09:47:25,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 05:47:42] 2025-10-22 09:47:25,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 05:47:42] 2025-10-22 09:47:35,894 | INFO     | [monitor] cgroup control has ended
[2025-10-22 05:47:42] 2025-10-22 09:47:36,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187998320448)>', '<ExcThread(monitor, started 140187522819840)>']
[2025-10-22 05:47:42] 2025-10-22 09:47:37,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 05:47:42] 2025-10-22 09:47:37,621 | INFO     | [monitor] control thread has ended
[2025-10-22 05:47:42] 2025-10-22 09:47:41,756 | INFO     | all workflow threads have been joined
[2025-10-22 05:47:42] 2025-10-22 09:47:41,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 05:47:42] 2025-10-22 09:47:41,757 | INFO     | traces error code: 0
[2025-10-22 05:47:42] 2025-10-22 09:47:41,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 05:47:42] 2025-10-22 09:47:42,111 [wrapper] ==== pilot stdout END ====
[2025-10-22 05:47:42] 2025-10-22 09:47:42,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 05:47:42] 2025-10-22 09:47:42,170 [wrapper] pilotpid: 988915
[2025-10-22 05:47:42] 2025-10-22 09:47:42,183 [wrapper] Pilot exit status: 0
[2025-10-22 05:47:42] 2025-10-22 09:47:42,273 [wrapper] pandaids: 6853226817
[2025-10-22 05:47:42] 2025-10-22 09:47:42,383 [wrapper] cleanup supervisor_pilot 1433766 988916
[2025-10-22 05:47:42] 2025-10-22 09:47:42,386 [wrapper] Test setup, not cleaning
[2025-10-22 05:47:42] 2025-10-22 09:47:42,390 [wrapper] apfmon messages muted
[2025-10-22 05:47:42] 2025-10-22 09:47:42,393 [wrapper] ==== wrapper stdout END ====
[2025-10-22 05:47:42] 2025-10-22 09:47:42,396 [wrapper] ==== wrapper stderr END ====
[2025-10-22 05:47:42]  *** Error codes and diagnostics ***
[2025-10-22 05:47:42]     "exeErrorCode": 0,
[2025-10-22 05:47:42]     "exeErrorDiag": "",
[2025-10-22 05:47:42]     "pilotErrorCode": 0,
[2025-10-22 05:47:42]     "pilotErrorDiag": "",
[2025-10-22 05:47:42]  *** Listing of results directory ***
[2025-10-22 05:47:42] total 437088
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 19:28 queuedata.json
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 19:28 pilot3.tar.gz
[2025-10-22 05:47:42] -rwx------. 1 boincer umatlas     36292 Oct 21 19:30 runpilot2-wrapper.sh
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas       100 Oct 22 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 05:47:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 22 02:19 run_atlas
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas       105 Oct 22 02:19 job.xml
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas 229524518 Oct 22 02:19 EVNT.46771634._003059.pool.root.1
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 02:19 start_atlas.sh
[2025-10-22 05:47:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 22 02:19 shared
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas    569679 Oct 22 02:19 input.tar.gz
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas         0 Oct 22 02:19 boinc_lockfile
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas      2560 Oct 22 02:19 pandaJob.out
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas    978464 Oct 22 02:20 agis_schedconf.cvmfs.json
[2025-10-22 05:47:42] drwx------. 5 boincer umatlas      4096 Oct 22 02:20 pilot3
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas 210006865 Oct 22 05:45 HITS.46771637._076876.pool.root.1
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas       531 Oct 22 05:45 boinc_task_state.xml
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas      6842 Oct 22 05:46 init_data.xml
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas      1040 Oct 22 05:46 memory_monitor_summary.json
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas   1560740 Oct 22 05:46 agis_ddmendpoints.agis.ALL.json
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas    432482 Oct 22 05:46 log.46771637._076876.job.log.tgz.1
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas      7833 Oct 22 05:46 heartbeat.json
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas        95 Oct 22 05:47 pilot_heartbeat.json
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 22 05:47 boinc_mmap_file
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas      4823 Oct 22 05:47 pilotlog.txt
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas        28 Oct 22 05:47 wrapper_checkpoint.txt
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas   1641692 Oct 22 05:47 log.46771637._076876.job.log.1
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas       357 Oct 22 05:47 output.list
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas       620 Oct 22 05:47 runtime_log
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas   2088960 Oct 22 05:47 result.tar.gz
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas      8709 Oct 22 05:47 runtime_log.err
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas       655 Oct 22 05:47 5yuKDm9yaV8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8XgMDmp0y9hm.diag
[2025-10-22 05:47:42] -rw-r--r--. 1 boincer umatlas     21121 Oct 22 05:47 stderr.txt
[2025-10-22 05:47:42] HITS file was successfully produced:
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas 210006865 Oct 22 05:45 shared/HITS.pool.root.1
[2025-10-22 05:47:42]  *** Contents of shared directory: ***
[2025-10-22 05:47:42] total 431856
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas 229524518 Oct 22 02:19 ATLAS.root_0
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 22 02:19 start_atlas.sh
[2025-10-22 05:47:42] -rw-r--r--. 2 boincer umatlas    569679 Oct 22 02:19 input.tar.gz
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas 210006865 Oct 22 05:45 HITS.pool.root.1
[2025-10-22 05:47:42] -rw-------. 1 boincer umatlas   2088960 Oct 22 05:47 result.tar.gz
05:47:44 (984233): run_atlas exited; CPU time 48051.731401
05:47:44 (984233): called boinc_finish(0)

</stderr_txt>
]]>

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